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[1]
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NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Copeland A.,
Lucas S.,
Lapidus A.,
Barry K.,
Detter J.C.,
Glavina T.,
Hammon N.,
Israni S.,
Pitluck S.,
Brettin T.,
Bruce D.,
Han C.,
Tapia R.,
Gilna P.,
Kiss H.,
Schmutz J.,
Larimer F.,
Land M.,
Kyrpides N., ![]()
Ivanova N.,
McInerney M.J.,
Brockman F.,
Culley D.,
Ferry J.G.,
Gunsalus R.P.,
Morrison M.,
Plugge C.,
Scholten J.,
Stams A.J.M.,
Boone D.R.,
Richardson P.;
"Complete sequence of Methanospirillum hungatei JF-1.";
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases.
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- FUNCTION: Possesses two activities: a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase (By similarity).
- CATALYTIC ACTIVITY: Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).
- CATALYTIC ACTIVITY: Degradation of single-stranded DNA. It acts progressively in a 3'- to 5'-direction, releasing nucleoside 5'-phosphates.
- SUBUNIT: Heterodimer of a large subunit and a small subunit (By similarity).
- PTM: This protein undergoes a protein self splicing that involves a post-translational excision of the intervening region (intein) followed by peptide ligation (Potential).
- SIMILARITY: Belongs to the archaeal DNA polymerase II family.
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Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms.
Distributed under the Creative Commons Attribution-NoDerivs License.
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| Length: 1286 AA [This is the length of the unprocessed precursor] |
Molecular weight: 143304 Da [This is the MW of the unprocessed precursor] |
CRC64: 7169201A09413EB2 [This is a checksum on the sequence] |
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10 20 30 40 50 60
MADISPRMQE YYDRLNAGLA QAMEVAKTAR KTGLDPETVV EIPIANDLAD RVEAQVGIPG
70 80 90 100 110 120
VAQMIRELEA VMSREEASLH IGDYFAEKKF GETTKEEILD HAIRTAMALL TEGVVSAPIE
130 140 150 160 170 180
GIAKVAVKKN DDGSEYLAIY YAGPIRSAGG TAQALSVLVG DYVRRILGMS RYMPREEEIE
190 200 210 220 230 240
RYIEEIRQYN SIMSLQYLPS EREIRLIISN CPVCIDGEPT EKEEVSGHRN LERVETNTVR
250 260 270 280 290 300
GGMALVIAEG LALKAPKVLK NVRKMKMDGW DWLEEMIQAT AGSSSSEEKE VGIHPKDKFL
310 320 330 340 350 360
RDLIGGRPVF SYPMREGGFR LVYGRSRNTG LAAAGLNPAT LHILGDFLAV GTQMKIERPG
370 380 390 400 410 420
KAAGISPVDS IQGPTVRLIN GDVVRIHDAK RARELSSQVS HIIDVGEILI SYGEFMENNH
430 440 450 460 470 480
VLVPSAYCES WWRLEGGTTR PADEDEAILQ CESGLYLHPD YLYLWDDLKP AEIRSLAEFI
490 500 510 520 530 540
HKHGTLADKT LILPLDPTIK EYLERVLCEH QVREGMIRIT PCRIVLKCLG LDSSLALSDS
550 560 570 580 590 600
WEKELPESAL DLVQFLSGMK MRSKAGTRIG GRMGRPGKSK PREMKPAPHV LFPVGEAGGS
610 620 630 640 650 660
RRSVQEASKF SYQANTEGGN LQLEMGVRRC PACGTESYKN RCSCGTHTEP VLSCSRCGIE
670 680 690 700 710 720
VQGPVCPQCG MEPTSVRQYT VNVRQMLQQA FADLGMRDRD VELVKGVKGL VSRNKPVELI
730 740 750 760 770 780
EKGVIRAANK LFVFKDGTVR FDIIDMPLTH FRPREIGVSV ERLRELGYLQ DIYGVPLQNP
790 800 810 820 830 840
DQVLELPPQD ILVPEGCGDY LFSCTRFIDT LLEKVYGLPP FYNLETRSDL VGHLVIGLAP
850 860 870 880 890 900
HTSAGVLARI IGFSKANVGY GHPFFHAAKR RNCFHGDTLI EIYADGILEE IPIRRFVLEH
910 920 930 940 950 960
LDLSQAGVDA LGTFYADPVR PAHVRSVDTG GIPHLRKITS VSVHKAPANL IQFSTSRGKN
970 980 990 1000 1010 1020
LLVTPDHAML VWDVSYLRKI RALEVKIGDA VPVWESGVVI SDRIVSIDYV PCEDERVYCL
1030 1040 1050 1060 1070 1080
TVDRDHNVVG NGIFTGQCDG DEDCVMLLLD GLINFSRSFL PVTRGGSMDA PLVLTSRIDP
1090 1100 1110 1120 1130 1140
TEIDKESHNL DVCATYPIEV YETALRYGNA KDVESLVDRV ERRLNTPAQI EGFFFTHDTS
1150 1160 1170 1180 1190 1200
DISAGPLETM YTQLQSMLDK LDCELSLAKR IRAVDEHDVA ERVLKTHFIR DLQGNLSAFS
1210 1220 1230 1240 1250 1260
KQKFRCTKCN TSYRRMPLAG KCKCGGNIIP TVHEGSVKKY LQMSRQICEE YNITEYTRQR
1270 1280
IEVIDMNIES TFGEEKVEQM GLADFM
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Q2FSF9 in FASTA format |
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