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UniProtKB/Swiss-Prot entry Q8IXJ6


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name SIRT2_HUMAN
Primary accession number Q8IXJ6
Secondary accession numbers O95889 Q924Y7 Q9P0G8 Q9UNT0 Q9Y6E9
Integrated into Swiss-Prot on October 31, 2003
Sequence was last modified on October 31, 2003 (Sequence version 2)
Annotations were last modified on    June 16, 2009 (Entry version 78)
Name and origin of the protein
Protein name NAD-dependent deacetylase sirtuin-2
Synonyms EC 3.5.1.-
SIR2-like protein 2
SIR2-like
Gene name
Name: SIRT2
Synonyms: SIR2L, SIR2L2
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), TISSUE SPECIFICITY, AND MUTAGENESIS OF HIS-187.
TISSUE=Testis;
DOI=10.1006/bbrc.1999.0897; PubMed=10381378 [NCBI, ExPASy, EBI, Israel, Japan]
Frye R.A.;
"Characterization of five human cDNAs with homology to the yeast SIR2 gene: Sir2-like proteins (sirtuins) metabolize NAD and may have protein ADP-ribosyltransferase activity.";
Biochem. Biophys. Res. Commun. 260:273-279(1999).
[2]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), SUBCELLULAR LOCATION, AND TISSUE SPECIFICITY.
DOI=10.1016/S0378-1119(99)00162-6; PubMed=10393250 [NCBI, ExPASy, EBI, Israel, Japan]
Afshar G., Murnane J.P.;
"Characterization of a human gene with sequence homology to Saccharomyces cerevisiae SIR2.";
Gene 234:161-168(1999).
[3]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2).
DOI=10.1046/j.1471-4159.2002.00847.x; PubMed=12065666 [NCBI, ExPASy, EBI, Israel, Japan]
De Smet C., Nishimori H., Furnari F.B., Boegler O., Huang H.-J.S., Cavenee W.K.;
"A novel seven transmembrane receptor induced during the early steps of astrocyte differentiation identified by differential expression.";
J. Neurochem. 81:575-588(2002).
[4]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 3).
Lennerz V., Fatho M., Gentilini C., Lifke A., Woelfel C., Woelfel T.;
"Response of autologous T cells to a human melanoma is dominated by individual mutant antigens.";
Submitted (AUG-2002) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
TISSUE=Adrenal gland;
DOI=10.1073/pnas.160270997; PubMed=10931946 [NCBI, ExPASy, EBI, Israel, Japan]
Hu R.-M., Han Z.-G., Song H.-D., Peng Y.-D., Huang Q.-H., Ren S.-X., Gu Y.-J., Huang C.-H., Li Y.-B., Jiang C.-L., Fu G., Zhang Q.-H., Gu B.-W., Dai M., Mao Y.-F., Gao G.-F., Rong R., Ye M., Zhou J., Xu S.-H., Gu J., Shi J.-X., Jin W.-R., Zhang C.-K., Wu T.-M., Huang G.-Y., Chen Z., Chen M.-D., Chen J.-L.;
"Gene expression profiling in the human hypothalamus-pituitary-adrenal axis and full-length cDNA cloning.";
Proc. Natl. Acad. Sci. U.S.A. 97:9543-9548(2000).
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
TISSUE=Lung;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[7]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 22-389 (ISOFORM 4).
TISSUE=Brain;
Mei G., Yu W., Gibbs R.A.;
Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases.
[8]
INHIBITION BY SIRTINOL; A3 AND M15.
DOI=10.1074/jbc.M106779200; PubMed=11483616 [NCBI, ExPASy, EBI, Israel, Japan]
Grozinger C.M., Chao E.D., Blackwell H.E., Moazed D., Schreiber S.L.;
"Identification of a class of small molecule inhibitors of the sirtuin family of NAD-dependent deacetylases by phenotypic screening.";
J. Biol. Chem. 276:38837-38843(2001).
[9]
CATALYTIC ACTIVITY, AND MUTAGENESIS OF HIS-187.
