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UniProtKB/Swiss-Prot entry Q8R424


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name STABP_RAT
Primary accession number Q8R424
Secondary accession numbers None
Integrated into Swiss-Prot on July 19, 2005
Sequence was last modified on June 1, 2002 (Sequence version 1)
Annotations were last modified on    November 4, 2008 (Entry version 41)
Name and origin of the protein
Protein name STAM-binding protein
Synonyms EC 3.1.2.15
Associated molecule with the SH3 domain of STAM
Gene name
Name: Stambp
Synonyms: Amsh
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
Pawlak A., Guellaen G.;
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Prostate;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AY083159; AAL92520.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC061711; AAH61711.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_612540.1; -.
UniGene Rn.14662
3D structure databases
ModBase Q8R424.
Protein family/group databases
MEROPS M67.006; -.
PTM databases
PhosphoSite Q8R424; -.
Organism-specific databases
RGD 619963; Stambp.
Gene expression databases
ArrayExpress Q8R424; -.
GermOnline ENSRNOG00000012227; Rattus norvegicus.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from UniProtKB-KW).
GO:0016020; Cellular component: membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0005634; Cellular component: nucleus (inferred from electronic annotation from UniProtKB-KW).
GO:0008237; Molecular function: metallopeptidase activity (inferred from electronic annotation from UniProtKB-KW).
GO:0004221; Molecular function: ubiquitin thiolesterase activity (inferred from electronic annotation from EC).
GO:0008270; Molecular function: zinc ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0006511; Biological process: ubiquitin-dependent protein catabolic process (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR000555; Mov34_MPN_PAD1.
Graphical view of domain structure.
Pfam PF01398; Mov34; 1.
Pfam graphical view of domain structure.
SMART SM00232; JAB_MPN; 1.
SMART graphical view of domain structure.
ProtoNet Q8R424.
Genome annotation databases
Ensembl ENSRNOG00000012227; Rattus norvegicus. [Contig view]
GeneID 171565; -.
KEGG rno:171565; -.
Phylogenomic databases
HOVERGEN Q8R424; -.
Other
NextBio 622575; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cytoplasm; Hydrolase; Membrane; Metal-binding; Metalloprotease; Nucleus; Phosphoprotein; Protease; Ubl conjugation pathway; Zinc.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   424  424     STAM-binding protein. PRO_0000194871
DOMAIN   252   361  110     MPN. 
REGION   227   231  5     Interaction with STAM1 (By similarity). 
COMPBIAS   73   127  55     Lys-rich. 
COMPBIAS   139   172  34     Gln-rich. 
METAL   280   280        Zinc (By similarity). 
METAL   335   335        Zinc (By similarity). 
METAL   337   337        Zinc (By similarity). 
METAL   348   348        Zinc; catalytic (By similarity). 
MOD_RES   2     2        Phosphoserine (By similarity). 
MOD_RES   48    48        Phosphoserine (By similarity). 
MOD_RES   243   243        Phosphoserine (By similarity). 
Sequence information
Length: 424 AA [This is the length of the unprocessed precursor] Molecular weight: 48512 Da [This is the MW of the unprocessed precursor] CRC64: 90BE083ADACF4B44 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSDHADVSLP PQDRVRILSQ LGSAVELNED IPPRRYFRSG VEIIRMASIY SEEGNIEHAF 

        70         80         90        100        110        120 
ILYNKYITLF IEKLPKHRDY KSAIIPEKKD AVKKLKNVAF PKAEELKTEL LKRYTKEYEQ 

       130        140        150        160        170        180 
YKERKKKEEE ELARNIAIQQ ELEKEKQRVA QQKQKQLEQE QFHAFEKMIQ KQELEKERLK 

       190        200        210        220        230        240 
IVQEFGKVDP GPCGPLLPDL EKPCVDVAPS SPFSPTQTSD CNTTLRPAKP PVVDRSLKPG 

       250        260        270        280        290        300 
ALSVIENVPT IEGLRHIVVP RNLCSEFLQL ASANTAKGIE TCGVLCGKLM RNEFTITHVL 

       310        320        330        340        350        360 
IPRQNGGPDY CHTENEEEIF FMQDDLGLLT LGWIHTHPTQ TAFLSSVDLH THCSYQMMLP 

       370        380        390        400        410        420 
ESIAIVCSPK FQETGFFKLT DYGLQEISTC RQKGFHPHGR DPPLFCDCSH VTVKDRIVTI 


TDLR 

Q8R424 in FASTA format

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