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UniProtKB/Swiss-Prot entry Q5S007


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name LRRK2_HUMAN
Primary accession number Q5S007
Secondary accession numbers Q6ZS50 Q8NCX9
Integrated into Swiss-Prot on January 24, 2006
Sequence was last modified on December 21, 2004 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 41)
Name and origin of the protein
Protein name Leucine-rich repeat serine/threonine-protein kinase 2
Synonyms EC 2.7.11.1
Dardarin
Gene name
Name: LRRK2
Synonyms: PARK8
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, AND VARIANTS PARK8 VAL-1122; CYS-1441; CYS-1699 AND THR-2020.
TISSUE=Brain;
DOI=10.1016/j.neuron.2004.11.005; PubMed=15541309 [NCBI, ExPASy, EBI, Israel, Japan]
Zimprich A., Biskup S., Leitner P., Lichtner P., Farrer M., Lincoln S.J., Kachergus J.M., Hulihan M.M., Uitti R.J., Calne D.B., Stoessl A.J., Pfeiffer R.F., Patenge N., Carballo Carbajal I., Vieregge P., Asmus F., Mueller-Myhsok B., Dickson D.W., Meitinger T., Strom T.M., Wszolek Z.K., Gasser T.;
"Mutations in a large multifunctional protein (LRRK2) cause autosomal dominant parkinsonism with pleiomorphic a-synuclein and tau-pathology (PARK8).";
Neuron 44:601-607(2004).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 402-1271.
DOI=10.1038/ng1285; PubMed=14702039 [NCBI, ExPASy, EBI, Israel, Japan]
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S., Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.;
"Complete sequencing and characterization of 21,243 full-length human cDNAs.";
Nat. Genet. 36:40-45(2004).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 2128-2527.
TISSUE=Testis;
The German cDNA consortium;
Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
[4]
DISEASE.
DOI=10.1093/brain/awh607; PubMed=16081470 [NCBI, ExPASy, EBI, Israel, Japan]
Adams J.R., van Netten H., Schulzer M., Mak E., McKenzie J., Strongosky A., Sossi V., Ruth T.J., Lee C.S., Farrer M., Gasser T., Uitti R.J., Calne D.B., Wszolek Z.K., Stoessl A.J.;
"PET in LRRK2 mutations: comparison to sporadic Parkinson's disease and evidence for presymptomatic compensation.";
Brain 128:2777-2785(2005).
[5]
SUBCELLULAR LOCATION, AND CHARACTERIZATION OF VARIANT PARK8 THR-2020.
DOI=10.1093/hmg/ddi439; PubMed=16321986 [NCBI, ExPASy, EBI, Israel, Japan]
Gloeckner C.J., Kinkl N., Schumacher A., Braun R.J., O'Neill E., Meitinger T., Kolch W., Prokisch H., Ueffing M.;
"The Parkinson disease causing LRRK2 mutation I2020T is associated with increased kinase activity.";
Hum. Mol. Genet. 15:223-232(2006).
[6]
DISEASE.
DOI=10.1016/j.mad.2005.06.010; PubMed=16087219 [NCBI, ExPASy, EBI, Israel, Japan]
Toft M., Sando S.B., Melquist S., Ross O.A., White L.R., Aasly J.O., Farrer M.J.;
"LRRK2 mutations are not common in Alzheimer's disease.";
Mech. Ageing Dev. 126:1201-1205(2005).
[7]
SUBCELLULAR LOCATION, AND CHARACTERIZATION OF VARIANTS PD CYS-1441 AND SER-2019.
DOI=10.1073/pnas.0507360102; PubMed=16269541 [NCBI, ExPASy, EBI, Israel, Japan]
West A.B., Moore D.J., Biskup S., Bugayenko A., Smith W.W., Ross C.A., Dawson V.L., Dawson T.M.;
"Parkinson's disease-associated mutations in leucine-rich repeat kinase 2 augment kinase activity.";
Proc. Natl. Acad. Sci. U.S.A. 102:16842-16847(2005).
[8]
SUBCELLULAR LOCATION, INTERACTION WITH PARK2, AND POSSIBLE FUNCTION.
