ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry Q89XJ6

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name NOSZ_BRAJA
Primary accession number Q89XJ6
Secondary accession number O31382
Integrated into Swiss-Prot on October 3, 2003
Sequence was last modified on June 1, 2003 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 45)
Name and origin of the protein
Protein name Nitrous-oxide reductase [Precursor]
Synonyms EC 1.7.99.6
N(2)OR
N2O reductase
Gene name
Name: nosZ
OrderedLocusNames: blr0315
From
Bradyrhizobium japonicum [TaxID: 375] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=USDA 110;
Bedmar E.J., Velasco L., Xu C.A., Delgado M.J.;
"Bradyrhizobium japonicum nosRZDFYLX gene cluster.";
Submitted (MAR-1998) to the EMBL/GenBank/DDBJ databases.
[2]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=USDA 110;
DOI=10.1093/dnares/9.6.189; PubMed=12597275 [NCBI, ExPASy, EBI, Israel, Japan]
Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S.;
"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110.";
DNA Res. 9:189-197(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AJ002531; CAA05518.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BA000040; BAC45580.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR T44660; T44660.
RefSeq NP_766955.1; -.
3D structure databases
HSSP Q51705; 1FWX. [HSSP ENTRY / PDB]
ModBase Q89XJ6.
Enzyme and pathway databases
BioCyc BJAP224911:BLR0315-MON; -.
Ontologies
GO
GO:0016020; Cellular component: membrane (inferred from electronic annotation from InterPro).
GO:0042597; Cellular component: periplasmic space (inferred from electronic annotation from HAMAP).
GO:0005509; Molecular function: calcium ion binding (inferred from electronic annotation from HAMAP).
GO:0005507; Molecular function: copper ion binding (inferred from electronic annotation from HAMAP).
GO:0004129; Molecular function: cytochrome-c oxidase activity (inferred from electronic annotation from InterPro).
GO:0050304; Molecular function: nitrous-oxide reductase activity (inferred from electronic annotation from HAMAP).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
HAMAP MF_00716; -; 1.
PBIL [Tree]
InterPro IPR001505; Copper_CuA.
IPR002429; COX2_C.
IPR008972; Cupredoxin.
IPR006311; Tat.
IPR015943; WD40/YVTN_repeat-like.
Graphical view of domain structure.
Gene3D G3DSA:2.60.40.420; Cupredoxin; 1.
G3DSA:2.130.10.10; WD40/YVTN_repeat-like; 1.
Pfam PF00116; COX2; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR01409; TAT_signal_seq; 1.
PROSITE PS00078; COX2; FALSE_NEG.
PS50857; COX2_CUA; 1.
PS51318; TAT; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q89XJ6.
ProtoNet Q89XJ6.
Genome annotation databases
GeneID 1052167; -.
GenomeReviews BA000040_GR; blr0315.
KEGG bja:blr0315; -.
NMPDR fig|224911.1.peg.315; -.
Phylogenomic databases
HOGENOM Q89XJ6; -.
Genome annotation databases
CMR Q89XJ6; blr0315.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Complete proteome; Copper; Metal-binding; Oxidoreductase; Periplasm; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    46  46     Tat-type signal (Potential). 
CHAIN   47   650  604     Nitrous-oxide reductase. PRO_0000019824
REGION   552   650  99     COX2-like. 
METAL   147   147        Copper Z2 (By similarity). 
METAL   148   148        Copper Z3 (By similarity). 
METAL   196   196        Copper Z2 (By similarity). 
METAL   273   273        Calcium 2; via carbonyl oxygen (By similarity). 
METAL   276   276        Calcium 2 (By similarity). 
METAL   284   284        Calcium 2; via carbonyl oxygen (By similarity). 
METAL   290   290        Calcium 2 (By similarity). 
METAL   335   335        Calcium 2 (By similarity). 
METAL   337   337        Copper Z1 (By similarity). 
METAL   392   392        Copper Z1 (By similarity). 
METAL   443   443        Copper Z3 (By similarity). 
METAL   464   464        Calcium 1; via carbonyl oxygen (By similarity). 
METAL   479   479        Calcium 1 (By similarity). 
METAL   504   504        Copper Z4 (By similarity). 
METAL   593   593        Copper A1 (By similarity). 
METAL   628   628        Copper A1 (By similarity). 
METAL   628   628        Copper A2 (By similarity). 
METAL   630   630        Copper A2; via carbonyl oxygen (By similarity). 
METAL   632   632        Copper A1 (By similarity). 
METAL   632   632        Copper A2 (By similarity). 
METAL   636   636        Copper A2 (By similarity). 
METAL   639   639        Copper A1 (By similarity). 
CONFLICT   367   367        D -> N (in Ref. 1; CAA05518). 
Sequence information
Length: 650 AA [This is the length of the unprocessed precursor] Molecular weight: 71674 Da [This is the MW of the unprocessed precursor] CRC64: 1B6C547D90501C5B [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MSDSDNIKGV SRRTLLGTTA AAAGVGLAGG AVVTKDGAGF VSTADAQTKS AAPKAPPARP 

        70         80         90        100        110        120 
AVQKTEVAPG ELDEYYVFFS SGQSGEMRII GLPSMRELMR VPVFNRCSAT GWGQTNESLK 

       130        140        150        160        170        180 
VLTEGMQPAT REFLKNRGGT FMNGDLHHPH VSFTDGTYDG RYAFMNDKAN SRVARVRLDV 

       190        200        210        220        230        240 
MKCDKIIELP NQHTVHGLRL QKYPRTGYVF CNGEDGVPLP NDGKVLDNPK EYHSIFTALD 

       250        260        270        280        290        300 
GDTMKVAWQV MVSGNLDNVD SDYQGKYCFS TCYNAEEGVT LAEMTANEQD WVVIFNLKRI 

       310        320        330        340        350        360 
EEAVKKGDFK EMNGVPVIDG RKGSPYTRYV PVSNNPHGMN TAPDGIHIVA AGKLSPTVTV 

       370        380        390        400        410        420 
MDVRLFDQLF DDKIKPRDVV VAEPELGLGP LHTAYDGKGN AYTTLFLDSQ VVKWNIDLAK 

       430        440        450        460        470        480 
RAFKGEKVDP IIQKLDVHYQ PGHNHSSMGQ TKEADGKWLI SLNKFSKDRF LNVGPLKPEN 

       490        500        510        520        530        540 
DQLIDISGDQ MKLVHDGPSF AEPHDATIVH RSKINPISIW DRADPMFADA VKQAKADGIN 

       550        560        570        580        590        600 
LEADSKIIRD GNKVRVYMTS TAPAFGLEQF QVKQGDQVTV YITNIDAVED LTHGFCIVNY 

       610        620        630        640        650 
GIQMEVAPMA TASVSFSADK AGVYWYYCSW FCHAMHMEMK GRMFVEPKSV
Q89XJ6 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA) 		Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Hosted by au flag APAF Australia Mirror sites: Brazil Canada China Korea Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!