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UniProtKB/Swiss-Prot entry Q28397


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name MMP3_HORSE
Primary accession number Q28397
Secondary accession numbers None
Integrated into Swiss-Prot on May 30, 2000
Sequence was last modified on November 1, 1996 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 73)
Name and origin of the protein
Protein name Stromelysin-1 [Precursor]
Synonyms SL-1
EC 3.4.24.17
Matrix metalloproteinase-3
MMP-3
Gene name
Name: MMP3
From
Equus caballus (Horse) [TaxID: 9796] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Cartilage;
PubMed=9858406 [NCBI, ExPASy, EBI, Israel, Japan]
Richardson D.W., Dodge G.R.;
"Molecular characteristics of equine stromelysin and the tissue inhibitor of metalloproteinase 1.";
Am. J. Vet. Res. 59:1557-1562(1998).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Cartilage;
PubMed=9442239 [NCBI, ExPASy, EBI, Israel, Japan]
Balkman C.E., Nixon A.J.;
"Molecular cloning and cartilage gene expression of equine stromelysin 1 (matrix metalloproteinase 3).";
Am. J. Vet. Res. 59:30-36(1998).
[3]
3D-STRUCTURE MODELING.
Mallena S.C., Sharma J.A.R.P.;
"Theoretical model of horse stromelysin.";
Submitted (MAR-2002) to the PDB data bank.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U62529; AAB05774.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_001075964.1; -.
UniGene Eca.8032
3D structure databases
PDB
1L9I; Model; -; A=100-267.[ExPASy / RCSB / EBI]
PDBsum 1L9I; -.
ModBase Q28397.
Protein family/group databases
MEROPS M10.005; -.
Family and domain databases
InterPro IPR000585; Hemopexin.
IPR001818; Pept_M10A_M12B.
IPR016293; Pept_M10A_matrix.
IPR006025; Pept_M_Zn_BS.
IPR006026; Peptidase_M.
IPR002477; Peptidoglycan-bd-like.
Graphical view of domain structure.
Gene3D G3DSA:2.110.10.10; Hemopexin; 1.
Pfam PF00045; Hemopexin; 4.
PF00413; Peptidase_M10; 1.
PF01471; PG_binding_1; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001191; Peptidase_M10A_matrix; 1.
PRINTS PR00138; MATRIXIN.
SMART SM00120; HX; 4.
SM00235; ZnMc; 1.
SMART graphical view of domain structure.
PROSITE PS00546; CYSTEINE_SWITCH; FALSE_NEG.
PS00024; HEMOPEXIN; 1.
PS00142; ZINC_PROTEASE; 1.
BLOCKS Q28397.
Genome annotation databases
GeneID 100034195; -.
Phylogenomic databases
HOVERGEN Q28397; -.
Other
ProtoNet Q28397.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Calcium; Collagen degradation; Extracellular matrix; Glycoprotein; Hydrolase; Metal-binding; Metalloprotease; Protease; Repeat; Secreted; Signal; Zinc; Zymogen.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    17  17     Potential. 
PROPEP   18    99  82     Activation peptide. PRO_0000028726
CHAIN   100   477  378     Stromelysin-1. PRO_0000028727
DOMAIN   296   338  43     Hemopexin-like 1. 
DOMAIN   340   383  44     Hemopexin-like 2. 
DOMAIN   388   435  48     Hemopexin-like 3. 
DOMAIN   437   477  41     Hemopexin-like 4. 
MOTIF   90    97  8     Cysteine switch (By similarity). 
ACT_SITE   219   219        By similarity. 
METAL   92    92        Zinc 2; in inhibited form (By similarity). 
METAL   124   124        Calcium 1 (By similarity). 
METAL   158   158        Calcium 2 (By similarity). 
METAL   168   168        Zinc 1 (By similarity). 
METAL   170   170        Zinc 1 (By similarity). 
METAL   175   175        Calcium 3 (By similarity). 
METAL   176   176        Calcium 3; via carbonyl oxygen (By similarity). 
METAL   178   178        Calcium 3; via carbonyl oxygen (By similarity). 
METAL   180   180        Calcium 3; via carbonyl oxygen (By similarity). 
METAL   183   183        Zinc 1 (By similarity). 
METAL   190   190        Calcium 2; via carbonyl oxygen (By similarity). 
METAL   192   192        Calcium 2; via carbonyl oxygen (By similarity). 
METAL   194   194        Calcium 2 (By similarity). 
METAL   196   196        Zinc 1 (By similarity). 
METAL   198   198        Calcium 3 (By similarity). 
METAL   199   199        Calcium 1 (By similarity). 
METAL   201   201        Calcium 1 (By similarity). 
METAL   201   201        Calcium 3 (By similarity). 
METAL   218   218        Zinc 2; catalytic (By similarity). 
METAL   222   222        Zinc 2; catalytic (By similarity). 
METAL   228   228        Zinc 2; catalytic (By similarity). 
METAL   297   297        Calcium 4; via carbonyl oxygen (By similarity). 
METAL   389   389        Calcium 4; via carbonyl oxygen (By similarity). 
METAL   438   438        Calcium 4; via carbonyl oxygen (By similarity). 
CARBOHYD   120   120        N-linked (GlcNAc...) (Potential). 
DISULFID   290   477        By similarity. 
CONFLICT   346   346        V -> E (in Ref. 2). 
STRAND   110   118  9      
HELIX   127   144  18      
STRAND   148   151  4      
STRAND   153   155  3      
STRAND   158   164  7      
STRAND   169   172  4      
STRAND   176   179  4      
STRAND   182   184  3      
STRAND   187   189  3      
TURN   190   193  4      
STRAND   195   198  4      
STRAND   203   211  9      
HELIX   212   224  13      
STRAND   237   239  3      
STRAND   246   248  3      
HELIX   253   263  11      
Sequence information
Length: 477 AA [This is the length of the unprocessed precursor] Molecular weight: 54190 Da [This is the MW of the unprocessed precursor] CRC64: 361CE1427E09A272 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MKNLPILLLL CVAACSAYPL DRSARDEDSN MDLLQDYLEK YYDLGKEMRQ YVRRKDSGPI 

        70         80         90        100        110        120 
VKKIQEMQKF LGLKVTGKLD SDTVEVMHKS RCGVPDVGHF TTFPGMPKWS KTHLTYRIVN 

       130        140        150        160        170        180 
YTQDLPRDAV DSDVEKALKI WEEVTPLTFS RIYEGEADIM ITFAVREHGD FFPFDGPGKV 

       190        200        210        220        230        240 
LAHAYPPGPG MNGDAHFDDD EHWTKDASGI NFLLVAAHEL GHSLGLYHST NTEALMYPLY 

       250        260        270        280        290        300 
NTLKGPARVR LSQDDVTGIQ SLYGPPPASP DSPVEPSEPE PPAPGTLAMC DPALSFDAIS 

       310        320        330        340        350        360 
TLRGEILFFK DRYFWRKTFR TLVPEFHPIS SFWPSLPSGI DAAYEVTSRD SVFIFKGNKF 

       370        380        390        400        410        420 
WAIRGNEEQA GYPRGIHTLG FPPTVRKIDA AIFDKEKQKT YFFVEDKYWR FDEKRQSMEP 

       430        440        450        460        470 
GYPKQIAEDF PGIDSKLDAA FESFGFFYFF SGSSQFEFDP NAKKVTHVLK SNSWFNC 

Q28397 in FASTA format

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