NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=USDA 110;
DOI=10.1093/dnares/9.6.189; PubMed=12597275 [NCBI, ExPASy, EBI, Israel, Japan]
Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S.;
"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110.";
DNA Res. 9:189-197(2002).

Comments

CATALYTIC ACTIVITY: Coproporphyrinogen-III + O₂ + 2 H⁺ = protoporphyrinogen-IX + 2 CO₂ + 2 H₂O.
PATHWAY: Porphyrin metabolism; protoporphyrin-IX biosynthesis; protoporphyrinogen-IX from coproporphyrinogen III (O2 route): step 1/1 .
SUBCELLULAR LOCATION: Cytoplasm (By similarity).
SIMILARITY: Belongs to the aerobic coproporphyrinogen III oxidase family.

Copyright

Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.

Cross-references

Sequence databases

EMBL

BA000040; BAC47746.1; -; Genomic_DNA.

[EMBL / GenBank / DDBJ] [CoDingSequence]

RefSeq

NP_769121.1; -.

3D structure databases

ModBase

Q89SC2.

Enzyme and pathway databases

BioCyc

BJAP224911:BLL2481-MON; -.

Ontologies

GO:0005737;	Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004109;	Molecular function: coproporphyrinogen oxidase activity (inferred from electronic annotation from HAMAP).
GO:0055114;	Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0006779;	Biological process: porphyrin biosynthetic process (inferred from electronic annotation from HAMAP).
QuickGo view.

Family and domain databases

HAMAP

MF_00333; -; 1.
PBIL [Tree]

InterPro

IPR001260; Coprogen_oxidas.
Graphical view of domain structure.

Gene3D

G3DSA:3.40.1500.10; Coprogen_oxidas; 1.

PANTHER

PTHR10755; Coprogen_oxidas; 1.

Pfam

PF01218; Coprogen_oxidas; 1.
Pfam graphical view of domain structure.

PIRSF

PIRSF000166; Coproporphyri_ox; 1.

PRINTS

PR00073; COPRGNOXDASE.

PROSITE

PS01021; COPROGEN_OXIDASE; 1.

Genome annotation databases

GeneID

1050400; -.

GenomeReviews

BA000040_GR; bll2481.

KEGG

bja:bll2481; -.

NMPDR

fig|224911.1.peg.2481; -.

Phylogenomic databases

HOGENOM

Q89SC2; -.

Genome annotation databases

CMR

Q89SC2; bll2481.

Other

UniRef

View cluster of proteins with at least 50% / 90% / 100% identity.

Keywords

Complete proteome; Cytoplasm; Oxidoreductase; Porphyrin biosynthesis.

Features

Feature table viewer

`Key`	`From To`	`Length`		`Description`	`FTId`
`CHAIN`	`1 316`	`316`		`Coproporphyrinogen 3 oxidase, aerobic.`	`PRO_0000109886`

Sequence information

Length: 316 AA [This is the length of the unprocessed precursor]

Molecular weight: 35498 Da [This is the MW of the unprocessed precursor]

CRC64: 8698744018E989CF [This is a checksum on the sequence]

        10         20         30         40         50         60 
MVGTAQGRLC PPYGRSVREL NMDVSTIEDR KTRARAWFEA LRDDICASFE RLEDDAPQGL 

        70         80         90        100        110        120 
YPGEAGRFTR TPWQRTDHSG AAGGGGVMSM MSGRLFEKVG VHCSTVHGEF APEFRAQIPG 

       130        140        150        160        170        180 
AADDPRFWAS GISLIAHLRN PHVPAVHMNT RFVVTTKAWF GGGADLTPVL DRRRTQDDAD 

       190        200        210        220        230        240 
SIAFHAAMKE ACVQPNGVAD YDKYKKWCDE YFYLPHRKEA RGIGGIFYDW HDSGDWDADL 

       250        260        270        280        290        300 
AFTQDVGRAF LKIYPDIVRR NFASAWTAAD REEQLIRRGR YVEFNLLYDR GTIFGLKTGG 

       310 
NVDSILSSLP PEVKWP

Q89SC2 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

	BLAST submission on ExPASy/SIB or at NCBI (USA)		Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
	ScanProsite, MotifScan		Submit a homology modeling request to SWISS-MODEL
	NPSA Sequence analysis tools