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UniProtKB/TrEMBL entry Q7ZV09

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name Q7ZV09_DANRE
Primary accession number Q7ZV09
Secondary accession numbers None
Integrated into TrEMBL on June 1, 2003
Sequence was last modified on June 1, 2003 (Sequence version 1)
Annotations were last modified on    March 3, 2009 (Entry version 41)
Name and origin of the protein
Protein name RAD54-like (S. cerevisiae)
Synonyms None
Gene name
Name: rad54l
From
Danio rerio (Zebrafish) (Brachydanio rerio) [TaxID: 7955] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio.
Protein existence 1: Evidence at protein level;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Whole body;
NIH - Zebrafish Gene Collection (ZGC) project;
Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BC046050; AAH46050.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00507004; -.
RefSeq NP_957438.1; -.
UniGene Dr.78565
3D structure databases
PDB
1Z3I; X-ray; 3.00 A; X=92-735.[ExPASy / RCSB / EBI]
PDBsum 1Z3I; -.
ModBase Q7ZV09.
Organism-specific databases
ZFIN ZDB-GENE-040426-968; rad54l.
Gene expression databases
ArrayExpress Q7ZV09; -.
Bgee Q7ZV09; -.
Ontologies
GO
GO:0005524; Molecular function: ATP binding (inferred from electronic annotation from InterPro).
GO:0003677; Molecular function: DNA binding (inferred from electronic annotation from InterPro).
GO:0008094; Molecular function: DNA-dependent ATPase activity (inferred from direct assay from ZFIN).
GO:0004386; Molecular function: helicase activity (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR014001; DEAD-like_N.
IPR001650; DNA/RNA_helicase_C.
IPR014021; Helicase_SF1/SF2_ATP-bd.
IPR000330; SNF2_N.
Graphical view of domain structure.
Pfam PF00271; Helicase_C; 1.
PF00176; SNF2_N; 1.
Pfam graphical view of domain structure.
SMART SM00487; DEXDc; 1.
SM00490; HELICc; 1.
SMART graphical view of domain structure.
PROSITE PS51192; HELICASE_ATP_BIND_1; 1.
PS51194; HELICASE_CTER; 1.
PROSITE graphical view of domain structure (profiles).
Genome annotation databases
Ensembl ENSDARG00000018623; Danio rerio. [Contig view]
GeneID 394119; -.
KEGG dre:394119; -.
Phylogenomic databases
HOGENOM Q7ZV09; -.
HOVERGEN Q7ZV09; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
None
Features
None
Sequence information
Length: 738 AA Molecular weight: 83645 Da CRC64: 73A44EEDA070301E [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MRRSLAPSQV AKRKQGPDSD DEEDWEPDME PQSKRDCREK YISPYRKPLT PLTNRPVCAD 

        70         80         90        100        110        120 
GNEHEAFIRK ILSKPFKIPI PNYTGVLGLR ALGLRRAGVR KALHDPFEDG ALVLYEPPAI 

       130        140        150        160        170        180 
SAHDLIKADK EKLPVHVVVD PVLSKVLRPH QREGVKFLWD CVTGRRIENS YGCIMADEMG 

       190        200        210        220        230        240 
LGKTLQCITL IWTLLKQSPD CKPEIDKVIV VSPSSLVRNW YNEVGKWLGG RVQPVAIDGG 

       250        260        270        280        290        300 
SKDEIDSKLV NFISQQGMRI PTPILIISYE TFRLHAEVLH KGKVGLVICD EGHRLKNSDN 

       310        320        330        340        350        360 
QTYLALNSMN AQRRVLISGT PIQNDLLEYF SLVHFVNSGI LGTAQEFKKR FEIPILKGRD 

       370        380        390        400        410        420 
ADASDKDRAA GEQKLQELIS IVNRCLIRRT SDILSKYLPV KIEQVVCCNL TPLQKELYKL 

       430        440        450        460        470        480 
FLKQAKPVES LQTGKISVSS LSSITSLKKL CNHPALIYEK CLTGEEGFDG ALDLFPQNYS 

       490        500        510        520        530        540 
TKAVEPQLSG KMLVLDYILA MTRTTTSDKV VLVSNYTQTL DLFEKLCRNR RYLYVRLDGT 

       550        560        570        580        590        600 
MSIKKRAKIV ERFNNPSSPE FIFMLSSKAG GCGLNLIGAN RLVMFDPDWN PANDEQAMAR 

       610        620        630        640        650        660 
VWRDGQKKTC YIYRLLSTGT IEEKILQRQA HKKALSSCVV DEEQDVERHF SLGELRELFS 

       670        680        690        700        710        720 
LNEKTLSDTH DRFRCRRCVN GRQVRPPPDD SDCTCDLSNW HHCADKRGLR DPVLQASWDA 

       730 
AVSFVFHQRS HEDQRGVV
Q7ZV09 in FASTA format

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