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UniProtKB/Swiss-Prot entry Q8RUN1

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ACA3_ORYSJ
Primary accession number Q8RUN1
Secondary accession numbers None
Integrated into Swiss-Prot on July 25, 2006
Sequence was last modified on June 1, 2002 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 45)
Name and origin of the protein
Protein name Calcium-transporting ATPase 3, plasma membrane-type
Synonyms EC 3.6.3.8
Ca(2+)-ATPase isoform 3
Gene name
OrderedLocusNames: Os01g0939100, LOC_Os01g71240
ORFNames: B1150F11.11, P0504E02.35
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 2: Evidence at transcript level;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature01184; PubMed=12447438 [NCBI, ExPASy, EBI, Israel, Japan]
Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M., Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
"The genome sequence and structure of rice chromosome 1.";
Nature 420:312-316(2002).
[2]
 NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Nipponbare;
DOI=10.1126/science.1081288; PubMed=12869764 [NCBI, ExPASy, EBI, Israel, Japan]
The rice full-length cDNA consortium;
"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.";
Science 301:376-379(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AP003269; BAB89725.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP003412; BAB90248.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK070064; -; NOT_ANNOTATED_CDS; mRNA.[EMBL / GenBank / DDBJ]
RefSeq NP_001045345.1; -.
UniGene Os.34808
3D structure databases
HSSP P04191; 1SU4. [HSSP ENTRY / PDB]
ModBase Q8RUN1.
Organism-specific databases
Gramene Q8RUN1; -.
Ontologies
GO
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0005524; Molecular function: ATP binding (inferred from electronic annotation from InterPro).
GO:0005509; Molecular function: calcium ion binding (inferred from electronic annotation from InterPro).
GO:0005388; Molecular function: calcium-transporting ATPase activity (inferred from electronic annotation from InterPro).
GO:0005516; Molecular function: calmodulin binding (inferred from electronic annotation from UniProtKB-KW).
GO:0000287; Molecular function: magnesium ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0006816; Biological process: calcium ion transport (inferred from electronic annotation from InterPro).
GO:0008152; Biological process: metabolic process (inferred from electronic annotation from InterPro).
GO:0015992; Biological process: proton transport (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR006408; ATPase-IIB_Ca.
IPR001757; ATPase_P.
IPR006068; ATPase_P_cat_C.
IPR004014; ATPase_P_cat_N.
IPR005834; Dehalogen-like_hydro.
IPR008250; E1-E2_ATPase_reg.
IPR000695; H_ATPase.
Graphical view of domain structure.
PANTHER PTHR11939; ATPase_P; 1.
Pfam PF00689; Cation_ATPase_C; 1.
PF00690; Cation_ATPase_N; 1.
PF00122; E1-E2_ATPase; 1.
PF00702; Hydrolase; 1.
Pfam graphical view of domain structure.
PRINTS PR00119; CATATPASE.
PR00120; HATPASE.
TIGRFAMs TIGR01517; ATPase-IIB_Ca; 1.
TIGR01494; ATPase_P-type; 3.
PROSITE PS00154; ATPASE_E1_E2; 1.
ProtoNet Q8RUN1.
Genome annotation databases
GeneID 4326507; -.
KEGG osa:4326507; -.
NMPDR fig|39947.1.peg.7045; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
ATP-binding; Calcium; Calcium transport; Calmodulin-binding; Hydrolase; Ion transport; Magnesium; Membrane; Metal-binding; Nucleotide-binding; Phosphoprotein; Transmembrane; Transport.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom    To Length Description FTId
CHAIN   1   1043  1043     Calcium-transporting ATPase 3, plasma membrane-type. PRO_0000247302
TOPO_DOM   1    178  178     Cytoplasmic (Potential). 
TRANSMEM   179    199  21     Potential. 
TRANSMEM   202    222  21     Potential. 
TOPO_DOM   223    258  36     Cytoplasmic (Potential). 
TRANSMEM   259    279  21     Potential. 
TRANSMEM   356    376  21     Potential. 
TOPO_DOM   377    395  19     Cytoplasmic (Potential). 
TRANSMEM   396    416  21     Potential. 
TRANSMEM   824    844  21     Potential. 
TOPO_DOM   845    845  1     Cytoplasmic (Potential). 
TRANSMEM   846    866  21     Potential. 
TRANSMEM   891    911  21     Potential. 
TOPO_DOM   912    955  44     Cytoplasmic (Potential). 
TRANSMEM   956    976  21     Potential. 
TRANSMEM   998   1018  21     Potential. 
TOPO_DOM   1019   1043  25     Cytoplasmic (Potential). 
ACT_SITE   460    460        4-aspartylphosphate intermediate (By similarity). 
METAL   761    761        Magnesium (By similarity). 
METAL   765    765        Magnesium (By similarity). 
Sequence information
Length: 1043 AA [This is the length of the unprocessed precursor] Molecular weight: 112842 Da [This is the MW of the unprocessed precursor] CRC64: A16B82561803AF56 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MSFIRKKSME FLKSFEVPAK NPSEEAQRRW RDAVGTLVKN RRRRFRMVPD LDKRSQAETQ 

