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UniProtKB/Swiss-Prot entry Q1RGP3

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DHSB_RICBR
Primary accession number Q1RGP3
Secondary accession numbers None
Integrated into Swiss-Prot on March 20, 2007
Sequence was last modified on May 16, 2006 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 21)
Name and origin of the protein
Protein name Succinate dehydrogenase iron-sulfur subunit
Synonym EC 1.3.99.1
Gene name
Name: sdhB
OrderedLocusNames: RBE_1390
From
Rickettsia bellii (strain RML369-C) [TaxID: 336407] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1371/journal.pgen.0020076; PubMed=16703114 [NCBI, ExPASy, EBI, Israel, Japan]
Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.;
"Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens.";
PLoS Genet. 2:733-744(2006).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000087; ABE05471.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_538560.1; -.
3D structure databases
ModBase Q1RGP3.
Enzyme and pathway databases
BioCyc RBEL336407:RBE_1390-MON; -.
Family and domain databases
InterPro IPR006058; 2Fe2S_fd_BS.
IPR001450; 4Fe4S_Fe_S_bd.
IPR012675; b-grasp_ferredoxin-like.
IPR001041; Ferredoxin.
IPR012285; Fum_reductase_C.
IPR004489; Succ_DHase/fum_Rdtase_Fe-S.
Graphical view of domain structure.
Gene3D G3DSA:3.10.20.30; Ferredoxin_fold; 1.
G3DSA:1.10.1060.10; Fum_reductase_C; 1.
Pfam PF00111; Fer2; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR00384; dhsB; 1.
PROSITE PS00197; 2FE2S_FER_1; 1.
PS51085; 2FE2S_FER_2; 1.
PS00198; 4FE4S_FER_1; 1.
PS51379; 4FE4S_FER_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q1RGP3.
Genome annotation databases
GeneID 3995557; -.
GenomeReviews CP000087_GR; RBE_1390.
KEGG rbe:RBE_1390; -.
Phylogenomic databases
HOGENOM Q1RGP3; -.
Genome annotation databases
CMR Q1RGP3; RBE_1390.
Other
ProtoNet Q1RGP3.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
2Fe-2S; 3Fe-4S; 4Fe-4S; Complete proteome; Electron transport; Iron; Iron-sulfur; Metal-binding; Oxidoreductase; Transport; Tricarboxylic acid cycle.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   261  261     Succinate dehydrogenase iron-sulfur subunit. PRO_0000280982
DOMAIN   28   119  92     2Fe-2S ferredoxin-type. 
DOMAIN   161   191  31     4Fe-4S ferredoxin-type. 
METAL   80    80        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   85    85        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   88    88        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   100   100        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   171   171        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   174   174        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   177   177        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   181   181        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   228   228        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   234   234        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   238   238        Iron-sulfur 2 (4Fe-4S) (By similarity). 
Sequence information
Length: 261 AA [This is the length of the unprocessed precursor] Molecular weight: 29426 Da [This is the MW of the unprocessed precursor] CRC64: 841BDB90E88F7376 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MAELRLPPNS VVKKGKEHKA KGDVSNLRKI KIYRYDPDLD ENPTIDSFEI DLSKTGPMVL 

        70         80         90        100        110        120 
DALIKIKNEI DSTVTFRRSC REGICGSCAM NIDGTNTLAC IKPIEEISGD IKIYPLPHMK 

       130        140        150        160        170        180 
VVKDLVPDMS HFYAQYESIE PWLKTDSPAP SNAERLQSIK DREKLDGLYE CILCACCSTS 

       190        200        210        220        230        240 
CPSYWWNGDK YLGPAILLQA YRWIADSRDD HTGERLEALE DPFKLYRCHT IMNCTKTCPK 

       250        260 
GLNPAKAISE IKGLIAERHG V
Q1RGP3 in FASTA format

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