DOI=10.1074/jbc.M111830200; PubMed=11812793 [NCBI, ExPASy, EBI, Israel, Japan]
Borra M.T., O'Neill F.J., Jackson M.D., Marshall B.L., Verdin E., Foltz K.R., Denu J.M.;
"Conserved enzymatic production and biological effect of O-acetyl-ADP-ribose by silent information regulator 2-like NAD+-dependent deacetylases.";
J. Biol. Chem. 277:12632-12641(2002).
[10]
FUNCTION, SUBCELLULAR LOCATION, INTERACTION WITH HDAC6, AND MUTAGENESIS OF ASN-168 AND HIS-187.
DOI=10.1016/S1097-2765(03)00038-8; PubMed=12620231 [NCBI, ExPASy, EBI, Israel, Japan]
North B.J., Marshall B.L., Borra M.T., Denu J.M., Verdin E.;
"The human Sir2 ortholog, SIRT2, is an NAD+-dependent tubulin deacetylase.";
Mol. Cell 11:437-444(2003).
[11]
FUNCTION, DEVELOPMENTAL STAGE, PHOSPHORYLATION, AND MUTAGENESIS OF HIS-187.
DOI=10.1128/MCB.23.9.3173-3185.2003; PubMed=12697818 [NCBI, ExPASy, EBI, Israel, Japan]
Dryden S.C., Nahhas F.A., Nowak J.E., Goustin A.-S., Tainsky M.A.;
"Role for human SIRT2 NAD-dependent deacetylase activity in control of mitotic exit in the cell cycle.";
Mol. Cell. Biol. 23:3173-3185(2003).
[12]
TISSUE SPECIFICITY.
DOI=10.1016/j.bbrc.2003.08.029; PubMed=12963026 [NCBI, ExPASy, EBI, Israel, Japan]
Hiratsuka M., Inoue T., Toda T., Kimura N., Shirayoshi Y., Kamitani H., Watanabe T., Ohama E., Tahimic C.G.T., Kurimasa A., Oshimura M.;
"Proteomics-based identification of differentially expressed genes in human gliomas: down-regulation of SIRT2 gene.";
Biochem. Biophys. Res. Commun. 309:558-566(2003).
[13]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-25 AND SER-27, AND MASS SPECTROMETRY.
TISSUE=Platelet;
DOI=10.1021/pr0704130; PubMed=18088087 [NCBI, ExPASy, EBI, Israel, Japan]
Zahedi R.P., Lewandrowski U., Wiesner J., Wortelkamp S., Moebius J., Schuetz C., Walter U., Gambaryan S., Sickmann A.;
"Phosphoproteome of resting human platelets.";
J. Proteome Res. 7:526-534(2008).
[14]
X-RAY CRYSTALLOGRAPHY (1.7 ANGSTROMS) OF 34-356 IN COMPLEX WITH ZINC, AND MUTAGENESIS OF ARG-97; GLN-167; ASN-168; ASP-170 AND HIS-187.
DOI=10.1038/89668; PubMed=11427894 [NCBI, ExPASy, EBI, Israel, Japan]
Finnin M.S., Donigian J.R., Pavletich N.P.;
"Structure of the histone deacetylase SIRT2.";
Nat. Struct. Biol. 8:621-625(2001).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF083107; AAD40850.2; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF095714; AAD45971.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY030277; AAK51133.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ505014; CAD43717.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF160214; AAF67015.1; ALT_FRAME; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC003012; AAH03012.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC003547; AAH03547.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF131800; AAD20046.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00179109; -.
IPI00382551; -.
IPI00382553; -.
IPI00472047; -.
RefSeq NP_036369.2; -.
NP_085096.1; -.
UniGene Hs.466693
3D structure databases
PDB
1J8F; X-ray; 1.70 A; A/B/C=34-356.[ExPASy / RCSB / EBI]
PDBsum 1J8F; -.
ModBase Q8IXJ6.
Protein-protein interaction databases
IntAct Q8IXJ6; 13.
PTM databases
PhosphoSite Q8IXJ6; -.
Enzyme and pathway databases
Pathway_Interaction_DB hdac_classi_pathway; Signaling events mediated by HDAC Class I.
hdac_classiii_pathway; Signaling events mediated by HDAC Class III.