DOI=10.1073/pnas.0508052102; PubMed=16352719 [NCBI, ExPASy, EBI, Israel, Japan]
Smith W.W., Pei Z., Jiang H., Moore D.J., Liang Y., West A.B., Dawson V.L., Dawson T.M., Ross C.A.;
"Leucine-rich repeat kinase 2 (LRRK2) interacts with parkin and mutant LRRK2 induces neuronal degeneration.";
Proc. Natl. Acad. Sci. U.S.A. 102:18676-18681(2005).
[9]
TISSUE SPECIFICITY.
DOI=10.1002/ana.20808; PubMed=16532471 [NCBI, ExPASy, EBI, Israel, Japan]
Galter D., Westerlund M., Carmine A., Lindqvist E., Sydow O., Olson L.;
"LRRK2 expression linked to dopamine-innervated areas.";
Ann. Neurol. 59:714-719(2006).
[10]
VARIANTS PARK8 GLY-1441 AND CYS-1699, AND TISSUE SPECIFICITY.
DOI=10.1016/j.neuron.2004.10.023; PubMed=15541308 [NCBI, ExPASy, EBI, Israel, Japan]
Paisan-Ruiz C., Jain S., Evans E.W., Gilks W.P., Simon J., van der Brug M., Lopez de Munain A., Aparicio S., Gil A.M., Khan N.L., Johnson J., Martinez J.R., Nicholl D., Carrera I.M., Pena A.S., de Silva R., Lees A.J., Marti-Masso J.F., Perez-Tur J., Wood N.W., Singleton A.B.;
"Cloning of the gene containing mutations that cause PARK8-linked Parkinson's disease.";
Neuron 44:595-600(2004).
[11]
VARIANT PARK8/PD SER-2019.
DOI=10.1086/429256; PubMed=15726496 [NCBI, ExPASy, EBI, Israel, Japan]
Kachergus J.M., Mata I.F., Hulihan M., Taylor J.P., Lincoln S., Aasly J.O., Gibson J.M., Ross O.A., Lynch T., Wiley J., Payami H., Nutt J., Maraganore D.M., Czyzewski K., Styczynska M., Wszolek Z.K., Farrer M.J., Toft M.;
"Identification of a novel LRRK2 mutation linked to autosomal dominant parkinsonism: evidence of a common founder across European populations.";
Am. J. Hum. Genet. 76:672-680(2005).
[12]
VARIANT PARK8 SER-2019.
DOI=10.1002/ana.20401; PubMed=15732108 [NCBI, ExPASy, EBI, Israel, Japan]
Hernandez D.G., Paisan-Ruiz C., McInerney-Leo A., Jain S., Meyer-Lindenberg A., Evans E.W., Berman K.F., Johnson J., Auburger G., Schaeffer A.A., Lopez G.J., Nussbaum R.L., Singleton A.B.;
"Clinical and positron emission tomography of Parkinson's disease caused by LRRK2.";
Ann. Neurol. 57:453-456(2005).
[13]
VARIANT PARK8/PD SER-2019.
DOI=10.1002/ana.20456; PubMed=15852371 [NCBI, ExPASy, EBI, Israel, Japan]
Aasly J.O., Toft M., Fernandez-Mata I., Kachergus J.M., Hulihan M., White L.R., Farrer M.J.;
"Clinical features of LRRK2-associated Parkinson's disease in central Norway.";
Ann. Neurol. 57:762-765(2005).
[14]
VARIANT PARK8 SER-2019.
DOI=10.1002/ana.20636; PubMed=16240353 [NCBI, ExPASy, EBI, Israel, Japan]
French Parkinson's disease genetics study group;
Lesage S., Ibanez P., Lohmann E., Pollak P., Tison F., Tazir M., Leutenegger A.-L., Guimaraes J., Bonnet A.-M., Agid Y., Duerr A., Brice A.;
"G2019S LRRK2 mutation in French and North African families with Parkinson's disease.";
Ann. Neurol. 58:784-787(2005).
[15]
VARIANT PARK8 THR-2020.
DOI=10.1002/ana.20484; PubMed=15880653 [NCBI, ExPASy, EBI, Israel, Japan]
Funayama M., Hasegawa K., Ohta E., Kawashima N., Komiyama M., Kowa H., Tsuji S., Obata F.;
"An LRRK2 mutation as a cause for the parkinsonism in the original PARK8 family.";
Ann. Neurol. 57:918-921(2005).
