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UniProtKB/Swiss-Prot entry Q8N2R0


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name OSR2_HUMAN
Primary accession number Q8N2R0
Secondary accession numbers Q96AM6 Q96LB6 Q96LB7
Integrated into Swiss-Prot on January 24, 2006
Sequence was last modified on May 1, 2007 (Sequence version 2)
Annotations were last modified on    June 16, 2009 (Entry version 53)
Name and origin of the protein
Protein name Protein odd-skipped-related 2
Synonyms None
Gene name
Name: OSR2
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2).
Jiang R., Cho E.-S., Lan Y.;
"Isolation of the human OSR2 gene.";
Submitted (JUN-2001) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
TISSUE=Embryo;
DOI=10.1038/ng1285; PubMed=14702039 [NCBI, ExPASy, EBI, Israel, Japan]
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S., Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.;
"Complete sequencing and characterization of 21,243 full-length human cDNAs.";
Nat. Genet. 36:40-45(2004).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
TISSUE=Kidney;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AY038072; AAK74066.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY038073; AAK74067.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK074518; BAC11035.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC016936; AAH16936.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00170991; -.
IPI00719002; -.
RefSeq NP_001135934.1; -.
NP_443727.2; -.
UniGene Hs.253247
3D structure databases
HSSP P07248; 2ADR. [HSSP ENTRY / PDB]
ModBase Q8N2R0.
Organism-specific databases
GeneCards GC08P100025; -.
HGNC HGNC:15830; OSR2.
GenAtlas OSR2.
MIM 611297; gene. [NCBI / EBI]
PharmGKB PA28816; -.
Gene expression databases
ArrayExpress Q8N2R0; -.
Bgee Q8N2R0; -.
CleanEx HS_OSR2; -.
GermOnline ENSG00000164920; Homo sapiens.
Ontologies
GO
GO:0005634; Cellular component: nucleus (inferred from electronic annotation from UniProtKB-SubCell).
GO:0003676; Molecular function: nucleic acid binding (inferred from electronic annotation from InterPro).
GO:0008270; Molecular function: zinc ion binding (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR007087; Znf_C2H2.
IPR015880; Znf_C2H2-like.
IPR013087; Znf_C2H2/integrase_DNA-bd.
Graphical view of domain structure.
Gene3D G3DSA:3.30.160.60; Znf_C2H2/integrase_DNA-bd; 1.
Pfam PF00096; zf-C2H2; 5.
Pfam graphical view of domain structure.
ProDom PD000003; Znf_C2H2; 4.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00355; ZnF_C2H2; 5.
SMART graphical view of domain structure.
PROSITE PS00028; ZINC_FINGER_C2H2_1; 5.
PS50157; ZINC_FINGER_C2H2_2; 5.
PROSITE graphical view of domain structure (profiles).
Genome annotation databases
Ensembl ENSG00000164920; Homo sapiens. [Contig view]
GeneID 116039; -.
KEGG hsa:116039; -.
Phylogenomic databases
HOGENOM Q8N2R0; -.
HOVERGEN Q8N2R0; -.
OMA Q8N2R0; VNTFPAA.
Other
NextBio 79729; -.
SOURCE OSR2; Homo sapiens.
ProtoNet Q8N2R0.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Alternative splicing; Metal-binding; Nucleus; Zinc; Zinc-finger.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   312  312     Protein odd-skipped-related 2. PRO_0000047007
ZN_FING   172   194  23     C2H2-type 1. 
ZN_FING   200   222  23     C2H2-type 2. 
ZN_FING   228   250  23     C2H2-type 3. 
ZN_FING   256   278  23     C2H2-type 4. 
ZN_FING   284   306  23     C2H2-type 5; degenerate. 
VAR_SEQ   253   312        ESPHKCPTCGRTFNQRSNLKTHLLTHTDIKPYSCEQCGKV FRRNCDLRRHSLTHTPRQDF -> TSSPTAASSAAKCSGETVICGGTA (in isoform 2). VSP_017121
CONFLICT   132   132        K -> G (in Ref. 1; AAK74066). 
CONFLICT   286   286        C -> R (in Ref. 2; BAC11035). 
Sequence information
Length: 312 AA [This is the length of the unprocessed precursor] Molecular weight: 35513 Da [This is the MW of the unprocessed precursor] CRC64: 312E5A688EFB88B6 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MGSKALPAPI PLHPSLQLTN YSFLQAVNTF PATVDHLQGL YGLSAVQTMH MNHWTLGYPN 

        70         80         90        100        110        120 
VHEITRSTIT EMAAAQGLVD ARFPFPALPF TTHLFHPKQG AIAHVLPALH KDRPRFDFAN 

       130        140        150        160        170        180 
LAVAATQEDP PKMGDLSKLS PGLGSPISGL SKLTPDRKPS RGRLPSKTKK EFICKFCGRH 

       190        200        210        220        230        240 
FTKSYNLLIH ERTHTDERPY TCDICHKAFR RQDHLRDHRY IHSKEKPFKC QECGKGFCQS 

       250        260        270        280        290        300 
RTLAVHKTLH MQESPHKCPT CGRTFNQRSN LKTHLLTHTD IKPYSCEQCG KVFRRNCDLR 

       310 
RHSLTHTPRQ DF 

Q8N2R0 in FASTA format

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