        70         80         90        100        110        120 
RRKIQEKLRV ALFVQKAALQ FIDAVRKTEH PLPELARQCG FSVSAEELAS IVRGHDTKSL 

       130        140        150        160        170        180 
RFHNGVDGIA RKVAVSLADG VKSDDAGLRA EVYGANQYTE KPPRTFWMFL WDASQDMTLL 

       190        200        210        220        230        240 
LLAFCAAVSV AIGLATEGWP SGMYDGVGIM LTILLVVMIT AASDYKQSLQ FRDLDKEKKK 

       250        260        270        280        290        300 
IDVQVTRDGY RQKVSIYDIV VGDIVHLSIG DQVPADGLFI DGYSFVVDES NLSGESEPVH 

       310        320        330        340        350        360 
VSTANRFLLG GTKVQDGSAR MLVTAVGMRT EWGNLMETLS QGGEDETPLQ VKLNGVATII 

       370        380        390        400        410        420 
GKIGLAFAVL TFTVLMARFL LGKAGAPGGL LRWRMVDALA VLNFFAVAVT IIVVAVPEGL 

       430        440        450        460        470        480 
PLAVTLSLAF AMKKLMQERA LVRHLSACET MGSASCICTD KTGTLTTNHM VVEKIWASGA 

       490        500        510        520        530        540 
AQTMSNAKGF DQLTSSMSET FAKVLLEGVF HCSGSEVVRG KDGRHTIMGT PTETAILEFG 

       550        560        570        580        590        600 
LAVEKRARIE HTGAGKLKVE PFNSVKKTMA VVIASPSAGG RPRAFLKGAS EVVLSRCSLV 

       610        620        630        640        650        660 
LDGTGNVEKL TDAKAKRVAS AIDAFACEAL RTLCLAYQDV DGGGGDIPGE GYTLIAVFGI 

       670        680        690        700        710        720 
KDPLRPGVRE AVATCHAAGI NVRMVTGDNI NTAKAIAREC GILTDDGIAI EGPEFRNKDP 

       730        740        750        760        770        780 
DQMREIIPKI QVMARSLPLD KHTLVTNLRG MFNEVVAVTG DGTNDAPALH EADIGLAMGI 

       790        800        810        820        830        840 
AGTEVAKENA DVIIMDDNFS TIINVAKWGR SVYINIQKFV QFQLTVNVVA LMVNFISASF 

       850        860        870        880        890        900 
TGSAPLTIVQ LLWVNLIMDT LGALALATEP PNDAMMKRPP VGRGDNFITK VMWRNIVGQS 

       910        920        930        940        950        960 
IYQLVVLGVL LLRGKSLLQI NGPQADSLLN TFVFNTFVFC QVFNEVNSRE MEKINVFSGI 

       970        980        990       1000       1010       1020 
FSSWIFSAVV GVTAGFQVIM VELLGTFANT VHLSGKLWLT SVLIGSVGLV IGAILKCIPV 

      1030       1040 
ESGSDASDRH DGYRPIPTGP SAV
Q8RUN1 in FASTA format

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