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UniProtKB/Swiss-Prot entry Q4UN71

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DHSB_RICFE
Primary accession number Q4UN71
Secondary accession numbers None
Integrated into Swiss-Prot on March 20, 2007
Sequence was last modified on July 5, 2005 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 29)
Name and origin of the protein
Protein name Succinate dehydrogenase iron-sulfur subunit
Synonym EC 1.3.99.1
Gene name
Name: sdhB
OrderedLocusNames: RF_0136
From
Rickettsia felis (Rickettsia azadi) [TaxID: 42862] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC VR-1525 / URRWXCal2;
DOI=10.1371/journal.pbio.0030248; PubMed=15984913 [NCBI, ExPASy, EBI, Israel, Japan]
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.;
"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite.";
PLoS Biol. 3:1-12(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000053; AAY60987.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_246152.1; -.
3D structure databases
ModBase Q4UN71.
Enzyme and pathway databases
BioCyc RFEL315456:RF_0136-MON; -.
Ontologies
GO
GO:0000104; Molecular function: succinate dehydrogenase activity (inferred from electronic annotation from EC).
QuickGo view.
Family and domain databases
InterPro IPR006058; 2Fe2S_fd_BS.
IPR001450; 4Fe4S_Fe_S_bd.
IPR012675; b-grasp_ferredoxin-like.
IPR001041; Ferredoxin.
IPR012285; Fum_reductase_C.
IPR004489; Succ_DHase/fum_Rdtase_Fe-S.
Graphical view of domain structure.
Gene3D G3DSA:3.10.20.30; Ferredoxin_fold; 1.
G3DSA:1.10.1060.10; Fum_reductase_C; 1.
Pfam PF00111; Fer2; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR00384; dhsB; 1.
PROSITE PS00197; 2FE2S_FER_1; 1.
PS51085; 2FE2S_FER_2; 1.
PS00198; 4FE4S_FER_1; 1.
PS51379; 4FE4S_FER_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q4UN71.
Genome annotation databases
GeneID 3400637; -.
GenomeReviews CP000053_GR; RF_0136.
KEGG rfe:RF_0136; -.
NMPDR fig|315456.3.peg.655; -.
Phylogenomic databases
HOGENOM Q4UN71; -.
Genome annotation databases
CMR Q4UN71; RF_0136.
Other
ProtoNet Q4UN71.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
2Fe-2S; 3Fe-4S; 4Fe-4S; Complete proteome; Electron transport; Iron; Iron-sulfur; Metal-binding; Oxidoreductase; Transport; Tricarboxylic acid cycle.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   261  261     Succinate dehydrogenase iron-sulfur subunit. PRO_0000280983
DOMAIN   28   119  92     2Fe-2S ferredoxin-type. 
DOMAIN   161   191  31     4Fe-4S ferredoxin-type. 
METAL   80    80        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   85    85        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   88    88        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   100   100        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   171   171        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   174   174        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   177   177        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   181   181        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   228   228        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   234   234        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   238   238        Iron-sulfur 2 (4Fe-4S) (By similarity). 
Sequence information
Length: 261 AA [This is the length of the unprocessed precursor] Molecular weight: 29613 Da [This is the MW of the unprocessed precursor] CRC64: A3BD2326E50BF9B5 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MAELRLPPNS VVKKGKEHKE QEEMLKPRKV KIYRYDPDLD ENPTIDSFEI DLSKTGPMVL 

        70         80         90        100        110        120 
DALIKIKNEI DSTLTFRRSC REGICGSCSM NIDGTNTLAC IKPIEEISGD IKIYPLPHMK 

       130        140        150        160        170        180 
VVKDLVPDMS HFYAQYESIE PWLKTDSPTP SNSERLQSIK GREKLDGLYE CILCACCSTS 

       190        200        210        220        230        240 
CPSYWWNGDK YLGPAILLQA YRWIADSRDD HTGERLEDLE DPSKLYRCHT IMNCTKTCPK 

       250        260 
GLNPAKAIGK IKSLIAERHG V
Q4UN71 in FASTA format

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