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UniProtKB/Swiss-Prot entry Q88RQ6

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name HEM6_PSEPK
Primary accession number Q88RQ6
Secondary accession numbers None
Integrated into Swiss-Prot on November 14, 2003
Sequence was last modified on June 1, 2003 (Sequence version 1)
Annotations were last modified on    November 4, 2008 (Entry version 39)
Name and origin of the protein
Protein name Coproporphyrinogen 3 oxidase, aerobic
Synonyms EC 1.3.3.3
Coproporphyrinogen III oxidase, aerobic
Coproporphyrinogenase
Coprogen oxidase
Gene name
Name: hemF
OrderedLocusNames: PP_0073
From
Pseudomonas putida (strain KT2440) [TaxID: 160488] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1046/j.1462-2920.2002.00366.x; PubMed=12534463 [NCBI, ExPASy, EBI, Israel, Japan]
Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H., Martins dos Santos V.A.P., Fouts D.E., Gill S.R., Pop M., Holmes M., Brinkac L.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Kolonay J.F., Madupu R., Nelson W.C., White O., Peterson J.D., Khouri H.M., Hance I., Chris Lee P., Holtzapple E.K., Scanlan D., Tran K., Moazzez A., Utterback T.R., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N., Duesterhoeft A., Tuemmler B., Fraser C.M.;
"Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.";
Environ. Microbiol. 4:799-808(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE015451; AAN65707.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_742243.1; -.
3D structure databases
SMR Q88RQ6; 1-301.
ModBase Q88RQ6.
Enzyme and pathway databases
BioCyc PPUT160488:PP_0073-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004109; Molecular function: coproporphyrinogen oxidase activity (inferred from electronic annotation from HAMAP).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0006779; Biological process: porphyrin biosynthetic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00333; -; 1.
PBIL [Tree]
InterPro IPR001260; Coprogen_oxidas.
Graphical view of domain structure.
Gene3D G3DSA:3.40.1500.10; Coprogen_oxidas; 1.
PANTHER PTHR10755; Coprogen_oxidas; 1.
Pfam PF01218; Coprogen_oxidas; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000166; Coproporphyri_ox; 1.
PRINTS PR00073; COPRGNOXDASE.
PROSITE PS01021; COPROGEN_OXIDASE; 1.
BLOCKS Q88RQ6.
ProtoNet Q88RQ6.
Genome annotation databases
GeneID 1043554; -.
GenomeReviews AE015451_GR; PP_0073.
KEGG ppu:PP_0073; -.
NMPDR fig|160488.1.peg.73; -.
TIGR PP_0073; -.
Phylogenomic databases
HOGENOM Q88RQ6; -.
Other
LinkHub Q88RQ6; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; Oxidoreductase; Porphyrin biosynthesis.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   303  303     Coproporphyrinogen 3 oxidase, aerobic. PRO_0000109911
Sequence information
Length: 303 AA [This is the length of the unprocessed precursor] Molecular weight: 34393 Da [This is the MW of the unprocessed precursor] CRC64: 1B3BCDE865A949F2 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MTSRTEAVKA YLLDLQDRIC SALETEDGGA RFVEDAWVRE AGGGGRTRVI GEGNVIEKGG 

        70         80         90        100        110        120 
VNFSHVFGSG LPPSASAHRP ELAGRGFEAL GVSLVIHPHN PHVPTSHANV RFFIAEKEGE 

       130        140        150        160        170        180 
EAVWWFGGGF DLTPYYGNEE DCIHWHRVAE QACAPFGADV YPRYKAWCDR YFHLKHRGEP 

       190        200        210        220        230        240 
RGIGGLFFDD LNEWDFDTCF AFIRAIGDAF VDAYLPIVQR RKNTPYTPQQ REFQEYRRGR 

       250        260        270        280        290        300 
YVEFNLVYDR GTLFGLQSGG RTESILMSLP PQVRWGYDWK AAPGSEEARL TEYFLQDRDW 


LGQ
Q88RQ6 in FASTA format

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