NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=USDA 110;
DOI=10.1093/dnares/9.6.189; PubMed=12597275 [NCBI, ExPASy, EBI, Israel, Japan]
Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S.;
"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110.";
DNA Res. 9:189-197(2002).

Comments

FUNCTION: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein (By similarity).
CATALYTIC ACTIVITY: UTP + [protein-PII] = diphosphate + uridylyl-[protein-PII].
SIMILARITY: Belongs to the glnD family.

Copyright

Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.

Cross-references

Sequence databases

EMBL

BA000040; BAC46181.1; ALT_INIT; Genomic_DNA.

[EMBL / GenBank / DDBJ] [CoDingSequence]

RefSeq

NP_767556.1; -.

3D structure databases

ModBase

Q89VX9.

Enzyme and pathway databases

BioCyc

BJAP224911:BLL0916-MON; -.

Ontologies

GO:0008773;	Molecular function: [protein-PII] uridylyltransferase activity (inferred from electronic annotation from HAMAP).
GO:0016597;	Molecular function: amino acid binding (inferred from electronic annotation from InterPro).
GO:0009399;	Biological process: nitrogen fixation (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.

Family and domain databases

HAMAP

MF_00277; -; 1.
PBIL [Tree]

InterPro

IPR002912; ACT_bd.
IPR013546; GlnD_UR_UTase.
IPR010043; GlnD_Uridyltrans.
IPR003607; Met-dep_phosphohydro_HD.
IPR006674; Met-dep_phosphohydro_HD_sub.
Graphical view of domain structure.

PANTHER

PTHR13734:SF1; GlnD_Uridyltrans; 1.

Pfam

PF01842; ACT; 2.
PF08335; GlnD_UR_UTase; 1.
PF01966; HD; 1.
Pfam graphical view of domain structure.

PIRSF

PIRSF006288; PII_uridyltransf; 1.

SMART

SM00471; HDc; 1.
SMART graphical view of domain structure.

TIGRFAMs

TIGR01693; UTase_glnD; 1.

Genome annotation databases

GeneID

1049859; -.

GenomeReviews

BA000040_GR; bll0916.

KEGG

bja:bll0916; -.

NMPDR

fig|224911.1.peg.916; -.

Phylogenomic databases

HOGENOM

Q89VX9; -.

Genome annotation databases

CMR

Q89VX9; bll0916.

Other

UniRef

View cluster of proteins with at least 50% / 90% / 100% identity.

Keywords

Complete proteome; Nitrogen fixation; Nucleotidyltransferase; Transferase.

Features

Feature table viewer

`Key`	`From To`	`Length`		`Description`	`FTId`
`CHAIN`	`1 929`	`929`		`[Protein-PII] uridylyltransferase.`	`PRO_0000192721`

Sequence information

Length: 929 AA [This is the length of the unprocessed precursor]

Molecular weight: 105033 Da [This is the MW of the unprocessed precursor]

CRC64: E4A270C497C26D5E [This is a checksum on the sequence]

        10         20         30         40         50         60 
MDSVTTEHKQ EVDDRFDTAR ITAAVDALAE KHQGREDAFR TAMAQLLKAE LIAARAAAQA 

        70         80         90        100        110        120 
ILLKDRHGRR CAERLCHVQD EIIRILYSAA TRHLYRSPIP SGAERMAVVA TGGYGRGLMA 

       130        140        150        160        170        180 
PESDIDLLFI LPYKQTAWGE QVAEAILYCL WDMGLKVGHA TRSVDESIRQ ARGDMTIRTA 

       190        200        210        220        230        240 
ILETRFLTGD QPLYDELVER FDKEVVQGTA SEFVTAKLAE REERHRRGGQ SRYLVEPNVK 

       250        260        270        280        290        300 
DGKGALRDLH TLFWIAKYVY RVRDTDELVE RGVFDAQEYR TFRRCADFLW SVRCNLHFYS 

       310        320        330        340        350        360 
GRAEERLSFD LQREIAVRLG YTSHPGMQDV ERFMKHYFLV AKEVGNLTAI LCAKLEDQQA 

       370        380        390        400        410        420 
KPAPVLSRMM ARLRPTPAKR RVPDSDDFIV DNNRINVAAP DVFKHDPVNL IRIFRLAQKH 

       430        440        450        460        470        480 
NLAFHPDAMR DVTRSLGLIN AQLRENPEAN RLFMEILTSD NAEIVLRRMN ETGVLGHFIR 

       490        500        510        520        530        540 
AFGKIVSMMQ FNMYHHYTVD EHLIRCVGFL QDIERGGIEE FAVASDLMRK IRPEHRSVIY 

       550        560        570        580        590        600 
IATLLHDVAK GRPEDHSIAG AKVARRLCPR LGFSPADTEL VAWLIEEHLT MSTVAQSRDL 

       610        620        630        640        650        660 
SDRKTIENFA AVVQSVEQMK LLTILTTADI RGVGPGVWNG WKAQLLRSLY YETEPVLTGG 

       670        680        690        700        710        720 
FSEVDRGKRL TAAYAEFRNA FAEWPADELD AYIARHYPAY WLKVELPRKI RHARFVRSSE 

       730        740        750        760        770        780 
QAGHKLAINV GFDEVRGVTE LTIFAADHPW LLSIIAGACA SAGANIVDAQ IYTTTDGRAL 

       790        800        810        820        830        840 
DTISISREYD RDEDEGRRAT RIGEMIEDVL EGKLRLPEVV ARRTVRSKAR PFVIEPEVTI 

       850        860        870        880        890        900 
NNQWSDRYTV IEVSGLDRPG LLYELTTAIS KLNLNIASAH VATFGERARD VFYVTDLLGA 

       910        920 
QINAPTRQSA IKSALTHVMA GDKAVQPAA

Q89VX9 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
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	BLAST submission on ExPASy/SIB or at NCBI (USA)		Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
	ScanProsite, MotifScan		Submit a homology modeling request to SWISS-MODEL
	NPSA Sequence analysis tools