[16]
VARIANT PD SER-2019.
DOI=10.1002/ana.20510; PubMed=15929036 [NCBI, ExPASy, EBI, Israel, Japan]
Deng H., Le W., Guo Y., Hunter C.B., Xie W., Jankovic J.;
"Genetic and clinical identification of Parkinson's disease patients with LRRK2 G2019S mutation.";
Ann. Neurol. 57:933-934(2005).
[17]
VARIANTS PARK8 MET-793; ARG-930; CYS-1096 THR-1228; SER-2019 AND THR-2020, AND VARIANT LYS-551.
DOI=10.1093/brain/awh666; PubMed=16251215 [NCBI, ExPASy, EBI, Israel, Japan]
Berg D., Schweitzer K., Leitner P., Zimprich A., Lichtner P., Belcredi P., Bruessel T., Schulte C., Maass S., Naegele T.;
"Type and frequency of mutations in the LRRK2 gene in familial and sporadic Parkinson's disease.";
Brain 128:3000-3011(2005).
[18]
VARIANTS PARK8 CYS-1699; HIS-1941; SER-2019 AND ILE-2356.
DOI=10.1093/brain/awh667; PubMed=16272164 [NCBI, ExPASy, EBI, Israel, Japan]
Khan N.L., Jain S., Lynch J.M., Pavese N., Abou-Sleiman P.M., Holton J.L., Healy D.G., Gilks W.P., Sweeney M.G., Ganguly M., Gibbons V., Gandhi S., Vaughan J., Eunson L.H., Katzenschlager R., Gayton J., Lennox G., Revesz T., Nicholl D., Bhatia K.P., Quinn N., Brooks D., Lees A.J., Davis M.B., Piccini P., Singleton A.B., Wood N.W.;
"Mutations in the gene LRRK2 encoding dardarin (PARK8) cause familial Parkinson's disease: clinical, pathological, olfactory and functional imaging and genetic data.";
Brain 128:2786-2796(2005).
[19]
VARIANTS PD VAL-1371; CYS-1441 AND SER-2019.
DOI=10.1038/sj.ejhg.5201539; PubMed=16333314 [NCBI, ExPASy, EBI, Israel, Japan]
Di Fonzo A., Tassorelli C., De Mari M., Chien H.F., Ferreira J., Rohe C.F., Riboldazzi G., Antonini A., Albani G., Mauro A., Marconi R., Abbruzzese G., Lopiano L., Fincati E., Guidi M., Marini P., Stocchi F., Onofrj M., Toni V., Tinazzi M., Fabbrini G., Lamberti P., Vanacore N., Meco G., Leitner P., Uitti R.J., Wszolek Z.K., Gasser T., Simons E.J., Breedveld G.J., Goldwurm S., Pezzoli G., Sampaio C., Barbosa E., Martignoni E., Oostra B.A., Bonifati V.;
"Comprehensive analysis of the LRRK2 gene in sixty families with Parkinson's disease.";
Eur. J. Hum. Genet. 14:322-331(2006).
[20]
VARIANT PARK8 SER-2019.
DOI=10.1136/jmg.2005.035568; PubMed=16272257 [NCBI, ExPASy, EBI, Israel, Japan]
Goldwurm S., Di Fonzo A., Simons E.J., Rohe C.F., Zini M., Canesi M., Tesei S., Zecchinelli A., Antonini A., Mariani C., Meucci N., Sacilotto G., Sironi F., Salani G., Ferreira J., Chien H.F., Fabrizio E., Vanacore N., Dalla Libera A., Stocchi F., Diroma C., Lamberti P., Sampaio C., Meco G., Barbosa E., Bertoli-Avella A.M., Breedveld G.J., Oostra B.A., Pezzoli G., Bonifati V.;
"The G6055A (G2019S) mutation in LRRK2 is frequent in both early and late onset Parkinson's disease and originates from a common ancestor.";
J. Med. Genet. 42:E65-E65(2005).
[21]
VARIANT PD SER-2019.
