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UniProtKB/Swiss-Prot entry Q2IQ01

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PNP_ANADE
Primary accession number Q2IQ01
Secondary accession numbers None
Integrated into Swiss-Prot on April 29, 2008
Sequence was last modified on April 29, 2008 (Sequence version 2)
Annotations were last modified on    November 25, 2008 (Entry version 21)
Name and origin of the protein
Protein name Polyribonucleotide nucleotidyltransferase
Synonyms EC 2.7.7.8
Polynucleotide phosphorylase
PNPase
Gene name
Name: pnp
OrderedLocusNames: Adeh_1107
From
Anaeromyxobacter dehalogenans (strain 2CP-C) [TaxID: 290397] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Anaeromyxobacter.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M., Kyrpides N., Anderson I., Sanford R.A., Ritalahti K.M., Thomas H.S., Kirby J.R., Zhulin I.B., Loeffler F.E., Richardson P.;
"Complete sequence of Anaeromyxobacter dehalogenans 2CP-C.";
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000251; ABC80882.1; ALT_INIT; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_464319.1; -.
3D structure databases
ModBase Q2IQ01.
Enzyme and pathway databases
BioCyc ADEH290397:ADEH_1107-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0000175; Molecular function: 3'-5'-exoribonuclease activity (inferred from electronic annotation from InterPro).
GO:0004654; Molecular function: polyribonucleotide nucleotidyltransferase activity (inferred from electronic annotation from HAMAP).
GO:0003723; Molecular function: RNA binding (inferred from electronic annotation from InterPro).
GO:0006402; Biological process: mRNA catabolic process (inferred from electronic annotation from HAMAP).
GO:0006396; Biological process: RNA processing (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
HAMAP MF_01595; -; 1.
PBIL [Tree]
InterPro IPR001247; ExoRNase_PH_dom1.
IPR015847; ExoRNase_PH_dom2.
IPR004087; KH.
IPR004088; KH_type_1.
IPR012340; NA-bd_OB-fold.
IPR012162; PNPase.
IPR015848; PNPase_PH_RNA-bd_bac/org-type.
IPR003029; S1_RNA-bd.
Graphical view of domain structure.
Gene3D G3DSA:2.40.50.140; OB_NA_bd_sub; 1.
G3DSA:1.10.10.400; PNPase_PH_RNA-bd_bac/org-type; 1.
PANTHER PTHR11252; PNPase; 1.
Pfam PF00013; KH_1; 1.
PF03726; PNPase; 1.
PF01138; RNase_PH; 2.
PF03725; RNase_PH_C; 2.
PF00575; S1; 1.
Pfam graphical view of domain structure.
SMART SM00322; KH; 1.
SM00316; S1; 1.
SMART graphical view of domain structure.
PROSITE PS50084; KH_TYPE_1; 1.
PS50126; S1; 1.
PROSITE graphical view of domain structure (profiles).
ProtoNet Q2IQ01.
Genome annotation databases
GeneID 3888643; -.
GenomeReviews CP000251_GR; Adeh_1107.
KEGG ade:Adeh_1107; -.
Phylogenomic databases
HOGENOM Q2IQ01; -.
Genome annotation databases
CMR Q2IQ01; Adeh_1107.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; Nucleotidyltransferase; RNA-binding; Transferase.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   721  721     Polyribonucleotide nucleotidyltransferase. PRO_0000329498
DOMAIN   562   621  60     KH. 
DOMAIN   631   699  69     S1 motif. 
Sequence information
Length: 721 AA [This is the length of the unprocessed precursor] Molecular weight: 77920 Da [This is the MW of the unprocessed precursor] CRC64: 01A55B2271539260 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MTPIQKTATV GGKEVLLETG KVAKQAHGSV WVRLGDSIVL VTAVSAAEKK EGIDFFPLTV 

        70         80         90        100        110        120 
DYQEKLFAAG RVPGSFFRRE GRPTEKETLT SRLVDRSCRP LFAEGYSNET QVIATVISFD 

       130        140        150        160        170        180 
QENDTDVLAL TGASAALHIS DIPFGGPIAG VRVARVGGQL VANPTLAQRA DADLDVVMAA 

       190        200        210        220        230        240 
SRDAIVMVEG GAQEVSEAVM IEALLFGQAA VQPLLDAQDA LRAATGNKPR RAFDPPKNDV 

       250        260        270        280        290        300 
ELRAKVKALT WEKVKEAYGR DEKHDRYGRL SEIKKELLQA LKEEAAGDAA KLATIALREK 

       310        320        330        340        350        360 
EIKGYYEDVK YDYMRKMITD ERRRIGGRGM ADIRKITCEV GLLPRVHGSS LFTRGETQAL 

       370        380        390        400        410        420 
VATTLGTAED EQRVEMLTGM VFKKFMLHYN FPPFSVGEVK FLRSPGRREI GHGALAERAL 

       430        440        450        460        470        480 
RAVMPPEDQF PYTVRVVSDI MESNGSSSMA SVCGGCLSLM DAGVPIKAPV AGIAMGLIKE 

       490        500        510        520        530        540 
GEKIAILSDI LGDEDHLGDM DFKVCGTAAG ITSIQMDIKI GGVTREILEQ ALSQAAEGRK 

       550        560        570        580        590        600 
HILGEMAKAL SAPRGSISAY APRITTIKIR PERIKDIIGP GGKTIKDITA RTGTSINIED 

       610        620        630        640        650        660 
DGSVSIASPN QDKVEEAIKM IRGLTQEAEV GRIYMGTVRK IAEFGAFVEI FPGTDGLIHI 

       670        680        690        700        710        720 
SELSDKRVKS VSDVLSEGEE VMVKVISVDR SGKIRLSRKE ALADSAKKSE GTEPPKGEPA 


K
Q2IQ01 in FASTA format

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