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UniProtKB/Swiss-Prot entry Q8QPK2


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name NRAM_I00A0
Primary accession number Q8QPK2
Secondary accession numbers None
Integrated into Swiss-Prot on November 13, 2007
Sequence was last modified on June 1, 2002 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 34)
Name and origin of the protein
Protein name Neuraminidase
Synonym EC 3.2.1.18
Gene name
Name: NA
From
Influenza A virus (strain A/Duck/Hong Kong/2986.1/2000 H5N1 genotype C) [TaxID: 176674] 
Taxonomy Viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A.
Virus hosts Aves [TaxID: 8782]
Felis silvestris catus (Cat) [TaxID: 9685]
Homo sapiens (Human) [TaxID: 9606]
Panthera pardus (Leopard) [TaxID: 9691]
Panthera tigris (Tiger) [TaxID: 9694]
Sus scrofa (Pig) [TaxID: 9823]
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC RNA].
DOI=10.1006/viro.2001.1207; PubMed=11878904 [NCBI, ExPASy, EBI, Israel, Japan]
Guan Y., Peiris M., Kong K.F., Dyrting K.C., Ellis T.M., Sit T., Zhang L.J., Shortridge K.F.;
"H5N1 influenza viruses isolated from geese in Southeastern China: evidence for genetic reassortment and interspecies transmission to ducks.";
Virology 292:16-23(2002).
Comments
  • FUNCTION: Catalyzes the removal of terminal sialic acid residues from viral and cellular glycoconjugates. Cleaves off the terminal sialic acids on the glycosylated HA during virus budding to facilitate virus release. Additionally helps virus spread through the circulation by further removing sialic acids from the cell surface. These cleavages prevent self-aggregation and ensure the efficient spread of the progeny virus from cell to cell. Otherwise, infection would be limited to one round of replication. Described as a receptor-destroying enzyme because it cleaves a terminal sialic acid from the cellular receptors. May facilitate viral invasion of the upper airways by cleaving the sialic acid moities on the mucin of the airway epithelial cells. Likely to plays a role in the budding process through its association with lipid rafts during intracellular transport. May additionally display a raft-association independent effect on budding. Plays a role in the determination of host range restriction on replication and virulence. Sialidase activity in late endosome/lysosome traffic seems to enhance virus replication (By similarity).
  • CATALYTIC ACTIVITY: Hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)- glycosidic linkages of terminal sialic acid residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
  • COFACTOR: Binds 1 calcium ion (By similarity).
  • ENZYME REGULATION: Inhibited by the neuraminidase inhibitors zanamivir (Relenza) and oseltamivir (Tamiflu). These drugs interfere with the release of progeny virus from infected cells and are effective against all influenza strains. Resistance to neuraminidase inhibitors is quite rare.
  • SUBUNIT: Homotetramer (By similarity).
  • SUBCELLULAR LOCATION: Virion membrane (By similarity). Apical cell membrane; Single-pass type II membrane protein (By similarity). Note=Preferentially accumulates at the apical plasma membrane in infected polarized epithelial cells, which is the virus assembly site. Uses lipid rafts for cell surface transport and apical sorting. In the virion, forms a mushroom-shaped spike on the surface of the membrane (By similarity).
  • DOMAIN: Intact N-terminus is essential for virion morphogenesis. Possess two apical sorting signals, one in the ectodomain, which is likely to be a glycan, and the other in the transmembrane domain. The transmembrane domain also plays a role in lipid raft association (By similarity).
  • PTM: N-glycosylated (By similarity).
  • MISCELLANEOUS: The influenza A genome consist of 8 RNA segments. Genetic variation of hemagglutinin and/or neuraminidase genes results in the emergence of new influenza strains. The mechanism of variation can be the result of point mutations or the result of genetic reassortment between segments of two different strains.
  • SIMILARITY: Belongs to the glycosyl hydrolase 34 family [view classification].
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AY059490; AAL31396.1; -; Genomic_RNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
3D structure databases
HSSP P03472; 1F8E. [HSSP ENTRY / PDB]
SMR Q8QPK2; 83-467.
ModBase Q8QPK2.
Ontologies
GO
GO:0016324; Cellular component: apical plasma membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0055036; Cellular component: virion membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0005509; Molecular function: calcium ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0004308; Molecular function: exo-alpha-sialidase activity (inferred from electronic annotation from InterPro).
GO:0005975; Biological process: carbohydrate metabolic process (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR001860; Glyco_hydro_34.
Graphical view of domain structure.
Pfam PF00064; Neur; 1.
Pfam graphical view of domain structure.
ProDom PD000431; Glyco_hydro_34; 1.
[Domain structure / List of seq. sharing at least 1 domain]
ProtoNet Q8QPK2.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Cell membrane; Complete proteome; Glycoprotein; Glycosidase; Hydrolase; Membrane; Metal-binding; Signal-anchor; Transmembrane; Virion.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   469  469     Neuraminidase. PRO_0000310929
TOPO_DOM   1     6  6     Cytoplasmic (Potential). 
TRANSMEM   7    27  21     Potential. 
TOPO_DOM   28   469  442     Extracellular (Potential). 
REGION   11    33  23     Involved in apical transport and lipid raft association (By similarity). 
REGION   36    90  55     Hypervariable stalk region (By similarity). 
REGION   91   469  379     Head of neuraminidase (By similarity). 
ACT_SITE   151   151        Potential. 
ACT_SITE   277   277        Potential. 
ACT_SITE   402   402        Potential. 
METAL   294   294        Calcium; via carbonyl oxygen (By similarity). 
METAL   298   298        Calcium; via carbonyl oxygen (By similarity). 
METAL   324   324        Calcium (By similarity). 
BINDING   118   118        Substrate (Potential). 
BINDING   293   293        Substrate (Potential). 
BINDING   368   368        Substrate (Potential). 
CARBOHYD   50    50        N-linked (GlcNAc...) (Potential). 
CARBOHYD   58    58        N-linked (GlcNAc...) (Potential). 
CARBOHYD   63    63        N-linked (GlcNAc...) (Potential). 
CARBOHYD   68    68        N-linked (GlcNAc...) (Potential). 
CARBOHYD   88    88        N-linked (GlcNAc...) (Potential). 
CARBOHYD   146   146        N-linked (GlcNAc...) (Potential). 
CARBOHYD   235   235        N-linked (GlcNAc...) (Potential). 
CARBOHYD   386   386        N-linked (GlcNAc...) (Potential). 
DISULFID   92   417        By similarity. 
DISULFID   124   129        By similarity. 
DISULFID   184   231        By similarity. 
DISULFID   233   238        By similarity. 
DISULFID   279   292        By similarity. 
DISULFID   281   290        By similarity. 
DISULFID   421   446        By similarity. 
Sequence information
Length: 469 AA [This is the length of the unprocessed precursor] Molecular weight: 51366 Da [This is the MW of the unprocessed precursor] CRC64: DF455ADB29FF49B6 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MNPNQKIITI GSICMVIGIV SLMLQIGNII SIWVSHSIQT GNQHQAEPCN QSIITYENNT 

