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UniProtKB/Swiss-Prot entry Q15723


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ELF2_HUMAN
Primary accession number Q15723
Secondary accession numbers Q15724 Q15725 Q6P1K5
Integrated into Swiss-Prot on June 21, 2005
Sequence was last modified on June 21, 2005 (Sequence version 2)
Annotations were last modified on    June 16, 2009 (Entry version 72)
Name and origin of the protein
Protein name ETS-related transcription factor Elf-2
Synonyms E74-like factor 2
New ETS-related factor
Gene name
Name: ELF2
Synonyms: NERF
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1; 2; 3 AND 5), FUNCTION, AND TISSUE SPECIFICITY.
TISSUE=Fetal brain, Fetal liver, and Spleen;
PubMed=8756667 [NCBI, ExPASy, EBI, Israel, Japan]
Oettgen P., Akbarali Y., Boltax J., Best J., Kunsch C., Libermann T.A.;
"Characterization of NERF, a novel transcription factor related to the Ets factor ELF-1.";
Mol. Cell. Biol. 16:5091-5106(1996).
[2]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2).
TISSUE=Chronic myeloid leukemia cell;
Wilkinson D.A., Neale G.A.M., Mao S., Fernandes E.R., Davenport J.W., Naeve C.W., Goorha R.M.;
Submitted (APR-2000) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 3 AND 4).
TISSUE=Testis;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4]
INTERACTION WITH RUNX1.
PubMed=10207087 [NCBI, ExPASy, EBI, Israel, Japan]
Mao S., Frank R.C., Zhang J., Miyazaki Y., Nimer S.D.;
"Functional and physical interactions between AML1 proteins and an ETS protein, MEF: implications for the pathogenesis of t(8;21)-positive leukemias.";
Mol. Cell. Biol. 19:3635-3644(1999).
[5]
FUNCTION, AND INTERACTION WITH RUNX1.
DOI=10.1074/jbc.M309074200; PubMed=14970218 [NCBI, ExPASy, EBI, Israel, Japan]
Cho J.-Y., Akbarali Y., Zerbini L.F., Gu X., Boltax J., Wang Y., Oettgen P., Zhang D.-E., Libermann T.A.;
"Isoforms of the Ets transcription factor NERF/ELF-2 physically interact with AML1 and mediate opposing effects on AML1-mediated transcription of the B cell-specific blk gene.";
J. Biol. Chem. 279:19512-19522(2004).
[6]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-191, AND MASS SPECTROMETRY.
TISSUE=Epithelium;
DOI=10.1073/pnas.0404720101; PubMed=15302935 [NCBI, ExPASy, EBI, Israel, Japan]
Beausoleil S.A., Jedrychowski M., Schwartz D., Elias J.E., Villen J., Li J., Cohn M.A., Cantley L.C., Gygi S.P.;
"Large-scale characterization of HeLa cell nuclear phosphoproteins.";
Proc. Natl. Acad. Sci. U.S.A. 101:12130-12135(2004).
[7]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-363 AND SER-372, AND MASS SPECTROMETRY.
DOI=10.1073/pnas.0805139105; PubMed=18669648 [NCBI, ExPASy, EBI, Israel, Japan]
Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P.;
"A quantitative atlas of mitotic phosphorylation.";
Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008).
Comments
  • FUNCTION: Isoform 1 transcriptionally activates the LYN and BLK promoters and acts synergistically with RUNX1 to transactivate the BLK promoter. Isoform 2 may function in repression of RUNX1-mediated transactivation.
  • SUBUNIT: Interacts with the LIM domains of LMO2 (By similarity). Interacts via its N-terminal region with RUNX1.
  • INTERACTION:
    Q01196:RUNX1; NbExp=2; IntAct=EBI-956941, EBI-925904;
  • SUBCELLULAR LOCATION: Nucleus.
  • ALTERNATIVE PRODUCTS: 5 named isoforms [FASTA] produced by alternative splicing.
    Name5
    SynonymsNERF-2b
    Isoform IDQ15723-5
    This is the isoform sequence displayed in this entry.
    Name1
    SynonymsNERF-2, NERF-2a
    Isoform IDQ15723-1
    Features which should be applied to build the isoform sequence: VSP_014155.
    Name2
    SynonymsNERF-1a
    Isoform IDQ15723-2
    Features which should be applied to build the isoform sequence: VSP_014154, VSP_014155.
    Name3
    SynonymsNERF-1b
    Isoform IDQ15723-3
    Features which should be applied to build the isoform sequence: VSP_014154.
    Name4
    Isoform IDQ15723-4
    Note: No experimental confirmation available.
    Features which should be applied to build the isoform sequence: VSP_014154, VSP_014156, VSP_014157, VSP_014158.
  • TISSUE SPECIFICITY: Expressed in all fetal and adult tissues examined. Among fetal tissues, highest levels of expression detected in heart, lung, liver and kidney, and lower levels in brain. Among adult tissues, highest levels of expression detected in heart, placenta, lung, skeletal muscle, spleen, thymus, testis and ovary. Moderate expression in prostate, small intestine, kidney, liver and pancreas, and weak expression in colon, brain and peripheral blood lymphocytes.
  • SIMILARITY: Belongs to the ETS family.
  • SIMILARITY: Contains 1 ETS DNA-binding domain.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U43188; AAB37759.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U43189; AAB37760.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U43189; AAB37761.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF256222; AAF67195.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF256223; AAF67196.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC034951; AAH34951.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC065025; AAH65025.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00009995; -.
IPI00396265; -.
IPI00439925; -.
IPI00607557; -.
IPI00607896; -.
PIR G02318; G02318.
RefSeq NP_006865.1; -.
NP_973728.1; -.
UniGene Hs.634040
3D structure databases
HSSP P14921; 2STT. [HSSP ENTRY / PDB]
ModBase Q15723.
Protein-protein interaction databases
IntAct Q15723; 1.
PTM databases
PhosphoSite Q15723; -.
Enzyme and pathway databases
Pathway_Interaction_DB angiopoietinreceptor_pathway; Angiopoietin receptor Tie2-mediated signaling.
Organism-specific databases
GeneCards GC04M140198; -.
H-InvDB HIX0024562; -.
HGNC HGNC:3317; ELF2.
GenAtlas ELF2.
HPA HPA006057; -.
PharmGKB PA27745; -.
Gene expression databases
ArrayExpress Q15723; -.
Bgee Q15723; -.
CleanEx HS_ELF2; -.
GermOnline ENSG00000109381; Homo sapiens.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from direct assay from HPA).
GO:0005634; Cellular component: nucleus (inferred by curator from UniProtKB).
GO:0005515; Molecular function: protein binding (inferred from physical interaction from UniProtKB).
GO:0043565; Molecular function: sequence-specific DNA binding (inferred from electronic annotation from InterPro).
GO:0016563; Molecular function: transcription activator activity (inferred from direct assay from UniProtKB).
GO:0003700; Molecular function: transcription factor activity (inferred from electronic annotation from InterPro).
GO:0006357; Biological process: regulation of transcription from RNA polymerase II promoter (inferred from direct assay from UniProtKB).
GO:0006350; Biological process: transcription (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR000418; Ets.
IPR011991; Wing_hlx_DNA_bd.
Graphical view of domain structure.
Gene3D G3DSA:1.10.10.10; Wing_hlx_DNA_bd; 1.
Pfam PF00178; Ets; 1.
Pfam graphical view of domain structure.
PRINTS PR00454; ETSDOMAIN.
SMART SM00413; ETS; 1.
SMART graphical view of domain structure.
PROSITE PS00345; ETS_DOMAIN_1; 1.
PS00346; ETS_DOMAIN_2; 1.
PS50061; ETS_DOMAIN_3; 1.
PROSITE graphical view of domain structure (profiles).
Genome annotation databases
Ensembl ENSG00000109381; Homo sapiens. [Contig view]
GeneID 1998; -.
KEGG hsa:1998; -.
Phylogenomic databases
HOGENOM Q15723; -.
HOVERGEN Q15723; -.
OMA Q15723; VPTQQAS.
Other
NextBio 8081; -.
ProtoNet Q15723.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Activator; Alternative splicing; DNA-binding; Nucleus; Phosphoprotein; Transcription; Transcription regulation.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   593  593     ETS-related transcription factor Elf-2. PRO_0000204087
DNA_BIND   208   290  83     ETS. 
MOD_RES   191   191        Phosphoserine. 
MOD_RES   363   363        Phosphoserine. 
MOD_RES   372   372        Phosphoserine. 
VAR_SEQ   1    79        MTSAVVDSGGTILELSSNGVENQEESEKVSEYPAVIVEPV PSARLEQGYAAQVLVYDDETYMMQDVAEEQEVETENVET -> MATSLHEGPTNQLDLLIRA (in isoform 2, isoform 3 and isoform 4). VSP_014154
VAR_SEQ   117   129        PVEVFVPPCVSTP -> P (in isoform 1 and isoform 2). VSP_014155
VAR_SEQ   175   203        Missing (in isoform 4). VSP_014156
VAR_SEQ   544   546        QEH -> ART (in isoform 4). VSP_014157
VAR_SEQ   547   593        Missing (in isoform 4). VSP_014158
Sequence information
Length: 593 AA [This is the length of the unprocessed precursor] Molecular weight: 63967 Da [This is the MW of the unprocessed precursor] CRC64: B67013B453559910 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MTSAVVDSGG TILELSSNGV ENQEESEKVS EYPAVIVEPV PSARLEQGYA AQVLVYDDET 