Organism-specific databases
GeneCards GC19M044061; -.
H-InvDB HIX0015103; -.
HGNC HGNC:10886; SIRT2.
GenAtlas SIRT2.
HPA CAB004573; -.
HPA011165; -.
MIM 604480; gene. [NCBI / EBI]
PharmGKB PA35786; -.
Gene expression databases
ArrayExpress Q8IXJ6; -.
Bgee Q8IXJ6; -.
CleanEx HS_SIRT2; -.
GermOnline ENSG00000068903; Homo sapiens.
Ontologies
GO
GO:0005677; Cellular component: chromatin silencing complex (non-traceable author statement from UniProtKB).
GO:0005737; Cellular component: cytoplasm (inferred from direct assay from UniProtKB).
GO:0005874; Cellular component: microtubule (inferred from direct assay from UniProtKB).
GO:0035035; Molecular function: histone acetyltransferase binding (inferred from physical interaction from UniProtKB).
GO:0042826; Molecular function: histone deacetylase binding (inferred from physical interaction from UniProtKB).
GO:0070403; Molecular function: NAD binding (inferred from electronic annotation from InterPro).
GO:0017136; Molecular function: NAD-dependent histone deacetylase activity (inferred from direct assay from UniProtKB).
GO:0008134; Molecular function: transcription factor binding (inferred from physical interaction from UniProtKB).
GO:0042903; Molecular function: tubulin deacetylase activity (inferred from direct assay from UniProtKB).
GO:0043130; Molecular function: ubiquitin binding (inferred from direct assay from UniProtKB).
GO:0008270; Molecular function: zinc ion binding (inferred from direct assay from UniProtKB).
GO:0051301; Biological process: cell division (inferred from electronic annotation from UniProtKB-KW).
GO:0000183; Biological process: chromatin silencing at rDNA (non-traceable author statement from UniProtKB).
GO:0006348; Biological process: chromatin silencing at telomere (non-traceable author statement from UniProtKB).
GO:0016575; Biological process: histone deacetylation (traceable author statement from UniProtKB).
GO:0007067; Biological process: mitosis (inferred from electronic annotation from UniProtKB-KW).
GO:0045843; Biological process: negative regulation of striated muscle development (inferred from direct assay from UniProtKB).
GO:0006471; Biological process: protein amino acid ADP-ribosylation (non-traceable author statement from UniProtKB).
GO:0006980; Biological process: redox signal response (non-traceable author statement from UniProtKB).
GO:0007096; Biological process: regulation of exit from mitosis (non-traceable author statement from UniProtKB).
GO:0042325; Biological process: regulation of phosphorylation (non-traceable author statement from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR017328; NAD-dep_deAcase_SIR2_euk.
IPR003000; NAD-dep_histone_deAcase_SIR2.
Graphical view of domain structure.
PANTHER PTHR11085; SIR2; 1.
Pfam PF02146; SIR2; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF037938; SIR2_euk; 1.
PROSITE PS50305; SIRTUIN; 1.
PROSITE graphical view of domain structure (profiles).
Proteomic databases
PRIDE Q8IXJ6; -.
Genome annotation databases
Ensembl ENSG00000068903; Homo sapiens. [Contig view]
GeneID 22933; -.
KEGG hsa:22933; -.
Phylogenomic databases
HOGENOM Q8IXJ6; -.
HOVERGEN Q8IXJ6; -.
Other
NextBio 43669; -.
SOURCE SIRT2; Homo sapiens.
