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UniProtKB/Swiss-Prot entry Q89B29

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name RSMD_BUCBP
Primary accession number Q89B29
Secondary accession numbers None
Integrated into Swiss-Prot on April 13, 2004
Sequence was last modified on June 1, 2003 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 36)
Name and origin of the protein
Protein name Ribosomal RNA small subunit methyltransferase D
Synonyms EC 2.1.1.52
rRNA (guanine-N(2)-)-methyltransferase
16S rRNA m2G966 methyltransferase
Gene name
Name: rsmD
OrderedLocusNames: bbp_025
From
Buchnera aphidicola subsp. Baizongia pistaciae [TaxID: 135842] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Buchnera.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1073/pnas.0235981100; PubMed=12522265 [NCBI, ExPASy, EBI, Israel, Japan]
van Ham R.C.H.J., Kamerbeek J., Palacios C., Rausell C., Abascal F., Bastolla U., Fernandez J.M., Jimenez L., Postigo M., Silva F.J., Tamames J., Viguera E., Latorre A., Valencia A., Moran F., Moya A.;
"Reductive genome evolution in Buchnera aphidicola.";
Proc. Natl. Acad. Sci. U.S.A. 100:581-586(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE016826; AAO26768.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_777663.1; -.
3D structure databases
ModBase Q89B29.
Enzyme and pathway databases
BioCyc BAPH224915:BBP_025-MON; -.
Ontologies
GO
GO:0003676; Molecular function: nucleic acid binding (inferred from electronic annotation from InterPro).
GO:0008990; Molecular function: rRNA (guanine-N2-)-methyltransferase activity (inferred from electronic annotation from EC).
GO:0032259; Biological process: methylation (inferred from electronic annotation from InterPro).
GO:0006364; Biological process: rRNA processing (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR004398; CHP00095.
IPR016065; DUF_methylase.
IPR002052; N6_adenine_Mtase_CS.
Graphical view of domain structure.
Pfam PF03602; Cons_hypoth95; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF004553; CHP00095; 1.
TIGRFAMs TIGR00095; CHP95; 1.
PROSITE PS00092; N6_MTASE; 1.
BLOCKS Q89B29.
ProtoNet Q89B29.
Genome annotation databases
GeneID 1058366; -.
GenomeReviews AE016826_GR; bbp_025.
KEGG bab:bbp025; -.
Phylogenomic databases
HOGENOM Q89B29; -.
Genome annotation databases
CMR Q89B29; bbp_025.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Methyltransferase; rRNA processing; S-adenosyl-L-methionine; Transferase.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   196  196     Ribosomal RNA small subunit methyltransferase D. PRO_0000216244
Sequence information
Length: 196 AA [This is the length of the unprocessed precursor] Molecular weight: 22811 Da [This is the MW of the unprocessed precursor] CRC64: 6967D74F4A27C737 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MKILKKKSKI TSIQIISGKY KNSRIPIINT KNLRPTTNYI RETLFNWISN EKIKKSHCLD 

        70         80         90        100        110        120 
CFSGSGALGI EAVSRYALSS TCIEIQKKAI FFLKKILIKL SITNVHVIRA NTIQWLKKPN 

       130        140        150        160        170        180 
KSYDIIFLDP PFKTTLLKQT IALLIKNNWL KNNALIYIEQ ENTLNKLITP PNNWILKKEK 

       190 
KTKKIHYSLY MNVNNF
Q89B29 in FASTA format

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