ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry Q5GX78

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name DNAE2_XANOR
Primary accession number Q5GX78
Secondary accession numbers None
Integrated into Swiss-Prot on July 19, 2005
Sequence was last modified on March 1, 2005 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 25)
Name and origin of the protein
Protein name Error-prone DNA polymerase
Synonym EC 2.7.7.7
Gene name
Name: dnaE2
OrderedLocusNames: XOO3439
From
Xanthomonas oryzae pv. oryzae [TaxID: 64187] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=KACC10331 / KXO85;
DOI=10.1093/nar/gki206; PubMed=15673718 [NCBI, ExPASy, EBI, Israel, Japan]
Lee B.-M., Park Y.-J., Park D.-S., Kang H.-W., Kim J.-G., Song E.-S., Park I.-C., Yoon U.-H., Hahn J.-H., Koo B.-S., Lee G.-B., Kim H., Park H.-S., Yoon K.-O., Kim J.-H., Jung C.-H., Koh N.-H., Seo J.-S., Go S.-J.;
"The genome sequence of Xanthomonas oryzae pathovar oryzae KACC10331, the bacterial blight pathogen of rice.";
Nucleic Acids Res. 33:577-586(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE013598; AAW76693.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_202078.1; -.
3D structure databases
ModBase Q5GX78.
Enzyme and pathway databases
BioCyc XORY291331:XOO3439-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0003887; Molecular function: DNA-directed DNA polymerase activity (inferred from electronic annotation from HAMAP).
GO:0045020; Biological process: error-prone DNA repair (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_01902; -; 1.
PBIL [Tree]
InterPro IPR011708; DNA_pol3_alpha.
IPR004365; NA_bd_OB_tRNA-helicase.
IPR004013; PHP_C.
IPR003141; PHP_N.
IPR004805; PolC_alpha.
Graphical view of domain structure.
Pfam PF07733; DNA_pol3_alpha; 1.
PF02811; PHP; 1.
PF01336; tRNA_anti; 1.
Pfam graphical view of domain structure.
SMART SM00481; POLIIIAc; 1.
SMART graphical view of domain structure.
TIGRFAMs TIGR00594; polc; 1.
BLOCKS Q5GX78.
Genome annotation databases
GeneID 3264419; -.
GenomeReviews AE013598_GR; XOO3439.
KEGG xoo:XOO3439; -.
NMPDR fig|291331.3.peg.3546; -.
Phylogenomic databases
HOGENOM Q5GX78; -.
Genome annotation databases
CMR Q5GX78; XOO3439.
Other
ProtoNet Q5GX78.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; DNA damage; DNA repair; DNA replication; DNA-directed DNA polymerase; Nucleotidyltransferase; Transferase.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   1083  1083     Error-prone DNA polymerase. PRO_0000103407
Sequence information
Length: 1083 AA [This is the length of the unprocessed precursor] Molecular weight: 120455 Da [This is the MW of the unprocessed precursor] CRC64: 2F19994AA0FB2727 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MSWDDAIEGV DRDTPGGRMP RAWNVAARLR AANDDISHAH VADGVPTYAE LHCLSDFSFL 

        70         80         90        100        110        120 
RGASSAEQLF ARAQHCGYSA LAITDECSLA GIVRGLEASR VTGVRLIVGS EFTLIDGTRF 

       130        140        150        160        170        180 
VLLVENAHGY PQVCGLVTTA RRAASKGAYR LGRADVEAQF RDVAPGVFAL WLPGVQPQAE 

       190        200        210        220        230        240 
QGAWLQQVFG ERAFLAVELH REQDDGARLQ VLQALAQQLG MTAVASGDVH MAQRRERIVQ 

       250        260        270        280        290        300 
DTLTAIRHTL PLAECGAHLF RNGERHLRTR RALGNIYPDA LLQAAVALAQ RCTFDISKIS 

       310        320        330        340        350        360 
YTYPRELVPE GHTPTSYLRQ LTEAGIRKRW PGGITAKVRE DIEKELALIA LKKYEAFFLT 

       370        380        390        400        410        420 
VQDVVRFARE QNILCQGRGS SANSAVCYAL GITAVNPDET RLLMARFLSE KRDEPPDIDV 

       430        440        450        460        470        480 
DFEHERREEV LQYVYRKYGR ERAALAATVI CYRGKSAVRD VAKAFGLPPD QIALLANCYG 

       490        500        510        520        530        540 
WGNGETPMEQ RIEEAGFDLA NPLINKILLV TEHLRDHPRH LSQHVGGFVI SDEPLSLLVP 

       550        560        570        580        590        600 
VENAAMADRT IIQWDKDDLE TMKLLKVDCL ALGMLTCIRK TLDLVRGHRG RDYSIATLPG 

       610        620        630        640        650        660 
EDLPTYKMIQ RADTVGVFQI ESRAQMAMLP RLKPAEFYDL VIEVAIVRPG PIQGDMVHPY 

       670        680        690        700        710        720 
LRRRQGREDV SYPSPAVEDI LKPTLGVPLF QEQVMELLMH AADYTESEAD NLRRSMAAWR 

       730        740        750        760        770        780 
RGGDMEQHRM RVRERMQGKG YASTFIDQIF EQIKGFGSYG FPQSHAASFA KLVYASCWLK 

       790        800        810        820        830        840 
RHEPAAFACG LLNAQPMGFY SASQIVQDAR RGSPERERVE VLPVDVVHSD WDNTLVGGRP 

       850        860        870        880        890        900 
WRSAADPGEQ PAIRLGMRQV AGLSDVVAQR IVAARTQRAF ADIGDLCLRA ALDEKACLAL 

       910        920        930        940        950        960 
AEAGALQGMV GNRNAARWAM AGVEARRPLL PGSPEERPVA FEAPHAGEEI LADYRSVGLS 

       970        980        990       1000       1010       1020 
LRQHPMALLR PQMRQRRILG LRDLQGRPHG SGVHVAGLVT QRQRPATAKG TIFVTLEDEH 

      1030       1040       1050       1060       1070       1080 
GMINVIVWSH LALRRRRALL ESRLLAVRGR WERVDGVEHL IAGDLHDLSD LLGDMQLPSR 


DFH
Q5GX78 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA) 		Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Hosted by ch flag SIB Switzerland Mirror sites: Australia Brazil Canada China Korea
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!