ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry Q672H9


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name VP2_SVSAP
Primary accession number Q672H9
Secondary accession numbers None
Integrated into Swiss-Prot on July 1, 2008
Sequence was last modified on October 11, 2004 (Sequence version 1)
Annotations were last modified on    June 16, 2009 (Entry version 17)
Name and origin of the protein
Protein name Protein VP2
Synonym Minor capsid protein
Gene name
ORFNames: ORF3
From
Sapporo virus (isolate GI/Human/Germany/pJG-Sap01) (Hu/Dresden/pJG-Sap01/DE) [TaxID: 291175] 
Taxonomy Viruses; ssRNA positive-strand viruses, no DNA stage; Caliciviridae; Sapovirus.
Virus host Homo sapiens (Human) [TaxID: 9606]
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC RNA].
DOI=10.1128/JVI.01462-06; PubMed=17121797 [NCBI, ExPASy, EBI, Israel, Japan]
Fullerton S.W., Blaschke M., Coutard B., Gebhardt J., Gorbalenya A., Canard B., Tucker P.A., Rohayem J.;
"Structural and functional characterization of sapovirus RNA-dependent RNA polymerase.";
J. Virol. 81:1858-1871(2007).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AY694184; AAU09267.1; -; Genomic_RNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_077280.1; -.
3D structure databases
ModBase Q672H9.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from UniProtKB-KW).
GO:0030430; Cellular component: host cell cytoplasm (inferred from electronic annotation from UniProtKB-SubCell).
GO:0019012; Cellular component: virion (inferred from electronic annotation from UniProtKB-SubCell).
QuickGo view.
Family and domain databases
InterPro IPR008437; Minor_structural_calicivir.
Graphical view of domain structure.
Pfam PF05752; Calici_MSP; 1.
Pfam graphical view of domain structure.
Genome annotation databases
GeneID 5176813; -.
Other
ProtoNet Q672H9.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cytoplasm; Virion.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   165  165     Protein VP2. PRO_0000342119
Sequence information
Length: 165 AA [This is the length of the unprocessed precursor] Molecular weight: 17814 Da [This is the MW of the unprocessed precursor] CRC64: 7D6B7C5D4AB1DBC0 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSWLVGALQT FGSLADVAGT VSNIVYQQRQ AAQLEKQNEL METWMNKQEA LQKSQMELTR 

        70         80         90        100        110        120 
DLSINGPAAR VQSALDAGFD EVSARRIAGS GERVIWGNLD RPIMHAGTMD SIRQTRHLDS 

       130        140        150        160 
LSHSLATFKN GTPFGKPAPP TAKSGRPQAT TAQITIGHNP GSTSV 

Q672H9 in FASTA format

View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
 Hosted by ch flag SIB Switzerland Mirror sites: Australia  Brazil  Canada  China  Korea
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!