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UniProtKB/Swiss-Prot entry Q8L6J5

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name RPO1B_TOBAC
Primary accession number Q8L6J5
Secondary accession number Q8L6K2
Integrated into Swiss-Prot on February 7, 2006
Sequence was last modified on February 7, 2006 (Sequence version 2)
Annotations were last modified on    November 25, 2008 (Entry version 28)
Name and origin of the protein
Protein name DNA-directed RNA polymerase 1B, mitochondrial [Precursor]
Synonyms EC 2.7.7.6
T7 bacteriophage-type single subunit RNA polymerase 1B
NictaRpoT1-tom
Gene name
Name: RPOT1-TOM
From
Nicotiana tabacum (Common tobacco) [TaxID: 4097] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana.
Protein existence 2: Evidence at transcript level;
References
[1]
 NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], AND SUBCELLULAR LOCATION.
PubMed=12061895 [NCBI, ExPASy, EBI, Israel, Japan]
Hedtke B., Legen J., Weihe A., Herrmann R.G., Boerner T.;
"Six active phage-type RNA polymerase genes in Nicotiana tabacum.";
Plant J. 30:625-637(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AJ302018; CAC82574.2; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ416571; CAC95022.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
3D structure databases
HSSP P00573; 1ARO. [HSSP ENTRY / PDB]
ModBase Q8L6J5.
Ontologies
GO
GO:0005739; Cellular component: mitochondrion (inferred from electronic annotation from UniProtKB-KW).
GO:0003677; Molecular function: DNA binding (inferred from electronic annotation from InterPro).
GO:0003899; Molecular function: DNA-directed RNA polymerase activity (inferred from electronic annotation from InterPro).
GO:0006350; Biological process: transcription (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR002092; DNA-dir_RNA_pol_phage.
Graphical view of domain structure.
PANTHER PTHR10102; RNA_pol_phage; 1.
Pfam PF00940; RNA_pol; 1.
Pfam graphical view of domain structure.
PROSITE PS00900; RNA_POL_PHAGE_1; 1.
PS00489; RNA_POL_PHAGE_2; 1.
ProtoNet Q8L6J5.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
DNA-directed RNA polymerase; Mitochondrion; Nucleotidyltransferase; Transcription; Transferase; Transit peptide.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
TRANSIT   1     21  21     Mitochondrion (Potential). 
CHAIN   22   1002  981     DNA-directed RNA polymerase 1B, mitochondrial. PRO_0000046033
ACT_SITE   703    703        By similarity. 
ACT_SITE   778    778        By similarity. 
ACT_SITE   935    935        By similarity. 
CONFLICT   502    502        D -> N (in Ref. 1; CAC82574). 
Sequence information
Length: 1002 AA [This is the length of the unprocessed precursor] Molecular weight: 113532 Da [This is the MW of the unprocessed precursor] CRC64: 06451D1652707D72 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MWRYISKHAY SRKFRNSHDS ALLGFSQYSS SFGKTRPLQC LCEESTTHPN LGLSQNSIFS 

        70         80         90        100        110        120 
RISRKVRHLE GICEESSKNP HLGLSQNSTF SSVKGDFRIC GKRGSGSLGR LRSYGSAAEA 

       130        140        150        160        170        180 
IVSTSEEDID EIQELIEEMD KENEALKANL QPKQPKTIGG MGVGKYNFLR RRQIKVETEA 

       190        200        210        220        230        240 
WEEAAKEYQE LLMDMCEQKL APNLPYMKSL FLGWFEPLRD AIAAEQKLCD EGKNRGAYAP 

       250        260        270        280        290        300 
FFDQLPAEMM AVITMHKLMG LLMTGGGTGS ARVVQAASYI GEAIEHEARI HRFLEKTKKS 

       310        320        330        340        350        360 
NALSGDLEET PGDMMKERER LRKKVKILMK KQKLRQVRKI VKQQDDEKPW GQDNLVKVGC 

       370        380        390        400        410        420 
RLIQILMETA YIQPPNDQLD DGPPDIRPAF VHTLKTVETM KGSRRYGVIQ CDPLVRKGLD 

       430        440        450        460        470        480 
KTARHMVIPY MPMLVPPQSW LGYDKGGYLF LPSYIMRTHG AKQQREAVKR VPKKQLEPVF 

       490        500        510        520        530        540 
QALDTLGNTK WRVNRKVLGI VDRIWASGGR LADLVDREDV PLPEAPDTED EAEIRKWKWK 

       550        560        570        580        590        600 
VKGVKKENCE RHSQRCDIEL KLAVARKMKD EDGFYYPHNL DFRGRAYPMH PYLNHLGSDL 

       610        620        630        640        650        660 
CRGILEFAEG RPLGTSGLRW LKIHLANVYG GGVDKLSYEG RVAFSENHLE DIFDSAERPL 

       670        680        690        700        710        720 
EGKRWWLGAE DPFQCLATCI NIAEALRSPS PETAISYMPI HQDGSCNGLQ HYAALGRDKL 

       730        740        750        760        770        780 
GAAAVNLVAG DKPADVYSGI AARVLDIMKR DAAKDPANDP NVMRARLLIN QVDRKLVKQT 

       790        800        810        820        830        840 
VMTSVYGVTY IGARDQIKKR LKERGVIEDD NELFAAACYA AKTTLTALGE MFEAARSIMS 

       850        860        870        880        890        900 
WLGDCAKIIA MENHPVRWTT PLGLPVVQPY RKLGRHLIKT SLQILTLQRE TDKVMVKRQR 

       910        920        930        940        950        960 
TAFPPNFVHS LDGSHMMMTA IACKESGLSF AGVHDSYWTH ACDVDQMNKI LREKFVELYD 

       970        980        990       1000 
APILENLLES FQQSFPDLQF PPLPERGDFD LREVLESPYF FN
Q8L6J5 in FASTA format

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