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UniProtKB/Swiss-Prot entry Q68XS0

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DHSB_RICTY
Primary accession number Q68XS0
Secondary accession numbers None
Integrated into Swiss-Prot on March 20, 2007
Sequence was last modified on October 11, 2004 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 33)
Name and origin of the protein
Protein name Succinate dehydrogenase iron-sulfur subunit
Synonym EC 1.3.99.1
Gene name
Name: sdhB
OrderedLocusNames: RT0086
From
Rickettsia typhi [TaxID: 785] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; typhus group.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC VR-144 / Wilmington;
DOI=10.1128/JB.186.17.5842-5855.2004; PubMed=15317790 [NCBI, ExPASy, EBI, Israel, Japan]
McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A., Hong C., Yu X.-J., Walker D.H., Weinstock G.M.;
"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae.";
J. Bacteriol. 186:5842-5855(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE017197; AAU03572.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_067054.1; -.
3D structure databases
ModBase Q68XS0.
Enzyme and pathway databases
BioCyc RTYP257363:RT0086-MON; -.
Family and domain databases
InterPro IPR006058; 2Fe2S_fd_BS.
IPR001450; 4Fe4S_Fe_S_bd.
IPR012675; b-grasp_ferredoxin-like.
IPR001041; Ferredoxin.
IPR012285; Fum_reductase_C.
IPR004489; Succ_DHase/fum_Rdtase_Fe-S.
Graphical view of domain structure.
Gene3D G3DSA:3.10.20.30; Ferredoxin_fold; 1.
G3DSA:1.10.1060.10; Fum_reductase_C; 1.
Pfam PF00111; Fer2; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR00384; dhsB; 1.
PROSITE PS00197; 2FE2S_FER_1; 1.
PS51085; 2FE2S_FER_2; 1.
PS00198; 4FE4S_FER_1; 1.
PS51379; 4FE4S_FER_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q68XS0.
Genome annotation databases
GeneID 2959191; -.
GenomeReviews AE017197_GR; RT0086.
KEGG rty:RT0086; -.
Phylogenomic databases
HOGENOM Q68XS0; -.
Genome annotation databases
CMR Q68XS0; RT0086.
Other
ProtoNet Q68XS0.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
2Fe-2S; 3Fe-4S; 4Fe-4S; Complete proteome; Electron transport; Iron; Iron-sulfur; Metal-binding; Oxidoreductase; Transport; Tricarboxylic acid cycle.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   261  261     Succinate dehydrogenase iron-sulfur subunit. PRO_0000280984
DOMAIN   28   119  92     2Fe-2S ferredoxin-type. 
DOMAIN   161   191  31     4Fe-4S ferredoxin-type. 
METAL   80    80        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   85    85        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   88    88        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   100   100        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   171   171        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   174   174        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   177   177        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   181   181        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   228   228        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   234   234        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   238   238        Iron-sulfur 2 (4Fe-4S) (By similarity). 
Sequence information
Length: 261 AA [This is the length of the unprocessed precursor] Molecular weight: 29601 Da [This is the MW of the unprocessed precursor] CRC64: F9CBCE4066008131 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MVELRLPSNS VVKKGRVHKA QQEMLKPRKV QVYRYDPDLN KNPTIDSFEI DLSKTGPMVL 

        70         80         90        100        110        120 
DALIKIKNEI DSTLTFRRSC REGICGSCAM NIDGTNTLAC IKPIEDISGD IKIYPLPHMK 

       130        140        150        160        170        180 
VVKDLVPDMS HFYTQYESIE PWLKNDNPAP SNSERLQSIQ DREKLDGLYE CILCACCSTS 

       190        200        210        220        230        240 
CPSYWWNSDK YLGPAILLQA YRWIADSRDD NTGARLEALE DPFKLYRCHT IMNCTKTCPK 

       250        260 
GLNPAKAIGR VKSLIAERHG V
Q68XS0 in FASTA format

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