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UniProtKB/Swiss-Prot entry Q89MP9

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name SYD_BRAJA
Primary accession number Q89MP9
Secondary accession numbers None
Integrated into Swiss-Prot on April 26, 2004
Sequence was last modified on June 1, 2003 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 40)
Name and origin of the protein
Protein name Aspartyl-tRNA synthetase
Synonyms EC 6.1.1.12
Aspartate--tRNA ligase
AspRS
Gene name
Name: aspS
OrderedLocusNames: blr4143
From
Bradyrhizobium japonicum [TaxID: 375] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=USDA 110;
DOI=10.1093/dnares/9.6.189; PubMed=12597275 [NCBI, ExPASy, EBI, Israel, Japan]
Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S.;
"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110.";
DNA Res. 9:189-197(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BA000040; BAC49408.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_770783.1; -.
3D structure databases
ModBase Q89MP9.
Enzyme and pathway databases
BioCyc BJAP224911:BLR4143-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004815; Molecular function: aspartate-tRNA ligase activity (inferred from electronic annotation from HAMAP).
GO:0005524; Molecular function: ATP binding (inferred from electronic annotation from HAMAP).
GO:0003676; Molecular function: nucleic acid binding (inferred from electronic annotation from InterPro).
GO:0006422; Biological process: aspartyl-tRNA aminoacylation (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00044; -; 1.
PBIL [Tree]
InterPro IPR004364; aa-tRNA-synt_II.
IPR006195; aa-tRNA-synth_II.
IPR002312; Asp-tRNA-synth_IIb.
IPR004524; Asp-tRNA-synth_IIb_bac/mito.
IPR004115; GAD.
IPR012340; NA-bd_OB-fold.
IPR004365; NA_bd_OB_tRNA-helicase.
Graphical view of domain structure.
Gene3D G3DSA:2.40.50.140; OB_NA_bd_sub; 1.
PANTHER PTHR22594; aa-tRNA-synt_II; 1.
PTHR22594:SF5; AspS_bac; 1.
Pfam PF02938; GAD; 1.
PF00152; tRNA-synt_2; 1.
PF01336; tRNA_anti; 1.
Pfam graphical view of domain structure.
PRINTS PR01042; TRNASYNTHASP.
TIGRFAMs TIGR00459; aspS_bact; 1.
PROSITE PS50862; AA_TRNA_LIGASE_II; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q89MP9.
ProtoNet Q89MP9.
Genome annotation databases
GeneID 1054376; -.
GenomeReviews BA000040_GR; blr4143.
KEGG bja:blr4143; -.
NMPDR fig|224911.1.peg.4143; -.
Phylogenomic databases
HOGENOM Q89MP9; -.
Genome annotation databases
CMR Q89MP9; blr4143.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm; Ligase; Nucleotide-binding; Protein biosynthesis.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   590  590     Aspartyl-tRNA synthetase. PRO_0000110840
Sequence information
Length: 590 AA [This is the length of the unprocessed precursor] Molecular weight: 66690 Da [This is the MW of the unprocessed precursor] CRC64: 7213E9ECDB8DB7D2 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MHRYRSHTCG ALRESNIGET IRLSGWVHRV RDHGGVLFID LRDHYGLTQC VVDPDSPAFS 

        70         80         90        100        110        120 
LAEKLRSEFV IKMDGKVRRR PEGTDNDDLP TGKIEIYVSE IEVLGPAGDL PLPVFGDQEY 

       130        140        150        160        170        180 
PEDIRLKYRF LDLRREKLHQ NIMTRVEIIK SMRRRMEGQG FFEFNTPILT ASSPEGARDF 

       190        200        210        220        230        240 
LVPSRIHPGK FYALPQAPQQ YKQLLMMSGF DRYFQIAPCF RDEDPRADRL PGEFYQLDVE 

       250        260        270        280        290        300 
MSFVTQEDVF AAMEPVITGV FEEFAKGKPV SKNWRRIPFA EALRKYGSDK PDLRNPIEMQ 

       310        320        330        340        350        360 
EVSEHFRGSG FKVFARMLED PKNQVWAIPA PGGGSRAFCD RMNSWAQGEG QPGLGYIMWR 

       370        380        390        400        410        420 
EGGEGAGPLA NNIGPERTAA IRAQIGVKEG DAAFFVAGDP DKFWKFSGLA RNKVGEELNL 

       430        440        450        460        470        480 
TDKERFELAW IVDFPMYEYN EDDKKVDFSH NPFSMPQGGL EALKGQDPLT IKAFQYDITC 

       490        500        510        520        530        540 
NGYEIASGGI RNHVPEAMVK AFEIAGYGEQ EVVDRFGGMY RAFQYGAPPH GGMAAGVDRI 

       550        560        570        580        590 
VMLLCGTTNL REISLFPMNQ QAMDLLMGAP SEATTKQLRE LHVRVNLPQK
Q89MP9 in FASTA format

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