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UniProtKB/Swiss-Prot entry Q88QS2


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name GPH_PSEPK
Primary accession number Q88QS2
Secondary accession numbers None
Integrated into Swiss-Prot on May 30, 2006
Sequence was last modified on June 1, 2003 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 28)
Name and origin of the protein
Protein name Phosphoglycolate phosphatase
Synonyms PGPase
PGP
EC 3.1.3.18
Gene name
OrderedLocusNames: PP_0416
From
Pseudomonas putida (strain KT2440) [TaxID: 160488] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1046/j.1462-2920.2002.00366.x; PubMed=12534463 [NCBI, ExPASy, EBI, Israel, Japan]
Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H., Martins dos Santos V.A.P., Fouts D.E., Gill S.R., Pop M., Holmes M., Brinkac L.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Kolonay J.F., Madupu R., Nelson W.C., White O., Peterson J.D., Khouri H.M., Hance I., Chris Lee P., Holtzapple E.K., Scanlan D., Tran K., Moazzez A., Utterback T.R., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N., Duesterhoeft A., Tuemmler B., Fraser C.M.;
"Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.";
Environ. Microbiol. 4:799-808(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE015451; AAN66046.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_742582.1; -.
3D structure databases
ModBase Q88QS2.
Enzyme and pathway databases
BioCyc PPUT160488:PP_0416-MON; -.
Ontologies
GO
GO:0008967; Molecular function: phosphoglycolate phosphatase activity (inferred from electronic annotation from HAMAP).
GO:0005975; Biological process: carbohydrate metabolic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00495; -; 1.
PBIL [Tree]
InterPro IPR005834; Dehalogen-like_hydro.
IPR006439; HAD-SF_hydro_IA_v1.
IPR006402; HAD-SF_hydro_IA_v3.
IPR005833; Haloacid_DHase/epoxide_hydro.
IPR006346; PGP_bact.
Graphical view of domain structure.
Pfam PF00702; Hydrolase; 1.
Pfam graphical view of domain structure.
PRINTS PR00413; HADHALOGNASE.
TIGRFAMs TIGR01549; HAD-SF-IA-v1; 1.
TIGR01509; HAD-SF-IA-v3; 1.
TIGR01449; PGP_bact; 1.
BLOCKS Q88QS2.
ProtoNet Q88QS2.
Genome annotation databases
GeneID 1044138; -.
GenomeReviews AE015451_GR; PP_0416.
KEGG ppu:PP_0416; -.
NMPDR fig|160488.1.peg.412; -.
TIGR PP_0416; -.
Phylogenomic databases
HOGENOM Q88QS2; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Carbohydrate metabolism; Complete proteome; Hydrolase.
Features
SEVIEWER logo Feature table viewer
KeyFrom  To Length Description FTId
CHAIN   1   272  272     Phosphoglycolate phosphatase. PRO_0000238168
ACT_SITE   19    19        Nucleophile (By similarity). 
Sequence information
Length: 272 AA [This is the length of the unprocessed precursor] Molecular weight: 29604 Da [This is the MW of the unprocessed precursor] CRC64: 1D91E2F4885ADED9 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSGFEQLFPG TLPRLVMFDL DGTLIDSVPD LAAAVDRMLL ELGRPPAGLE AVRHWVGNGA 

        70         80         90        100        110        120 
QVLVRRALAG GIDHADVDDA LAEQALALFM DAYAESHELT VVYPGVRDTL RWLRKQGVEM 

       130        140        150        160        170        180 
ALITNKPERF VGPLLDQMKI GNFFRWIIGG DTLPQKKPDP AALLFVMQMA GVTPQQSLFV 

       190        200        210        220        230        240 
GDSRSDVQAA KAAGVQCVGL TYGYNHGRPI DAESPSLVID DLRALLPGCA DPATGITLAD 

       250        260        270 
LQASQDREST VAVTGKFWMK VIKALARWRW RA 

Q88QS2 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

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