ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry Q1R6S0

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name TTDA_ECOUT
Primary accession number Q1R6S0
Secondary accession numbers None
Integrated into Swiss-Prot on November 28, 2006
Sequence was last modified on May 16, 2006 (Sequence version 1)
Annotations were last modified on    June 16, 2009 (Entry version 19)
Name and origin of the protein
Protein name L(+)-tartrate dehydratase subunit alpha
Synonyms L-TTD alpha
EC 4.2.1.32
Gene name
Name: ttdA
OrderedLocusNames: UTI89_C3497
From
Escherichia coli (strain UTI89 / UPEC) [TaxID: 364106] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
Protein existence 2: Evidence at transcript level;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1073/pnas.0600938103; PubMed=16585510 [NCBI, ExPASy, EBI, Israel, Japan]
Chen S.L., Hung C.-S., Xu J., Reigstad C.S., Magrini V., Sabo A., Blasiar D., Bieri T., Meyer R.R., Ozersky P., Armstrong J.R., Fulton R.S., Latreille J.P., Spieth J., Hooton T.M., Mardis E.R., Hultgren S.J., Gordon J.I.;
"Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach.";
Proc. Natl. Acad. Sci. U.S.A. 103:5977-5982(2006).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000243; ABE08944.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_542475.1; -.
3D structure databases
ModBase Q1R6S0.
Enzyme and pathway databases
BioCyc ECOL364106:UTI89_C3497-MON; -.
Ontologies
GO
GO:0051539; Molecular function: 4 iron, 4 sulfur cluster binding (inferred from electronic annotation from UniProtKB-KW).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0008730; Molecular function: L(+)-tartrate dehydratase activity (inferred from electronic annotation from EC).
QuickGo view.
Family and domain databases
InterPro IPR004646; TtdA_fumA_fumB.
Graphical view of domain structure.
Pfam PF05681; Fumerase; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR00722; ttdA_fumA_fumB; 1.
Genome annotation databases
GeneID 3993903; -.
GenomeReviews CP000243_GR; UTI89_C3497.
KEGG eci:UTI89_C3497; -.
Phylogenomic databases
HOGENOM Q1R6S0; -.
OMA Q1R6S0; VNACPPL.
Genome annotation databases
CMR Q1R6S0; UTI89_C3497.
Other
ProtoNet Q1R6S0.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
4Fe-4S; Complete proteome; Iron; Iron-sulfur; Lyase; Metal-binding.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   303  303     L(+)-tartrate dehydratase subunit alpha. PRO_0000262699
METAL   71    71        Iron-sulfur (By similarity). 
METAL   190   190        Iron-sulfur (By similarity). 
METAL   277   277        Iron-sulfur (By similarity). 
Sequence information
Length: 303 AA [This is the length of the unprocessed precursor] Molecular weight: 32706 Da [This is the MW of the unprocessed precursor] CRC64: 720CA4CDBA8B6136 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MMSESNKQQA VNKLTEIVAN FTAMISTRMP DDVVDKLKQL KDAETSSMGK IIYHTMFDNM 

        70         80         90        100        110        120 
QKAIDLNRPA CQDTGEIMFF VKVGSRFPLL GELQSILKQA VEEATVKAPL RHNAVEIFDE 

       130        140        150        160        170        180 
VNTGKNTGSG VPWVTWDIVP DGDDAEIEVY MAGGGCTLPG RSKVLMPSEG YEGVVKFVFE 

       190        200        210        220        230        240 
NISTLAVNAC PPVLVGVGIA TSVETAAVLS RKAILRPIGS RHPNPKAAEL ELRLEEGLNR 

       250        260        270        280        290        300 
LGIGPQGLTG NSSVMGVHIE SAARHPSTIG VAVSTGCWAH RRGTLRVHAD LTFENLSHTR 


SAL
Q1R6S0 in FASTA format

View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA) 		Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Hosted by ch flag SIB Switzerland Mirror sites: Australia Brazil Canada China Korea
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!