DOI=10.1016/S0140-6736(05)17828-3; PubMed=15680455 [NCBI, ExPASy, EBI, Israel, Japan]
The Parkinson study group-PROGENI investigators;
Nichols W.C., Pankratz N., Hernandez D., Paisan-Ruiz C., Jain S., Halter C.A., Michaels V.E., Reed T., Rudolph A., Shults C.W., Singleton A., Foroud T.;
"Genetic screening for a single common LRRK2 mutation in familial Parkinson's disease.";
Lancet 365:410-412(2005).
[22]
VARIANT PARK8 SER-2019.
DOI=10.1016/S0140-6736(05)17829-5; PubMed=15680456 [NCBI, ExPASy, EBI, Israel, Japan]
The Italian Parkinson genetics network;
Di Fonzo A., Rohe C.F., Ferreira J., Chien H.F., Vacca L., Stocchi F., Guedes L., Fabrizio E., Manfredi M., Vanacore N., Goldwurm S., Breedveld G.J., Sampaio C., Meco G., Barbosa E., Oostra B.A., Bonifati V.;
"A frequent LRRK2 gene mutation associated with autosomal dominant Parkinson's disease.";
Lancet 365:412-415(2005).
[23]
VARIANT PD SER-2019.
DOI=10.1016/S0140-6736(05)17830-1; PubMed=15680457 [NCBI, ExPASy, EBI, Israel, Japan]
Gilks W.P., Abou-Sleiman P.M., Gandhi S., Jain S., Singleton A., Lees A.J., Shaw K., Bhatia K.P., Bonifati V., Quinn N.P., Lynch J.M., Healy D.G., Holton J.L., Revesz T., Wood N.W.;
"A common LRRK2 mutation in idiopathic Parkinson's disease.";
Lancet 365:415-416(2005).
[24]
VARIANT PD SER-2019.
DOI=10.1016/S0140-6736(05)74809-1; PubMed=15811454 [NCBI, ExPASy, EBI, Israel, Japan]
Toft M., Mata I.F., Kachergus J.M., Ross O.A., Farrer M.J.;
"LRRK2 mutations and Parkinsonism.";
Lancet 365:1229-1230(2005).
[25]
VARIANT SER-2019.
DOI=10.1002/mds.20618; PubMed=16001413 [NCBI, ExPASy, EBI, Israel, Japan]
Kay D.M., Kramer P., Higgins D.S., Zabetian C.P., Payami H.;
"Escaping Parkinson's disease: a neurologically healthy octogenarian with the LRRK2 G2019S mutation.";
Mov. Disord. 20:1077-1078(2005).
[26]
VARIANT PD SER-2019.
DOI=10.1002/mds.20751; PubMed=16250030 [NCBI, ExPASy, EBI, Israel, Japan]
Kay D.M., Zabetian C.P., Factor S.A., Nutt J.G., Samii A., Griffith A., Bird T.D., Kramer P., Higgins D.S., Payami H.;
"Parkinson's disease and LRRK2: frequency of a common mutation in U.S. movement disorder clinics.";
Mov. Disord. 21:519-523(2006).
[27]
VARIANTS PARK8 CYS-1441; GLY-1441; HIS-1441; GLN-1514; SER-1542; GLU-1598; CYS-1699; THR-1869; THR-2012; SER-2019; THR-2020 AND ARG-2385, AND VARIANTS PRO-119; LYS-551; VAL-723; MET-793; VAL-1122; ALA-1262; HIS-1398; PRO-1628; THR-1646; THR-1647; ASP-2081; LEU-2119; ILE-2261 AND THR-2397.
DOI=10.1007/s10048-005-0005-1; PubMed=16172858 [NCBI, ExPASy, EBI, Israel, Japan]
Mata I.F., Kachergus J.M., Taylor J.P., Lincoln S., Aasly J., Lynch T., Hulihan M.M., Cobb S.A., Wu R.-M., Lu C.-S., Lahoz C., Wszolek Z.K., Farrer M.J.;
"Lrrk2 pathogenic substitutions in Parkinson's disease.";
Neurogenetics 6:171-177(2005).
[28]
VARIANTS PARK8 VAL-1371 AND SER-2019, AND VARIANTS HIS-1398 AND THR-2397.
