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UniProtKB/Swiss-Prot entry Q8IZ73


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name RUSD2_HUMAN
Primary accession number Q8IZ73
Secondary accession numbers Q7L989 Q92939 Q96IA7 Q96N50
Integrated into Swiss-Prot on September 11, 2007
Sequence was last modified on April 3, 2007 (Sequence version 2)
Annotations were last modified on    May 5, 2009 (Entry version 44)
Name and origin of the protein
Protein name RNA pseudouridylate synthase domain-containing protein 2
Synonyms None
Gene name
Name: RPUSD2
Synonyms: C15orf19
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
DOI=10.1038/ng1285; PubMed=14702039 [NCBI, ExPASy, EBI, Israel, Japan]
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S., Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.;
"Complete sequencing and characterization of 21,243 full-length human cDNAs.";
Nat. Genet. 36:40-45(2004).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Lymph;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 334-545.
TISSUE=Lung;
Sampson M., McClendon D., Wiley K., Barlow C.;
Submitted (AUG-1996) to the EMBL/GenBank/DDBJ databases.
[4]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-68, AND MASS SPECTROMETRY.
TISSUE=Epithelium;
DOI=10.1021/pr070152u; PubMed=17924679 [NCBI, ExPASy, EBI, Israel, Japan]
Yu L.-R., Zhu Z., Chan K.C., Issaq H.J., Dimitrov D.S., Veenstra T.D.;
"Improved titanium dioxide enrichment of phosphopeptides from HeLa cells and high confident phosphopeptide identification by cross-validation of MS/MS and MS/MS/MS spectra.";
J. Proteome Res. 6:4150-4162(2007).
[5]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-68, AND MASS SPECTROMETRY.
DOI=10.1073/pnas.0805139105; PubMed=18669648 [NCBI, ExPASy, EBI, Israel, Japan]
Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P.;
"A quantitative atlas of mitotic phosphorylation.";
Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008).
[6]
IDENTIFICATION [LARGE SCALE ANALYSIS], AND MASS SPECTROMETRY.
Colinge J., Superti-Furga G., Bennett K.L.;
Submitted (OCT-2008) to UniProtKB.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AK055971; BAB71059.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC007697; AAH07697.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC016967; AAH16967.2; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U67934; AAB07777.1; ALT_FRAME; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00150963; -.
RefSeq NP_689473.1; -.
UniGene Hs.173311
3D structure databases
ModBase Q8IZ73.
Protein-protein interaction databases
IntAct Q8IZ73; 1.
PTM databases
PhosphoSite Q8IZ73; -.
Organism-specific databases
GeneCards GC15P038649; -.
HGNC HGNC:24180; RPUSD2.
GenAtlas RPUSD2.
PharmGKB PA134866412; -.
Gene expression databases
ArrayExpress Q8IZ73; -.
Bgee Q8IZ73; -.
CleanEx HS_RPUSD2; -.
Ontologies
GO
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
GO:0009982; Molecular function: pseudouridine synthase activity (inferred from electronic annotation from InterPro).
GO:0003723; Molecular function: RNA binding (inferred from electronic annotation from InterPro).
GO:0001522; Biological process: pseudouridine synthesis (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR006145; Pseudouridine_synth.
IPR006224; Pseudouridine_synth_CS.
IPR006225; Pseudouridine_synth_RluD.
Graphical view of domain structure.
Pfam PF00849; PseudoU_synth_2; 1.
Pfam graphical view of domain structure.
ProDom PD001819; PseudoU_synth; 1.
[Domain structure / List of seq. sharing at least 1 domain]
TIGRFAMs TIGR00005; rluA_subfam; 1.
PROSITE PS01129; PSI_RLU; 1.
Proteomic databases
PeptideAtlas Q8IZ73; -.
PRIDE Q8IZ73; -.
Genome annotation databases
Ensembl ENSG00000166133; Homo sapiens. [Contig view]
GeneID 27079; -.
KEGG hsa:27079; -.
Phylogenomic databases
HOVERGEN Q8IZ73; -.
OMA Q8IZ73; HALRYKG.
Other
NextBio 49685; -.
ProtoNet Q8IZ73.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Phosphoprotein.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   545  545     RNA pseudouridylate synthase domain-containing protein 2. PRO_0000300819
COMPBIAS   458   461  4     Poly-Ala. 
ACT_SITE   274   274        By similarity. 
MOD_RES   68    68        Phosphoserine. 
CONFLICT   336   336        R -> L (in Ref. 3; AAB07777). 
CONFLICT   492   492        N -> H (in Ref. 3; AAB07777). 
CONFLICT   499   499        C -> S (in Ref. 3; AAB07777). 
Sequence information
Length: 545 AA [This is the length of the unprocessed precursor] Molecular weight: 61311 Da [This is the MW of the unprocessed precursor] CRC64: 16E8B71918A6E0B7 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MWLDRRGWLR VLGHWRYDLR RPSFTRTWSG DKGPMAETVS TQVGTEGGLR ASHQQNGDAG 

        70         80         90        100        110        120 
GDAKVELSPG PPKPAGREVE PAPVGGEHPS AAAPGPGKHK KRRGATRERV VPPPKKRRTG 

       130        140        150        160        170        180 
VSFGDEHFAE TSYYFEGGLR KVRPYYFDFR TYCKGRWVGH SLLHVFSTEF RAQPLAYYEA 

       190        200        210        220        230        240 
AVRAGRLQLN EKPVQDLNIV LKDNDFLRNT VHRHEPPVTA EPIRLLAENE DVVVVDKPSS 

       250        260        270        280        290        300 
IPVHPCGRFR HNTVIFILGK EHQLKELHPL HRLDRLTSGV LMFAKTAAVS ERIHEQVRDR 

       310        320        330        340        350        360 
QLEKEYVCRV EGEFPTEEVT CKEPILVVSY KVGVCRVDPR GKPCETVFQR LSYNGQSSVV 

       370        380        390        400        410        420 
RCRPLTGRTH QIRVHLQFLG HPILNDPIYN SVAWGPSRGR GGYIPKTNEE LLRDLVAEHQ 

       430        440        450        460        470        480 
AKQSLDVLDL CEGDLSPGLT DSTAPSSELG KDDLEELAAA AQKMEEVAEA APQELDTIAL 

       490        500        510        520        530        540 
ASEKAVETDV MNQETDPLCA ECRLVRQDPL PQDLVMFLHA LRYKGPGFEY FSPMPAWAQD 


DWQKD 

Q8IZ73 in FASTA format

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