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UniProtKB/TrEMBL entry Q2MGT9

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name Q2MGT9_RANTA
Primary accession number Q2MGT9
Secondary accession numbers None
Integrated into TrEMBL on February 21, 2006
Sequence was last modified on February 21, 2006 (Sequence version 1)
Annotations were last modified on    February 10, 2009 (Entry version 15)
Name and origin of the protein
Protein name Sex determining region Y
Synonyms None
Gene name
Name: SRY
From
Rangifer tarandus (Reindeer) (Caribou) [TaxID: 9870] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Rangifer.
Protein existence 4: Predicted;
References
[1]
 NUCLEOTIDE SEQUENCE.
TISSUE=Liver;
Wada K., Nishibori M., Yokohama M.;
"Sry gene in Cervidae.";
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AB247629; BAE78533.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
3D structure databases
SMR Q2MGT9; 51-130.
ModBase Q2MGT9.
Ontologies
GO
GO:0005634; Cellular component: nucleus (inferred from electronic annotation from InterPro).
GO:0005515; Molecular function: protein binding (inferred from electronic annotation from InterPro).
GO:0003700; Molecular function: transcription factor activity (inferred from electronic annotation from InterPro).
GO:0030154; Biological process: cell differentiation (inferred from electronic annotation from UniProtKB-KW).
GO:0030238; Biological process: male sex determination (inferred from electronic annotation from InterPro).
GO:0006355; Biological process: regulation of transcription, DNA-dependent (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR000910; HMG_HMG1/HMG2.
IPR017253; Sex-determining_region_Y.
Graphical view of domain structure.
Gene3D G3DSA:1.10.30.10; HMG-box; 1.
Pfam PF00505; HMG_box; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF037653; SRY; 1.
SMART SM00398; HMG; 1.
SMART graphical view of domain structure.
PROSITE PS50118; HMG_BOX_2; 1.
PROSITE graphical view of domain structure (profiles).
Phylogenomic databases
HOVERGEN Q2MGT9; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Activator; DNA-binding; Differentiation; Nucleus; Sexual differentiation; Transcription; Transcription regulation.
Features
None
Sequence information
Length: 229 AA Molecular weight: 26771 Da CRC64: 541885529C4FB7A8 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MFRVLNDDVY STAKIQQQNP LAFGKASSLF TDNRSANDQC ETGENVRDSG QDHVKRPMNA 

        70         80         90        100        110        120 
FIVWSRERRR KVALENPKMQ NSEISKQLGY EWKRLTDAEK RPFFEEAQRL LAIHRDKYPG 

       130        140        150        160        170        180 
YKYRPRRKTK RHQKLLPADS SILRKQMHVE TLQPFTYRDG CAKTTCSRME SQLSLSQPVT 

       190        200        210        220 
ITNSFLQKEH HSSWTNLGHN RVTLATQISA DFPFYQSLQP GLSCSYFQY
Q2MGT9 in FASTA format

View entry in raw text format (no links)
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