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UniProtKB/Swiss-Prot entry Q88CB1


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DADA2_PSEPK
Primary accession number Q88CB1
Secondary accession numbers None
Integrated into Swiss-Prot on January 16, 2004
Sequence was last modified on June 1, 2003 (Sequence version 1)
Annotations were last modified on    November 4, 2008 (Entry version 38)
Name and origin of the protein
Protein name D-amino acid dehydrogenase 2 small subunit
Synonym EC 1.4.99.1
Gene name
Name: dadA2
Synonyms: dadA-2
OrderedLocusNames: PP_5270
From
Pseudomonas putida (strain KT2440) [TaxID: 160488] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1046/j.1462-2920.2002.00366.x; PubMed=12534463 [NCBI, ExPASy, EBI, Israel, Japan]
Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H., Martins dos Santos V.A.P., Fouts D.E., Gill S.R., Pop M., Holmes M., Brinkac L.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Kolonay J.F., Madupu R., Nelson W.C., White O., Peterson J.D., Khouri H.M., Hance I., Chris Lee P., Holtzapple E.K., Scanlan D., Tran K., Moazzez A., Utterback T.R., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N., Duesterhoeft A., Tuemmler B., Fraser C.M.;
"Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.";
Environ. Microbiol. 4:799-808(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE015451; AAN70835.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_747371.1; -.
3D structure databases
ModBase Q88CB1.
Enzyme and pathway databases
BioCyc PPUT160488:PP_5270-MON; -.
Ontologies
GO
GO:0008718; Molecular function: D-amino-acid dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0006524; Biological process: alanine catabolic process (inferred from electronic annotation from HAMAP).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
HAMAP MF_01202; -; 1.
PBIL [Tree]
InterPro IPR006076; FAD-dep_OxRdtase.
IPR002197; HTH_Fis.
Graphical view of domain structure.
Pfam PF01266; DAO; 1.
Pfam graphical view of domain structure.
PRINTS PR01590; HTHFIS.
ProDom PD000139; FAD_pyr_redox; 1.
[Domain structure / List of seq. sharing at least 1 domain]
BLOCKS Q88CB1.
ProtoNet Q88CB1.
Genome annotation databases
GeneID 1042325; -.
GenomeReviews AE015451_GR; PP_5270.
KEGG ppu:PP_5270; -.
NMPDR fig|160488.1.peg.5201; -.
TIGR PP_5270; -.
Phylogenomic databases
HOGENOM Q88CB1; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; FAD; Flavoprotein; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   434  434     D-amino acid dehydrogenase 2 small subunit. PRO_0000166141
NP_BIND   3    17  15     FAD (Potential). 
Sequence information
Length: 434 AA [This is the length of the unprocessed precursor] Molecular weight: 47399 Da [This is the MW of the unprocessed precursor] CRC64: 1A05E3D265711D44 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MRVLVLGSGV IGTASAYYLA RQGFEVTVVD RQPAVAMETS FANAGQISPG YASPWAAPGV 

        70         80         90        100        110        120 
PLKAIKWLLE RHAPLAIKLT GDVDQYLWMA QMLRNCTASR YAVNKERMVR LSEYSRDCLD 

       130        140        150        160        170        180 
ELRAETGINY ENRSLGTTQL FRTQAQVDAA AKDIAVLEQS GVPYELLDRD GIARVEPALA 

       190        200        210        220        230        240 
GVKDILAGAL RLPNDQTGDC QLFTTKLADM ALKLGVEFRF GQDIQRLDFA GDRINGVWID 

       250        260        270        280        290        300 
GKLETADRYV LALGSYSPQM LKPLGIKAPV YPLKGYSLTV PITNSDMAPT STILDETYKV 

       310        320        330        340        350        360 
AITRFDNRIR VGGMAEIAGF DLSLNPRRRE TLEMIVNDLY PRGGDLSQAS FWTGLRPATP 

       370        380        390        400        410        420 
DGTPIVGATA FRNLFLNTGH GTLGWTMACG SGRLLADLIA RKKPQISAEG LDISRYGNSR 

       430 
EVAKHGQSAP AHQQ 

Q88CB1 in FASTA format

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