DOI=10.1212/01.WNL.0000167552.79769.b3; PubMed=16157901 [NCBI, ExPASy, EBI, Israel, Japan]
Paisan-Ruiz C., Lang A.E., Kawarai T., Sato C., Salehi-Rad S., Fisman G.K., Al-Khairallah T., St George-Hyslop P.H., Singleton A., Rogaeva E.;
"LRRK2 gene in Parkinson disease: mutation analysis and case control association study.";
Neurology 65:696-700(2005).
[29]
VARIANT PD GLN-1067.
DOI=10.1212/01.wnl.0000180517.70572.37; PubMed=16247070 [NCBI, ExPASy, EBI, Israel, Japan]
Skipper L., Shen H., Chua E., Bonnard C., Kolatkar P., Tan L.C.S., Jamora R.D., Puvan K., Puong K.Y., Zhao Y., Pavanni R., Wong M.C., Yuen Y., Farrer M., Liu J.J., Tan E.K.;
"Analysis of LRRK2 functional domains in nondominant Parkinson disease.";
Neurology 65:1319-1321(2005).
[30]
VARIANTS PD MET-793; THR-1869 AND SER-2019.
DOI=10.1212/01.WNL.0000169023.51764.b0; PubMed=16157908 [NCBI, ExPASy, EBI, Israel, Japan]
Farrer M., Stone J., Mata I.F., Lincoln S., Kachergus J., Hulihan M., Strain K.J., Maraganore D.M.;
"LRRK2 mutations in Parkinson disease.";
Neurology 65:738-740(2005).
[31]
VARIANTS PD CYS-1441; HIS-1441 AND SER-2019.
DOI=10.1212/01.WNL.0000172630.22804.73; PubMed=16157909 [NCBI, ExPASy, EBI, Israel, Japan]
Zabetian C.P., Samii A., Mosley A.D., Roberts J.W., Leis B.C., Yearout D., Raskind W.H., Griffith A.;
"A clinic-based study of the LRRK2 gene in Parkinson disease yields new mutations.";
Neurology 65:741-744(2005).
[32]
VARIANT PD GLY-1441.
DOI=10.1016/j.neulet.2005.03.033; PubMed=15925109 [NCBI, ExPASy, EBI, Israel, Japan]
Mata I.F., Taylor J.P., Kachergus J., Hulihan M., Huerta C., Lahoz C., Blazquez M., Guisasola L.M., Salvador C., Ribacoba R., Martinez C., Farrer M., Alvarez V.;
"LRRK2 R1441G in Spanish patients with Parkinson's disease.";
Neurosci. Lett. 382:309-311(2005).
[33]
VARIANT PARK8/PD SER-2019.
DOI=10.1016/j.neulet.2005.10.083; PubMed=16298482 [NCBI, ExPASy, EBI, Israel, Japan]
Infante J., Rodriguez E., Combarros O., Mateo I., Fontalba A., Pascual J., Oterino A., Polo J.M., Leno C., Berciano J.;
"LRRK2 G2019S is a common mutation in Spanish patients with late-onset Parkinson's disease.";
Neurosci. Lett. 395:224-226(2006).
[34]
VARIANT PD SER-2019.
DOI=10.1016/j.parkreldis.2005.05.004; PubMed=16102999 [NCBI, ExPASy, EBI, Israel, Japan]
Gosal D., Ross O.A., Wiley J., Irvine G.B., Johnston J.A., Toft M., Mata I.F., Kachergus J., Hulihan M., Taylor J.P., Lincoln S.J., Farrer M.J., Lynch T., Mark Gibson J.;
"Clinical traits of LRRK2-associated Parkinson's disease in Ireland: a link between familial and idiopathic PD.";
Parkinsonism Relat. Disord. 11:349-352(2005).
[35]
VARIANTS PD CYS-1441; GLY-1441 AND SER-2019.
DOI=10.1001/archneur.63.3.377; PubMed=16533964 [NCBI, ExPASy, EBI, Israel, Japan]
Gaig C., Ezquerra M., Marti M.J., Munoz E., Valldeoriola F., Tolosa E.;
"LRRK2 mutations in Spanish patients with Parkinson disease: frequency, clinical features, and incomplete penetrance.";
Arch. Neurol. 63:377-382(2006).
[36]
VARIANTS [LARGE SCALE ANALYSIS] PRO-119; VAL-419; LYS-551; VAL-723; HIS-1398; GLN-1514; SER-1542; GLN-1550 AND PRO-1723.
