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UniProtKB/Swiss-Prot entry Q13705


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name AVR2B_HUMAN
Primary accession number Q13705
Secondary accession number Q4VAV0
Integrated into Swiss-Prot on November 1, 1997
Sequence was last modified on May 16, 2006 (Sequence version 3)
Annotations were last modified on    September 23, 2008 (Entry version 89)
Name and origin of the protein
Protein name Activin receptor type-2B [Precursor]
Synonyms EC 2.7.11.30
Activin receptor type IIB
ACTR-IIB
Gene name
Name: ACVR2B
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Brain;
PubMed=8161782 [NCBI, ExPASy, EBI, Israel, Japan]
Hilden K., Tuuri T., Eramaa M., Ritvos O.;
"Expression of type II activin receptor genes during differentiation of human K562 cells and cDNA cloning of the human type IIB activin receptor.";
Blood 83:2163-2170(1994).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1007/s100380050054; PubMed=9621519 [NCBI, ExPASy, EBI, Israel, Japan]
Ishikawa S., Kai M., Murata Y., Tamari M., Daigo Y., Murano T., Ogawa M., Nakamura Y.;
"Genomic organization and mapping of the human activin receptor type IIB (hActR-IIB) gene.";
J. Hum. Genet. 43:132-134(1998).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], ALTERNATIVE SPLICING, AND VARIANTS LEFT-RIGHT AXIS MALFORMATIONS HIS-40 AND ILE-494.
DOI=10.1002/(SICI)1096-8628(19990101)82:1<70::AID-AJMG14>3.0.CO;2-Y; PubMed=9916847 [NCBI, ExPASy, EBI, Israel, Japan]
Kosaki R., Gebbia M., Kosaki K., Lewin M., Bowers P., Towbin J.A., Casey B.;
"Left-right axis malformations associated with mutations in ACVR2B, the gene for human activin receptor type IIB.";
Am. J. Med. Genet. 82:70-76(1999).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[5]
VARIANT [LARGE SCALE ANALYSIS] ARG-176.
DOI=10.1038/nature05610; PubMed=17344846 [NCBI, ExPASy, EBI, Israel, Japan]
Greenman C., Stephens P., Smith R., Dalgliesh G.L., Hunter C., Bignell G., Davies H., Teague J., Butler A., Stevens C., Edkins S., O'Meara S., Vastrik I., Schmidt E.E., Avis T., Barthorpe S., Bhamra G., Buck G., Choudhury B., Clements J., Cole J., Dicks E., Forbes S., Gray K., Halliday K., Harrison R., Hills K., Hinton J., Jenkinson A., Jones D., Menzies A., Mironenko T., Perry J., Raine K., Richardson D., Shepherd R., Small A., Tofts C., Varian J., Webb T., West S., Widaa S., Yates A., Cahill D.P., Louis D.N., Goldstraw P., Nicholson A.G., Brasseur F., Looijenga L., Weber B.L., Chiew Y.-E., DeFazio A., Greaves M.F., Green A.R., Campbell P., Birney E., Easton D.F., Chenevix-Trench G., Tan M.-H., Khoo S.K., Teh B.T., Yuen S.T., Leung S.Y., Wooster R., Futreal P.A., Stratton M.R.;
"Patterns of somatic mutation in human cancer genomes.";
Nature 446:153-158(2007).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X77533; CAA54671.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB008681; BAA24180.2; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF060202; AAC64515.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF060199; AAC64515.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF060200; AAC64515.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF060201; AAC64515.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC096243; AAH96243.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC096244; AAH96244.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC099642; AAH99642.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR I37134; I37134.
RefSeq NP_001097.2; -.
UniGene Hs.174273
3D structure databases
PDB
2H62; X-ray; 1.85 A; D=19-116.[ExPASy / RCSB / EBI]
PDBsum 2H62; -.
ModBase Q13705.
Protein-protein interaction databases
IntAct Q13705; -.
Organism-specific databases
HGNC HGNC:174; ACVR2B.
GenAtlas ACVR2B.
MIM 602730; gene+phenotype. [NCBI / EBI]
PharmGKB PA24495; -.
GeneCards Q13705.
Gene expression databases
ArrayExpress Q13705; -.
CleanEx HS_ACVR2B; -.
GermOnline ENSG00000114739; Homo sapiens.
Ontologies
GO
GO:0009986; Cellular component: cell surface (inferred from direct assay from UniProtKB).
GO:0005737; Cellular component: cytoplasm (inferred from direct assay from HGNC).
GO:0005887; Cellular component: integral to plasma membrane (traceable author statement from ProtInc).
GO:0019838; Molecular function: growth factor binding (inferred from physical interaction from HGNC).
GO:0004674; Molecular function: protein serine/threonine kinase activity (inferred from mutant phenotype from HGNC).
GO:0009952; Biological process: anterior/posterior pattern formation (inferred from mutant phenotype from HGNC).
GO:0030509; Biological process: BMP signaling pathway (inferred from direct assay from UniProtKB).
GO:0032927; Biological process: positive regulation of activin receptor signaling pathway (inferred from direct assay from HGNC).
GO:0030501; Biological process: positive regulation of bone mineralization (inferred from mutant phenotype from UniProtKB).
GO:0045669; Biological process: positive regulation of osteoblast differentiation (inferred from mutant phenotype from UniProtKB).
GO:0045449; Biological process: regulation of transcription (inferred from direct assay from HGNC).
QuickGo view.
Family and domain databases
InterPro IPR000333; Activin_II_recpt.
IPR015768; Activin_II_recpt_C.
IPR000472; Activin_rcpt.
IPR000719; Prot_kinase_core.
IPR017441; Protein_kinase_ATP_bd_CS.
IPR017442; Se/Thr_pkinase-rel.
IPR008271; Ser_thr_pkin_AS.
Graphical view of domain structure.
PANTHER PTHR23255:SF10; Activin_II_recpt_C; 1.
Pfam PF01064; Activin_recp; 1.
PF00069; Pkinase; 1.
Pfam graphical view of domain structure.
PRINTS PR00653; ACTIVIN2R.
ProDom PD000001; Prot_kinase; 1.
[Domain structure / List of seq. sharing at least 1 domain]
PROSITE PS00107; PROTEIN_KINASE_ATP; FALSE_NEG.
PS50011; PROTEIN_KINASE_DOM; 1.
PS00108; PROTEIN_KINASE_ST; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q13705.
Genome annotation databases
Ensembl ENSG00000114739; Homo sapiens. [Contig view]
GeneID 93; -.
KEGG hsa:93; -.
Phylogenomic databases
HOVERGEN Q13705; -.
Other
SOURCE ACVR2B; Homo sapiens.
ProtoNet Q13705.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Alternative splicing; ATP-binding; Disease mutation; Glycoprotein; Kinase; Magnesium; Manganese; Membrane; Metal-binding; Nucleotide-binding; Polymorphism; Receptor; Serine/threonine-protein kinase; Signal; Transferase; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    18  18     Potential. 
CHAIN   19   512  494     Activin receptor type-2B. PRO_0000024404
TOPO_DOM   19   137  119     Extracellular (Potential). 
TRANSMEM   138   158  21     Potential. 
TOPO_DOM   159   512  354     Cytoplasmic (Potential). 
DOMAIN   190   480  291     Protein kinase. 
NP_BIND   196   204  9     ATP (By similarity). 
ACT_SITE   321   321        Proton acceptor (By similarity). 
BINDING   217   217        ATP (By similarity). 
CARBOHYD   42    42        N-linked (GlcNAc...) (Potential). 
CARBOHYD   65    65        N-linked (GlcNAc...) (Potential). 
DISULFID   29    59        By similarity. 
DISULFID   49    77        By similarity. 
DISULFID   84   103        By similarity. 
DISULFID   90   102        By similarity. 
DISULFID   104   109        By similarity. 
VARIANT   40    40  1     R -> H (in left-right axis malformations). VAR_013281 
VARIANT   176   176  1     P -> R. VAR_041396 
VARIANT   494   494  1     V -> I (in left-right axis malformations). VAR_013282 
CONFLICT   16    17        CA -> WP (in Ref. 1; CAA54671). 
CONFLICT   64    64        R -> A (in Ref. 1 and 2). 
CONFLICT   459   459        E -> A (in Ref. 3; AAC64515). 
CONFLICT   459   459        E -> D (in Ref. 2; BAA24180). 
STRAND   191   197  7      
STRAND   200   209  10      
STRAND   212   219  8      
HELIX   221   223  3      
HELIX   224   235  12      
STRAND   247   253  7      
TURN   256   258  3      
STRAND   260   266  7      
HELIX   273   279  7      
HELIX   284   302  19      
STRAND   305   308  4      
TURN   309   311  3      
STRAND   312   314  3      
STRAND   316   318  3      
HELIX   324   326  3      
STRAND   327   329  3      
STRAND   335   337  3      
STRAND   344   346  3      
HELIX   362   364  3      
HELIX   367   370  4      
HELIX   378   398  21      
TURN   413   417  5      
HELIX   424   431  8      
HELIX   442   446  5      
HELIX   448   460  13      
HELIX   465   467  3      
HELIX   471   482  12      
Sequence information
Length: 512 AA [This is the length of the unprocessed precursor] Molecular weight: 57724 Da [This is the MW of the unprocessed precursor] CRC64: B377FEF92EF74937 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MTAPWVALAL LWGSLCAGSG RGEAETRECI YYNANWELER TNQSGLERCE GEQDKRLHCY 

