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UniProtKB/Swiss-Prot entry Q28RK3

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PYRC_JANSC
Primary accession number Q28RK3
Secondary accession numbers None
Integrated into Swiss-Prot on January 15, 2008
Sequence was last modified on April 4, 2006 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 18)
Name and origin of the protein
Protein name Dihydroorotase
Synonyms DHOase
EC 3.5.2.3
Gene name
Name: pyrC
OrderedLocusNames: Jann_1742
From
Jannaschia sp. (strain CCS1) [TaxID: 290400] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Chertkov O., Saunders E., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Moran M.A., Belas R., Ye W., Buchan A., Gonzalez J.M., Schell M.A., Richardson P.;
"Complete sequence of chromosome of Jannaschia sp. CCS1.";
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000264; ABD54659.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_509684.1; -.
3D structure databases
ModBase Q28RK3.
Enzyme and pathway databases
BioCyc JSP290400:JANN_1742-MON; -.
Ontologies
GO
GO:0004151; Molecular function: dihydroorotase activity (inferred from electronic annotation from HAMAP).
GO:0008270; Molecular function: zinc ion binding (inferred from electronic annotation from HAMAP).
GO:0006221; Biological process: pyrimidine nucleotide biosynthetic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00219; -; 1.
PBIL [Tree]
InterPro IPR006680; Amidohydro_1.
IPR004721; DHOdimr.
IPR002195; Dihydroorotase_CS.
Graphical view of domain structure.
Pfam PF01979; Amidohydro_1; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001237; DHOdimr; 1.
TIGRFAMs TIGR00856; pyrC_dimer; 1.
PROSITE PS00482; DIHYDROOROTASE_1; 1.
PS00483; DIHYDROOROTASE_2; 1.
BLOCKS Q28RK3.
Genome annotation databases
GeneID 3934190; -.
GenomeReviews CP000264_GR; Jann_1742.
KEGG jan:Jann_1742; -.
Phylogenomic databases
HOGENOM Q28RK3; -.
Genome annotation databases
CMR Q28RK3; Jann_1742.
Other
ProtoNet Q28RK3.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Hydrolase; Metal-binding; Pyrimidine biosynthesis; Zinc.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   347  347     Dihydroorotase. PRO_1000024019
METAL   14    14        Zinc 1 (By similarity). 
METAL   16    16        Zinc 1 (By similarity). 
METAL   100   100        Zinc 1; via carbamate group (By similarity). 
METAL   100   100        Zinc 2; via carbamate group (By similarity). 
METAL   137   137        Zinc 2 (By similarity). 
METAL   175   175        Zinc 2 (By similarity). 
METAL   248   248        Zinc 1 (By similarity). 
MOD_RES   100   100        N6-carboxylysine (By similarity). 
Sequence information
Length: 347 AA [This is the length of the unprocessed precursor] Molecular weight: 37943 Da [This is the MW of the unprocessed precursor] CRC64: D0BA18015744F768 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MTQSLTIRRP DDWHLHLRDG AMMRAVLPET ARHFARAIIM PNLVPPVVTA QDALAYRDRI 

        70         80         90        100        110        120 
EAALPDGADF TPLMTLYLTE QTDPDDVEAA FADGLIHAVK LYPAGATTNS QSGVATLKNV 

       130        140        150        160        170        180 
YPVLERMAQI GLPLCIHGEV TDPQVDIFDR EQAFIDTVLI PLRADLPDLK VTLEHITTSH 

       190        200        210        220        230        240 
GIDYVVGADG DIAGTITTHH LMINRNHMLV GGIRPHYYCL PIVKRASHQH ALRRAATSGH 

       250        260        270        280        290        300 
PRFFLGTDSA PHLDGAKETA CGCAGVFSAT NTMSCLAHVF DEDGALVNLE AFTSLNGPAR 

       310        320        330        340 
YGLAPNAATM TLEKRDHPTN YPAKFDTDDG PLTLFDPSTP LYWHVKD
Q28RK3 in FASTA format

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