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UniProtKB/Swiss-Prot entry Q8KC05


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name GCSPA_CHLTE
Primary accession number Q8KC05
Secondary accession numbers None
Integrated into Swiss-Prot on October 3, 2003
Sequence was last modified on October 1, 2002 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 33)
Name and origin of the protein
Protein name Probable glycine dehydrogenase [decarboxylating] subunit 1
Synonyms EC 1.4.4.2
Glycine decarboxylase subunit 1
Glycine cleavage system P-protein subunit 1
Gene name
Name: gcvPA
Synonyms: gcvP1
OrderedLocusNames: CT1625
From
Chlorobium tepidum [TaxID: 1097] [HAMAP proteome]
Taxonomy Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 49652 / DSM 12025 / TLS;
DOI=10.1073/pnas.132181499; PubMed=12093901 [NCBI, ExPASy, EBI, Israel, Japan]
Eisen J.A., Nelson K.E., Paulsen I.T., Heidelberg J.F., Wu M., Dodson R.J., DeBoy R.T., Gwinn M.L., Nelson W.C., Haft D.H., Hickey E.K., Peterson J.D., Durkin A.S., Kolonay J.F., Yang F., Holt I.E., Umayam L.A., Mason T.M., Brenner M., Shea T.P., Parksey D.S., Nierman W.C., Feldblyum T.V., Hansen C.L., Craven M.B., Radune D., Vamathevan J.J., Khouri H.M., White O., Gruber T.M., Ketchum K.A., Venter J.C., Tettelin H., Bryant D.A., Fraser C.M.;
"The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium.";
Proc. Natl. Acad. Sci. U.S.A. 99:9509-9514(2002).
Comments
  • FUNCTION: The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (By similarity).
  • CATALYTIC ACTIVITY: Glycine + H-protein-lipoyllysine = H-protein-S-aminomethyldihydrolipoyllysine + CO2.
  • SUBUNIT: The glycine cleavage system is composed of four proteins: P, T, L and H. In this organism, the P 'protein' is an heterodimer of two subunits (By similarity).
  • SIMILARITY: Belongs to the gcvP family. N-terminal subunit subfamily.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE006470; AAM72850.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_662508.1; -.
3D structure databases
ModBase Q8KC05.
Enzyme and pathway databases
BioCyc CTEP194439:CT_1625-MON; -.
Ontologies
GO
GO:0004375; Molecular function: glycine dehydrogenase (decarboxylating) activity (inferred from electronic annotation from InterPro).
GO:0030170; Molecular function: pyridoxal phosphate binding (inferred from electronic annotation from InterPro).
GO:0019464; Biological process: glycine decarboxylation via glycine cleavage system (inferred from electronic annotation from HAMAP).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
HAMAP MF_00712; -; 1.
PBIL [Tree]
InterPro IPR003437; GDC-P.
IPR015421; PyrdxlP-dep_Trfase_major_sub1.
Graphical view of domain structure.
Gene3D G3DSA:3.40.640.10; PyrdxlP-dep_Trfase_major_sub1; 1.
PANTHER PTHR11773; GDC-P; 1.
Pfam PF02347; GDC-P; 1.
Pfam graphical view of domain structure.
ProtoNet Q8KC05.
Genome annotation databases
GeneID 1006116; -.
GenomeReviews AE006470_GR; CT1625.
KEGG cte:CT1625; -.
NMPDR fig|194439.1.peg.1602; -.
TIGR CT1625; -.
Phylogenomic databases
HOGENOM Q8KC05; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   444  444     Probable glycine dehydrogenase [decarboxylating] subunit 1. PRO_0000166963
Sequence information
Length: 444 AA [This is the length of the unprocessed precursor] Molecular weight: 47739 Da [This is the MW of the unprocessed precursor] CRC64: 334273FF9723BB7F [This is a checksum on the sequence]
        10         20         30         40         50         60 
MPFIVNTDAE RAEMLREIGV ENFEALIADI PEEIRLKKAL DLFPAMGEPE VKSLLEKMAS 

        70         80         90        100        110        120 
GNAATCDHVS FLGAGAYDHF IPSAVKTIAS RSEFYTAYTP YQAEVSQGTL QAIYEYQSVM 

       130        140        150        160        170        180 
CRLYGMDVAN ASMYDGASAL AEAALIALNV TGRNGIVVAG KLHPYTSQVL ETYLEAAGDR 

       190        200        210        220        230        240 
SIVQNGLENG IGSVEALEAL VSSETAAVIV QQPNFYGCLE EVEAIGEIAR KNGALFIVSA 

       250        260        270        280        290        300 
DPVSLGVLEA PGNYGADIAV GEGQSVGNAQ SFGGPYLGIL TVKQAHVRKI PGRLVGMTKD 

       310        320        330        340        350        360 
KDGNDGFILT LQTREQHIRR EKATSNICSN QALCALQSVV HLSLLGKEGI RDVANRSMQK 

       370        380        390        400        410        420 
AHYLADRIAE LPGYSMKFSA PFFREFVVET PVPSATIIEK MLEKKVFAGV DLSAWGEDGL 

       430        440 
LVAVTEKRTK EELDSFVSEL AALG 

Q8KC05 in FASTA format

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