ProtoNet Q8IXJ6.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Alternative splicing; Cell cycle; Cell division; Cytoplasm; Cytoskeleton; Hydrolase; Metal-binding; Microtubule; Mitosis; NAD; Phosphoprotein; Zinc.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   389  389     NAD-dependent deacetylase sirtuin-2. PRO_0000110258
DOMAIN   65   340  276     Deacetylase sirtuin-type. 
NP_BIND   84   104  21     NAD (By similarity). 
NP_BIND   167   171  5     NAD (By similarity). 
ACT_SITE   187   187        Proton acceptor. 
METAL   195   195        Zinc. 
METAL   200   200        Zinc. 
METAL   221   221        Zinc. 
METAL   224   224        Zinc. 
MOD_RES   25    25        Phosphoserine. 
MOD_RES   27    27        Phosphoserine. 
VAR_SEQ   1    38        MAEPDPSHPLETQAGKVQEAQDSDSDSEGGAAGGEADM -> MPLAECPSCRCLSSFRSV (in isoform 3). VSP_008726
VAR_SEQ   1    37        Missing (in isoform 2). VSP_008724
VAR_SEQ   266   271        VQPFAS -> GRGLAG (in isoform 4). VSP_008727
VAR_SEQ   272   389        Missing (in isoform 4). VSP_008728
MUTAGEN   97    97        R->A: No effect on deacetylase activity. 
MUTAGEN   167   167        Q->A: Reduced deacetylase activity. 
MUTAGEN   168   168        N->A: Abolishes acetylation of alpha-tubulin. 
MUTAGEN   170   170        D->A,N: Reduced deacetylase activity. 
MUTAGEN   187   187        H->Y,A: Loss of function. Abolishes acetylation of alpha-tubulin. No effect on phosphorylation. 
CONFLICT   199   199        S -> N (in Ref. 5). 
CONFLICT   219   219        P -> L (in Ref. 4; CAD43717). 
HELIX   35    44  10      
STRAND   60    63  4      
HELIX   64    72  9      
STRAND   79    83  5      
HELIX   85    87  3      
HELIX   89    91  3      
TURN   105   109  5      
HELIX   115   119  5      
HELIX   121   126  6      
HELIX   129   138  10      
STRAND   139   142  4      
HELIX   147   157  11      
STRAND   161   166  6      
HELIX   172   175  4      
HELIX   180   182  3      
STRAND   183   185  3      
STRAND   188   196  9      
TURN   198   200  3      
HELIX   206   214  9      
TURN   222   224  3      
STRAND   227   232  6      
HELIX   241   249  9      
HELIX   250   252  3      
STRAND   255   262  8      
HELIX   267   273  7      
STRAND   282   288  7      
HELIX   295   304  10      
STRAND   309   311  3      
STRAND   316   322  7      
HELIX   324   334  11      
HELIX   338   354  17      
Sequence information
Length: 389 AA [This is the length of the unprocessed precursor] Molecular weight: 43182 Da [This is the MW of the unprocessed precursor] CRC64: A392442A8F6316F1 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAEPDPSHPL ETQAGKVQEA QDSDSDSEGG AAGGEADMDF LRNLFSQTLS LGSQKERLLD 

        70         80         90        100        110        120 
ELTLEGVARY MQSERCRRVI CLVGAGISTS AGIPDFRSPS TGLYDNLEKY HLPYPEAIFE 

       130        140        150        160        170        180 
ISYFKKHPEP FFALAKELYP GQFKPTICHY FMRLLKDKGL LLRCYTQNID TLERIAGLEQ 

       190        200        210        220        230        240 
EDLVEAHGTF YTSHCVSASC RHEYPLSWMK EKIFSEVTPK CEDCQSLVKP DIVFFGESLP 

       250        260        270        280        290        300 
ARFFSCMQSD FLKVDLLLVM GTSLQVQPFA SLISKAPLST PRLLINKEKA GQSDPFLGMI 

       310        320        330        340        350        360 
MGLGGGMDFD SKKAYRDVAW LGECDQGCLA LAELLGWKKE LEDLVRREHA SIDAQSGAGV 

       370        380 
PNPSTSASPK KSPPPAKDEA RTTEREKPQ 

Q8IXJ6 in FASTA format

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