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UniProtKB/Swiss-Prot entry Q5UQC9


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name UBC1_MIMIV
Primary accession number Q5UQC9
Secondary accession numbers None
Integrated into Swiss-Prot on September 13, 2005
Sequence was last modified on December 7, 2004 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 25)
Name and origin of the protein
Protein name Probable ubiquitin-conjugating enzyme E2 L460
Synonyms EC 6.3.2.19
Ubiquitin-protein ligase
Ubiquitin carrier protein
Gene name
Name: UBC
OrderedLocusNames: MIMI_L460
From
Acanthamoeba polyphaga mimivirus (APMV) [TaxID: 212035] 
Taxonomy Viruses; dsDNA viruses, no RNA stage; Mimivirus.
Virus host Acanthamoeba polyphaga (Amoeba) [TaxID: 5757]
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Rowbotham-Bradford;
DOI=10.1126/science.1101485; PubMed=15486256 [NCBI, ExPASy, EBI, Israel, Japan]
Raoult D., Audic S., Robert C., Abergel C., Renesto P., Ogata H., La Scola B., Susan M., Claverie J.-M.;
"The 1.2-megabase genome sequence of Mimivirus.";
Science 306:1344-1350(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AY653733; AAV50726.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_142814.1; -.
3D structure databases
ModBase Q5UQC9.
Ontologies
GO
GO:0004842; Molecular function: ubiquitin-protein ligase activity (inferred from electronic annotation from EC).
QuickGo view.
Family and domain databases
InterPro IPR016135; UBQ-conjugat/RWD-like.
IPR000608; UBQ-conjugat_E2.
Graphical view of domain structure.
Gene3D G3DSA:3.10.110.10; UBQ-conjugat_E2; 1.
PANTHER PTHR11621; UBQ-conjugat_E2; 1.
Pfam PF00179; UQ_con; 1.
Pfam graphical view of domain structure.
ProDom PD000461; UBQ_conjugat; 1.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00212; UBCc; 1.
SMART graphical view of domain structure.
PROSITE PS00183; UBIQUITIN_CONJUGAT_1; FALSE_NEG.
PS50127; UBIQUITIN_CONJUGAT_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q5UQC9.
Genome annotation databases
GeneID 3162996; -.
Other
ProtoNet Q5UQC9.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Ligase; Ubl conjugation pathway.
Features
SEVIEWER logo Feature table viewer
KeyFrom  To Length Description FTId
CHAIN   1   158  158     Probable ubiquitin-conjugating enzyme E2 L460. PRO_0000082593
ACT_SITE   91    91        Glycyl thioester intermediate (By similarity). 
Sequence information
Length: 158 AA [This is the length of the unprocessed precursor] Molecular weight: 18677 Da [This is the MW of the unprocessed precursor] CRC64: 9653F53C82DEB536 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MNSSNIRRIQ NEYNKINNDK NLYADSFQIN MVDENIFLWK VNIKGPENSL YENYNFELEI 

        70         80         90        100        110        120 
ELSNDYPYSS PKVKFITPIQ HMNVNDKGDI CLNILKKDGW NASLNIISII WSIIVLLDQP 

       130        140        150 
NPEDPFNSEL ASLYRNDKLS YDKKIRDYCK THSKLWTF 

Q5UQC9 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

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