        70         80         90        100        110        120 
WVNQTYVNIS NTNFLTEKAV ASVTLAGNSS LCPISGWAVY SKDNGIRIGS KGDVFVIREP 

       130        140        150        160        170        180 
FISCSHLECR TFFLTQGALL NDKHSNGTVK DRSPYRTLMS CPVGEAPSPY NSRFESVAWS 

       190        200        210        220        230        240 
ASACHDGTSW LTIGISGPDN GAVAVLKYNG IITDTIKSWR NNILRTQESE CACVNGSCFT 

       250        260        270        280        290        300 
VMTDGPSNGQ ASYKIFKIEK GKVVKSVELN APNYHYEECS CYPDAGEITC VCRDNWHGSN 

       310        320        330        340        350        360 
RPWVSFNQNL EYQIGYICSG VFGDNPRPND GTGSCGPVSP NGAYGIKGFS FKYGNGVWIG 

       370        380        390        400        410        420 
RTKSTNSRSG FEMIWDPNGW TGTDSNFSVK QDIVAITDWS GYSGSFVQHP ELTGLDCIRP 

       430        440        450        460 
CFWVELIRGR PKESTIWTSG SSISFCGVNS DTVGWSWPDG AELPFTIDK 

Q8QPK2 in FASTA format

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View entry in raw text format (no links)
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