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UniProtKB/Swiss-Prot entry Q2IKX7

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name SYD_ANADE
Primary accession number Q2IKX7
Secondary accession numbers None
Integrated into Swiss-Prot on May 16, 2006
Sequence was last modified on March 7, 2006 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 20)
Name and origin of the protein
Protein name Aspartyl-tRNA synthetase
Synonyms EC 6.1.1.12
Aspartate--tRNA ligase
AspRS
Gene name
Name: aspS
OrderedLocusNames: Adeh_2533
From
Anaeromyxobacter dehalogenans (strain 2CP-C) [TaxID: 290397] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Anaeromyxobacter.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M., Kyrpides N., Anderson I., Sanford R.A., Ritalahti K.M., Thomas H.S., Kirby J.R., Zhulin I.B., Loeffler F.E., Richardson P.;
"Complete sequence of Anaeromyxobacter dehalogenans 2CP-C.";
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000251; ABC82303.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_465740.1; -.
3D structure databases
ModBase Q2IKX7.
Enzyme and pathway databases
BioCyc ADEH290397:ADEH_2533-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004815; Molecular function: aspartate-tRNA ligase activity (inferred from electronic annotation from HAMAP).
GO:0005524; Molecular function: ATP binding (inferred from electronic annotation from HAMAP).
GO:0003676; Molecular function: nucleic acid binding (inferred from electronic annotation from InterPro).
GO:0006422; Biological process: aspartyl-tRNA aminoacylation (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00044; -; 1.
PBIL [Tree]
InterPro IPR004364; aa-tRNA-synt_II.
IPR006195; aa-tRNA-synth_II.
IPR002312; Asp-tRNA-synth_IIb.
IPR004524; Asp-tRNA-synth_IIb_bac/mito.
IPR004115; GAD.
IPR012340; NA-bd_OB-fold.
IPR004365; NA_bd_OB_tRNA-helicase.
Graphical view of domain structure.
Gene3D G3DSA:2.40.50.140; OB_NA_bd_sub; 1.
PANTHER PTHR22594; aa-tRNA-synt_II; 1.
PTHR22594:SF5; AspS_bac; 1.
Pfam PF02938; GAD; 1.
PF00152; tRNA-synt_2; 1.
PF01336; tRNA_anti; 1.
Pfam graphical view of domain structure.
PRINTS PR01042; TRNASYNTHASP.
TIGRFAMs TIGR00459; aspS_bact; 1.
PROSITE PS50862; AA_TRNA_LIGASE_II; 1.
PROSITE graphical view of domain structure (profiles).
ProtoNet Q2IKX7.
Genome annotation databases
GeneID 3890134; -.
GenomeReviews CP000251_GR; Adeh_2533.
KEGG ade:Adeh_2533; -.
Phylogenomic databases
HOGENOM Q2IKX7; -.
Genome annotation databases
CMR Q2IKX7; Adeh_2533.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm; Ligase; Nucleotide-binding; Protein biosynthesis.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   603  603     Aspartyl-tRNA synthetase. PRO_0000235506
Sequence information
Length: 603 AA [This is the length of the unprocessed precursor] Molecular weight: 67990 Da [This is the MW of the unprocessed precursor] CRC64: 9F2B7073E523FFE9 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MPRFITELKR THSCGELTKA DIGKEVVLFG WVNNRRDHGG AVFIDLRDRA GLTQVVFEED 

        70         80         90        100        110        120 
VRPDVHELAG QLRLEYCVGV RGKVVSRGGN VNPKLPTGEI EVHASDLEIF NRSEPAPFQI 

       130        140        150        160        170        180 
EDKIDTGEEK RLQYRYLDLR RAPLQQTLMT RAKVNHLTRN YFTDKGFLEL ETPFMVKYTP 

       190        200        210        220        230        240 
GGARNFLVPS RLNPGKFYAL AESPQLFKQL YMMAGFDRYF QIVRCFRDED LRLDRQPEFT 

       250        260        270        280        290        300 
QIDVEMSFVE QNDVFDVMEG LVVKLWKEVL GIEIPRPFQR MPFEESMAKY GNDKPDLRFD 

       310        320        330        340        350        360 
MPHVVLTDLV RQHDGGGVPL MHEAVKAKGI VKAMRVPASA NFSRTEIDKL EEYVKGMGAK 

       370        380        390        400        410        420 
GLARAKVGEG GEWTQSPLAK TITPALRQAI NDACEAKAGD LLLFQFGKES VVHTVMANLR 

       430        440        450        460        470        480 
VHLAKRMGLI PEYGSGGAWR FLWVVNPPLF EYDEESGQWA AAHHAFTRPH DSDLQFLESD 

       490        500        510        520        530        540 
PGKVNCYRYD LVLNGFEIGG GSIRLHDPEV QARVFKAMGI SDEEARSKFG FLLDALKMGA 

       550        560        570        580        590        600 
PPHGGIALGM DRLVMLLTGA ESLRDVVAWP KTQKGTDLMT GAPGDVDARQ LRELYVKSTF 


EPK
Q2IKX7 in FASTA format

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