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UniProtKB/Swiss-Prot entry Q88BB6


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DADA_PSESM
Primary accession number Q88BB6
Secondary accession numbers None
Integrated into Swiss-Prot on January 16, 2004
Sequence was last modified on June 1, 2003 (Sequence version 1)
Annotations were last modified on    November 4, 2008 (Entry version 32)
Name and origin of the protein
Protein name D-amino acid dehydrogenase small subunit
Synonym EC 1.4.99.1
Gene name
Name: dadA
OrderedLocusNames: PSPTO_0101
From
Pseudomonas syringae pv. tomato [TaxID: 323] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=DC3000;
DOI=10.1073/pnas.1731982100; PubMed=12928499 [NCBI, ExPASy, EBI, Israel, Japan]
Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T., Gwinn M.L., Dodson R.J., DeBoy R.T., Durkin A.S., Kolonay J.F., Madupu R., Daugherty S.C., Brinkac L.M., Beanan M.J., Haft D.H., Nelson W.C., Davidsen T.M., Zafar N., Zhou L., Liu J., Yuan Q., Khouri H.M., Fedorova N.B., Tran B., Russell D., Berry K.J., Utterback T.R., Van Aken S.E., Feldblyum T.V., D'Ascenzo M., Deng W.-L., Ramos A.R., Alfano J.R., Cartinhour S., Chatterjee A.K., Delaney T.P., Lazarowitz S.G., Martin G.B., Schneider D.J., Tang X., Bender C.L., White O., Fraser C.M., Collmer A.;
"The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000.";
Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE016853; AAO53655.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_789960.1; -.
3D structure databases
ModBase Q88BB6.
Enzyme and pathway databases
BioCyc PSYR223283:PSPTO_0101-MON; -.
Ontologies
GO
GO:0008718; Molecular function: D-amino-acid dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0006524; Biological process: alanine catabolic process (inferred from electronic annotation from HAMAP).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
HAMAP MF_01202; -; 1.
PBIL [Tree]
InterPro IPR006076; FAD-dep_OxRdtase.
Graphical view of domain structure.
Pfam PF01266; DAO; 1.
Pfam graphical view of domain structure.
ProDom PD000139; FAD_pyr_redox; 1.
[Domain structure / List of seq. sharing at least 1 domain]
BLOCKS Q88BB6.
ProtoNet Q88BB6.
Genome annotation databases
GeneID 1181709; -.
GenomeReviews AE016853_GR; PSPTO_0101.
KEGG pst:PSPTO_0101; -.
NMPDR fig|223283.1.peg.98; -.
TIGR PSPTO_0101; -.
Phylogenomic databases
HOGENOM Q88BB6; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; FAD; Flavoprotein; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   433  433     D-amino acid dehydrogenase small subunit. PRO_0000166142
NP_BIND   3    17  15     FAD (Potential). 
Sequence information
Length: 433 AA [This is the length of the unprocessed precursor] Molecular weight: 46928 Da [This is the MW of the unprocessed precursor] CRC64: 16581168E6DB0D87 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MRVLVLGSGV IGTTSAYYLA RAGFQVTVVD RQPAVGMETS FANAGQVSPG YASPWAAPGV 

        70         80         90        100        110        120 
PLKAIKWLLQ RHSPLAIKAT ADIDQYLWMA QMLRNCTANR YAVNKERMVR LSEYSRDCLD 

       130        140        150        160        170        180 
ELRIETGIAY EGRSLGTTQL FRTQAQLDNA AKDIAVLEQS GVPYELLDRA GIARVEPALA 

       190        200        210        220        230        240 
GVTGILSGAL RLPNDQTGDC QLFTTRLAQM AVELGVEFRY GQNIERLEHA GDTVSGVWID 

       250        260        270        280        290        300 
GVLETADRYV LALGSYSPQL LKPLGIKAPV YPLKGYSLTV PISNPAMAPT STILDETYKV 

       310        320        330        340        350        360 
AITRFDNRIR VGGMAEIAGF DLSLNPRRRE TLEMIVGDLY PQGGDLSQAS FWTGLRPTTP 

       370        380        390        400        410        420 
DGTPIVGATP LRNLFLNTGH GTLGWTMACG SGRLLADLIA RKRPQISAAG LDISRYGNPQ 

       430 
ENAQHVNPAP AHQ 

Q88BB6 in FASTA format

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