DOI=10.1038/nature05610; PubMed=17344846 [NCBI, ExPASy, EBI, Israel, Japan]
Greenman C., Stephens P., Smith R., Dalgliesh G.L., Hunter C., Bignell G., Davies H., Teague J., Butler A., Stevens C., Edkins S., O'Meara S., Vastrik I., Schmidt E.E., Avis T., Barthorpe S., Bhamra G., Buck G., Choudhury B., Clements J., Cole J., Dicks E., Forbes S., Gray K., Halliday K., Harrison R., Hills K., Hinton J., Jenkinson A., Jones D., Menzies A., Mironenko T., Perry J., Raine K., Richardson D., Shepherd R., Small A., Tofts C., Varian J., Webb T., West S., Widaa S., Yates A., Cahill D.P., Louis D.N., Goldstraw P., Nicholson A.G., Brasseur F., Looijenga L., Weber B.L., Chiew Y.-E., DeFazio A., Greaves M.F., Green A.R., Campbell P., Birney E., Easton D.F., Chenevix-Trench G., Tan M.-H., Khoo S.K., Teh B.T., Yuen S.T., Leung S.Y., Wooster R., Futreal P.A., Stratton M.R.;
"Patterns of somatic mutation in human cancer genomes.";
Nature 446:153-158(2007).
Comments
  • FUNCTION: Probable protein kinase whose role is not yet known. May play a role in the phosphorylation of proteins central to Parkinson disease. May also have GTPase activity.
  • CATALYTIC ACTIVITY: ATP + a protein = ADP + a phosphoprotein.
  • SUBUNIT: Interacts with PARK2.
  • SUBCELLULAR LOCATION: Cytoplasm. Membrane; Peripheral membrane protein. Note=Localized in the cytoplasm and associated with cellular membrane structures. Associates with the mitochondrial outer membrane.
  • TISSUE SPECIFICITY: Expressed throughout the adult brain, but at a lower level than in heart and liver. Also expressed in placenta, lung, skeletal muscle, kidney and pancreas. In the brain, expressed in the cerebellum, cerebral cortex, medulla, spinal cord occipital pole, frontal lobe, temporal lobe and putamen. Expression is particularly high in brain dopaminoceptive areas.
  • DISEASE: Defects in LRRK2 are the cause of Parkinson disease 8 (PARK8) [MIM:607060, 168600]. Parkinson disease (PD) is a complex, multifactorial disorder that typically manifests after the age of 50 years, although early-onset cases (before 50 years) are known. PD generally arises as a sporadic condition but is occasionally inherited as a simple mendelian trait. Although sporadic and familial PD are very similar, inherited forms of the disease usually begin at earlier ages and are associated with atypical clinical features. PD is characterized by bradykinesia, resting tremor, muscular rigidity and postural instability, as well as by a clinically significant response to treatment with levodopa. The pathology involves the loss of dopaminergic neurons in the substantia nigra and the presence of Lewy bodies (intraneuronal accumulations of aggregated proteins), in surviving neurons in various areas of the brain. PARK8 is an autosomal-dominant late-onset parkinsonism, characterized by onset from 50 to 65 years, with slow progression and relatively benign course.
  • SIMILARITY: Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family.
  • SIMILARITY: Contains 16 LRR (leucine-rich) repeats.
  • SIMILARITY: Contains 1 Miro domain.
  • SIMILARITY: Contains 1 protein kinase domain.
  • WEB RESOURCE: Name=GeneReviews; URL="http://www.genetests.org/query?gene=LRRK2";.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AY792511; AAV63975.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK127729; BAC87105.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL834529; CAD39185.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_940980.3; -.
UniGene Hs.187636
3D structure databases
ModBase Q5S007.
PTM databases
PhosphoSite Q5S007; -.
Organism-specific databases
H-InvDB HIX0010547; -.
HGNC HGNC:18618; LRRK2.
GenAtlas LRRK2.
HPA HPA014293; -.
MIM 168600; phenotype. [NCBI / EBI]
607060; phenotype. [NCBI / EBI]
609007; gene. [NCBI / EBI]
Orphanet 2828; Parkinson disease, genetic types.
33540; Parkinson's disease dementia, familial.