        70         80         90        100        110        120 
ASWRNSSGTI ELVKKGCWLD DFNCYDRQEC VATEENPQVY FCCCEGNFCN ERFTHLPEAG 

       130        140        150        160        170        180 
GPEVTYEPPP TAPTLLTVLA YSLLPIGGLS LIVLLAFWMY RHRKPPYGHV DIHEDPGPPP 

       190        200        210        220        230        240 
PSPLVGLKPL QLLEIKARGR FGCVWKAQLM NDFVAVKIFP LQDKQSWQSE REIFSTPGMK 

       250        260        270        280        290        300 
HENLLQFIAA EKRGSNLEVE LWLITAFHDK GSLTDYLKGN IITWNELCHV AETMSRGLSY 

       310        320        330        340        350        360 
LHEDVPWCRG EGHKPSIAHR DFKSKNVLLK SDLTAVLADF GLAVRFEPGK PPGDTHGQVG 

       370        380        390        400        410        420 
TRRYMAPEVL EGAINFQRDA FLRIDMYAMG LVLWELVSRC KAADGPVDEY MLPFEEEIGQ 

       430        440        450        460        470        480 
HPSLEELQEV VVHKKMRPTI KDHWLKHPGL AQLCVTIEEC WDHDAEARLS AGCVEERVSL 

       490        500        510 
IRRSVNGTTS DCLVSLVTSV TNVDLPPKES SI 

Q13705 in FASTA format

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