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UniProtKB/Swiss-Prot entry Q89WI1

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name SYFA_BRAJA
Primary accession number Q89WI1
Secondary accession numbers None
Integrated into Swiss-Prot on January 16, 2004
Sequence was last modified on June 1, 2003 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 36)
Name and origin of the protein
Protein name Phenylalanyl-tRNA synthetase alpha chain
Synonyms EC 6.1.1.20
Phenylalanine--tRNA ligase alpha chain
PheRS
Gene name
Name: pheS
OrderedLocusNames: bll0706
From
Bradyrhizobium japonicum [TaxID: 375] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=USDA 110;
DOI=10.1093/dnares/9.6.189; PubMed=12597275 [NCBI, ExPASy, EBI, Israel, Japan]
Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S.;
"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110.";
DNA Res. 9:189-197(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BA000040; BAC45971.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_767346.1; -.
3D structure databases
HSSP P27001; 1JJC. [HSSP ENTRY / PDB]
ModBase Q89WI1.
Enzyme and pathway databases
BioCyc BJAP224911:BLL0706-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0005524; Molecular function: ATP binding (inferred from electronic annotation from HAMAP).
GO:0000287; Molecular function: magnesium ion binding (inferred from electronic annotation from HAMAP).
GO:0004826; Molecular function: phenylalanine-tRNA ligase activity (inferred from electronic annotation from HAMAP).
GO:0006432; Biological process: phenylalanyl-tRNA aminoacylation (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00281; -; 1.
PBIL [Tree]
InterPro IPR006195; aa-tRNA-synth_II.
IPR002319; Phe-tRNA-synth_IIc.
IPR004529; Phe-tRNA-synth_IIc_asu.
IPR004188; Phe-tRNA_synth_II_N.
Graphical view of domain structure.
PANTHER PTHR11538; tRNA-synt_2d; 1.
Pfam PF02912; Phe_tRNA-synt_N; 1.
PF01409; tRNA-synt_2d; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR00468; pheS; 1.
PROSITE PS50862; AA_TRNA_LIGASE_II; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q89WI1.
ProtoNet Q89WI1.
Genome annotation databases
GeneID 1049230; -.
GenomeReviews BA000040_GR; bll0706.
KEGG bja:bll0706; -.
NMPDR fig|224911.1.peg.706; -.
Phylogenomic databases
HOGENOM Q89WI1; -.
Genome annotation databases
CMR Q89WI1; bll0706.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm; Ligase; Magnesium; Metal-binding; Nucleotide-binding; Protein biosynthesis.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   360  360     Phenylalanyl-tRNA synthetase alpha chain. PRO_0000126673
METAL   260   260        Magnesium (By similarity). 
Sequence information
Length: 360 AA [This is the length of the unprocessed precursor] Molecular weight: 40098 Da [This is the MW of the unprocessed precursor] CRC64: 45C7DD3342D953B3 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MSDLATLETS ILDQVAAAGD EAALEAVRVA ALGKKGSISA LLATLGKMSP DDRKTQGAAI 

        70         80         90        100        110        120 
NQAKDKVTEA LAARRDVLKS AALDARLASE TIDVTLPLRE APTDAGRIHP LSQVWDELTT 

       130        140        150        160        170        180 
IFADMGFSVA EGPDIETDDY NFTKLNFPEG HPAREMHDTF FFHPKEDGSR MLLRTHTSPV 

       190        200        210        220        230        240 
QVRTMLSQKP PIRVICPGRT YRIDSDATHT PQFHQVEGLV IDKHSHLGHL KWILHEFCKA 

       250        260        270        280        290        300 
FFEVDHINMR FRPSFFPFTE PSLEVDIQCR RDKGEIRFGE GEDWLEILGC GMVHPNVLRA 

       310        320        330        340        350        360 
CGIDPDEYQG FAWGMGIDRI AMLKYGIADL RQLFDSDVRW LSHYGFKPLE VPTLAGGLSS
Q89WI1 in FASTA format

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