ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry Q88PP0


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name HMP_PSEPK
Primary accession number Q88PP0
Secondary accession numbers None
Integrated into Swiss-Prot on September 13, 2004
Sequence was last modified on June 1, 2003 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 38)
Name and origin of the protein
Protein name Flavohemoprotein
Synonyms Hemoglobin-like protein
Flavohemoglobin
Nitric oxide dioxygenase
NO oxygenase
NOD
EC 1.14.12.17
Gene name
Name: hmp
Synonyms: hmpA
OrderedLocusNames: PP_0808
From
Pseudomonas putida (strain KT2440) [TaxID: 160488] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1046/j.1462-2920.2002.00366.x; PubMed=12534463 [NCBI, ExPASy, EBI, Israel, Japan]
Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H., Martins dos Santos V.A.P., Fouts D.E., Gill S.R., Pop M., Holmes M., Brinkac L.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Kolonay J.F., Madupu R., Nelson W.C., White O., Peterson J.D., Khouri H.M., Hance I., Chris Lee P., Holtzapple E.K., Scanlan D., Tran K., Moazzez A., Utterback T.R., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N., Duesterhoeft A., Tuemmler B., Fraser C.M.;
"Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.";
Environ. Microbiol. 4:799-808(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE015451; AAN66433.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_742969.1; -.
3D structure databases
HSSP P04252; 4VHB. [HSSP ENTRY / PDB]
ModBase Q88PP0.
Enzyme and pathway databases
BioCyc PPUT160488:PP_0808-MON; -.
Ontologies
GO
GO:0009055; Molecular function: electron carrier activity (inferred from electronic annotation from InterPro).
GO:0020037; Molecular function: heme binding (inferred from electronic annotation from InterPro).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from InterPro).
GO:0008941; Molecular function: nitric oxide dioxygenase activity (inferred from electronic annotation from HAMAP).
GO:0019825; Molecular function: oxygen binding (inferred from electronic annotation from InterPro).
GO:0005344; Molecular function: oxygen transporter activity (inferred from electronic annotation from HAMAP).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0015671; Biological process: oxygen transport (inferred from electronic annotation from HAMAP).
GO:0009636; Biological process: response to toxin (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
HAMAP MF_01252; -; 1.
PBIL [Tree]
InterPro IPR012292; Globin.
IPR000971; Globin_subset.
IPR008333; OxRdtase_FAD-bd.
IPR001433; OxRdtase_FAD/NAD_bd.
IPR000951; Ph_dOase_redase_FPNCR.
Graphical view of domain structure.
Gene3D G3DSA:1.10.490.10; Globin_related; 1.
Pfam PF00970; FAD_binding_6; 1.
PF00042; Globin; 1.
PF00175; NAD_binding_1; 1.
Pfam graphical view of domain structure.
PRINTS PR00409; PHDIOXRDTASE.
PROSITE PS51384; FAD_FR; 1.
PS01033; GLOBIN; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q88PP0.
ProtoNet Q88PP0.
Genome annotation databases
GeneID 1044654; -.
GenomeReviews AE015451_GR; PP_0808.
KEGG ppu:PP_0808; -.
NMPDR fig|160488.1.peg.799; -.
TIGR PP_0808; -.
Phylogenomic databases
HOGENOM Q88PP0; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Detoxification; FAD; Flavoprotein; Heme; Iron; Metal-binding; NAD; NADP; Oxidoreductase; Oxygen transport; Transport.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   392  392     Flavohemoprotein. PRO_0000052440
DOMAIN   153   256  104     FAD-binding FR-type. 
NP_BIND   205   208  4     FAD (By similarity). 
NP_BIND   268   273  6     NADP (By similarity). 
NP_BIND   384   387  4     FAD (By similarity). 
REGION   1   139  139     Globin. 
REGION   150   392  243     Reductase. 
REGION   260   392  133     NAD or NADP-binding. 
ACT_SITE   95    95        Charge relay system (By similarity). 
ACT_SITE   138   138        Charge relay system (By similarity). 
METAL   85    85        Iron (heme proximal ligand) (By similarity). 
BINDING   191   191        FAD (By similarity). 
SITE   29    29  1     Involved in heme-bound ligand stabilization and O-O bond activation (By similarity). 
SITE   84    84  1     Influences the redox potential of the prosthetic heme and FAD groups (By similarity). 
SITE   383   383  1     Influences the redox potential of the prosthetic heme and FAD groups (By similarity). 
Sequence information
Length: 392 AA [This is the length of the unprocessed precursor] Molecular weight: 43127 Da [This is the MW of the unprocessed precursor] CRC64: 81BE6B3D092EDA7C [This is a checksum on the sequence]
        10         20         30         40         50         60 
MLNAEQRAII KATVPLLESG GEALTTHFYK MMLSEYPEVR PLFNQAHQAS GDQPRALANG 

        70         80         90        100        110        120 
VLMYARHIDQ LEQLGGLVGQ IINKHVALQI LPEHYPIVGS CLLRAIEEVL GKDIATPAVI 

       130        140        150        160        170        180 
DAWGAAYGQL ADILIGAEEN LYKEKEEAEG GWRGTREFRL VRREQESSEI VSFYFAPVDG 

       190        200        210        220        230        240 
MPVLKAEPGQ YIGLKLDIDG AEQRRNYSLS ALCDGKEYRI SVKREAGGKV SNYLHDELKV 

       250        260        270        280        290        300 
GDTLQLFPPA GDFTLAASDK PLVLISGGVG ITPTLAMLQA ALQTRREVHF IHCARNGAVH 

       310        320        330        340        350        360 
AFRDWIDGLA ARHPQLKRFY CYAEPEGGAA ADAVGLLSED LLAEWLPQER DVDAYFLGPK 

       370        380        390 
GFMAAVKRQL KGLGVPEQQS RYEFFGPAAA LE 

Q88PP0 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
 Hosted by au flag APAF Australia Mirror sites: Brazil  Canada  China  Korea  Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!