PharmGKB PA134968052; -.
GeneCards Q5S007.
Gene expression databases
ArrayExpress Q5S007; -.
CleanEx HS_LRRK2; -.
GermOnline ENSG00000188906; Homo sapiens.
Ontologies
GO
GO:0032473; Cellular component: external side of mitochondrial outer membrane (inferred from direct assay from UniProtKB).
GO:0005624; Cellular component: membrane fraction (inferred from direct assay from UniProtKB).
GO:0005524; Molecular function: ATP binding (inferred by curator from UniProtKB).
GO:0005525; Molecular function: GTP binding (inferred from direct assay from UniProtKB).
GO:0005096; Molecular function: GTPase activator activity (inferred from direct assay from UniProtKB).
GO:0042803; Molecular function: protein homodimerization activity (inferred from physical interaction from UniProtKB).
GO:0004674; Molecular function: protein serine/threonine kinase activity (inferred from direct assay from UniProtKB).
GO:0000165; Biological process: MAPKKK cascade (inferred from direct assay from UniProtKB).
GO:0043068; Biological process: positive regulation of programmed cell death (inferred from direct assay from UniProtKB).
GO:0031398; Biological process: positive regulation of protein ubiquitination (inferred from direct assay from UniProtKB).
GO:0046777; Biological process: protein amino acid autophosphorylation (inferred from direct assay from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR011989; ARM-like.
IPR001611; LRR.
IPR013101; LRR_2.
IPR003591; LRR_sub-typ.
IPR013684; Miro-like.
IPR000719; Prot_kinase_core.
IPR017441; Protein_kinase_ATP_bd_CS.
IPR001806; Ras_trnsfrmng.
IPR017442; Se/Thr_pkinase-rel.
IPR008271; Ser_thr_pkin_AS.
IPR005225; Small_GTP_bd.
IPR015943; WD40/YVTN_repeat-like.
IPR001680; WD40_repeat.
Graphical view of domain structure.
Gene3D G3DSA:1.25.10.10; ARM-like; 1.
G3DSA:2.130.10.10; WD40/YVTN_repeat-like; 1.
Pfam PF00560; LRR_1; 7.
PF07723; LRR_2; 1.
PF08477; Miro; 1.
PF00069; Pkinase; 1.
Pfam graphical view of domain structure.
PRINTS PR00019; LEURICHRPT.
PR00449; RASTRNSFRMNG.
ProDom PD000001; Prot_kinase; 2.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00369; LRR_TYP; 1.
SM00320; WD40; 1.
SMART graphical view of domain structure.
TIGRFAMs TIGR00231; small_GTP; 1.
PROSITE PS00107; PROTEIN_KINASE_ATP; 1.
PS50011; PROTEIN_KINASE_DOM; 1.
PS00108; PROTEIN_KINASE_ST; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q5S007.
Genome annotation databases
Ensembl ENSG00000188906; Homo sapiens. [Contig view]
GeneID 120892; -.
KEGG hsa:120892; -.
Phylogenomic databases
HOGENOM Q5S007; -.
HOVERGEN Q5S007; -.
Other
SOURCE LRRK2; Homo sapiens.
ProtoNet Q5S007.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
ATP-binding; Coiled coil; Cytoplasm; Disease mutation; GTP-binding; GTPase activation; Kinase; Leucine-rich repeat; Membrane; Nucleotide-binding; Parkinson disease; Polymorphism; Repeat; Serine/threonine-protein kinase; Transferase.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom    To Length Description FTId
CHAIN   1   2527  2527     Leucine-rich repeat serine/threonine-protein kinase 2. PRO_0000086238
REPEAT   226    249  24     LRR 1. 
REPEAT   791    815  25     LRR 2. 
REPEAT   981   1004  24     LRR 3. 
REPEAT   1010   1033  24     LRR 4. 
REPEAT   1035   1057  23     LRR 5. 
REPEAT   1059   1081  23     LRR 6. 
REPEAT   1082   1105  24     LRR 7. 
REPEAT   1107   1127  21     LRR 8. 
REPEAT   1128   1151  24     LRR 9. 
REPEAT   1172   1194  23     LRR 10. 
REPEAT   1195   1219  25     LRR 11. 
REPEAT   1221   1243  23