        70         80         90        100        110        120 
YMMQDVAEEQ EVETENVETV EASVHSSNAH CTDKTIEAAE ALLHMESPTC LRDSRSPVEV 

       130        140        150        160        170        180 
FVPPCVSTPE FIHAAMRPDV ITETVVEVST EESEPMDTSP IPTSPDSHEP MKKKKVGRKP 

       190        200        210        220        230        240 
KTQQSPISNG SPELGIKKKP REGKGNTTYL WEFLLDLLQD KNTCPRYIKW TQREKGIFKL 

       250        260        270        280        290        300 
VDSKAVSKLW GKHKNKPDMN YETMGRALRY YYQRGILAKV EGQRLVYQFK DMPKNIVVID 

       310        320        330        340        350        360 
DDKSETCNED LAGTTDEKSL ERVSLSAESL LKAASSVRSG KNSSPINCSR AEKGVARVVN 

       370        380        390        400        410        420 
ITSPGHDASS RSPTTTASVS ATAAPRTVRV AMQVPVVMTS LGQKISTVAV QSVNAGAPLI 

       430        440        450        460        470        480 
TSTSPTTATS PKVVIQTIPT VMPASTENGD KITMQPAKII TIPATQLAQC QLQTKSNLTG 

       490        500        510        520        530        540 
SGSINIVGTP LAVRALTPVS IAHGTPVMRL SMPTQQASGQ TPPRVISAVI KGPEVKSEAV 

       550        560        570        580        590 
AKKQEHDVKT LQLVEEKPAD GNKTVTHVVV VSAPSAIALP VTMKTEGLVT CEK 

Q15723 in FASTA format

View entry in raw text format (no links)
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