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UniProtKB/TrEMBL entry Q62GA0

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name Q62GA0_BURMA
Primary accession number Q62GA0
Secondary accession numbers None
Integrated into TrEMBL on October 25, 2004
Sequence was last modified on October 25, 2004 (Sequence version 1)
Annotations were last modified on    June 16, 2009 (Entry version 32)
Name and origin of the protein
Protein name Diaminopimelate decarboxylase
Synonym EC 4.1.1.20
Gene name
Name: lysA
OrderedLocusNames: BMA2756
From
Burkholderia mallei (Pseudomonas mallei) [TaxID: 13373] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 23344;
DOI=10.1073/pnas.0403306101; PubMed=15377793 [NCBI, ExPASy, EBI, Israel, Japan]
Nierman W.C., DeShazer D., Kim H.S., Tettelin H., Nelson K.E., Feldblyum T.V., Ulrich R.L., Ronning C.M., Brinkac L.M., Daugherty S.C., Davidsen T.D., DeBoy R.T., Dimitrov G., Dodson R.J., Durkin A.S., Gwinn M.L., Haft D.H., Khouri H.M., Kolonay J.F., Madupu R., Mohammoud Y., Nelson W.C., Radune D., Romero C.M., Sarria S., Selengut J., Shamblin C., Sullivan S.A., White O., Yu Y., Zafar N., Zhou L., Fraser C.M.;
"Structural flexibility in the Burkholderia mallei genome.";
Proc. Natl. Acad. Sci. U.S.A. 101:14246-14251(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000010; AAU47904.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_104274.1; -.
3D structure databases
ModBase Q62GA0.
Enzyme and pathway databases
BioCyc BMAL243160:BMA_2756-MON; -.
Ontologies
GO
GO:0008836; Molecular function: diaminopimelate decarboxylase activity (inferred from electronic annotation from InterPro).
GO:0009089; Biological process: lysine biosynthetic process via diaminopimelate (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR002986; DAP_decrbxlase.
IPR000183; De-COase2.
Graphical view of domain structure.
Pfam PF02784; Orn_Arg_deC_N; 1.
PF00278; Orn_DAP_Arg_deC; 1.
Pfam graphical view of domain structure.
PRINTS PR01181; DAPDCRBXLASE.
PR01179; ODADCRBXLASE.
TIGRFAMs TIGR01048; lysA; 1.
PROSITE PS00879; ODR_DC_2_2; 1.
Genome annotation databases
GeneID 3091324; -.
GenomeReviews CP000010_GR; BMA2756.
KEGG bma:BMA2756; -.
TIGR BMA2756; -.
Phylogenomic databases
HOGENOM Q62GA0; -.
OMA Q62GA0; AGKCCES.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Lyase.
Features
None
Sequence information
Length: 423 AA Molecular weight: 45221 Da CRC64: C8B498609408D298 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MTQAAFDYVD GTLHAERVST VELAERFGTP LFVYSRAALT AAYEAYAKAC AGRRASIHVA 

        70         80         90        100        110        120 
VKANSNLGVL NVFARLGAGF DIVSGGELAR VLAAGGRARD VVFSGVGKSA DEMRVALEAG 

       130        140        150        160        170        180 
VKCFNVESIP ELDRLNAVAA SLGKRAPVSL RVNPDVDPKT HPYISTGLKA NKFGIAFDDA 

       190        200        210        220        230        240 
RATYRAAAAL PNLEVVGIDC HIGSQITELS PYLDAIDKLL DLVERIEADG VQIHHVDVGG 

       250        260        270        280        290        300 
GLGITYDDET PPDIGAYVRA VLARIDARGH GQREIWFEPG RSLTGNAGIL LTRVEFLKQG 

       310        320        330        340        350        360 
EEKNFAIVDA AMNDLARPAM YQAFHAIVPV APRTDVAAAV YDIVGPVCES GDWLGRERSL 

       370        380        390        400        410        420 
AIAPGDLLAI RSAGAYGFTM SSNYNTRPRA AEVIVDGANA HLVRPRETVE SLFEHETILP 


EGR
Q62GA0 in FASTA format

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