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UniProtKB/Swiss-Prot entry Q09163


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DLK_MOUSE
Primary accession number Q09163
Secondary accession numbers Q07645 Q62208
Integrated into Swiss-Prot on November 1, 1995
Sequence was last modified on November 1, 1995 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 77)
Name and origin of the protein
Protein name Delta-like protein [Precursor]
Synonyms DLK
Preadipocyte factor 1
Pref-1
Adipocyte differentiation inhibitor protein
Contains Fetal antigen 1
     (FA1)
Gene name
Name: Dlk1
Synonyms: Dlk, Pref1, Scp-1
From
Mus musculus (Mouse) [TaxID: 10090] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=Swiss;
TISSUE=Fibroblast;
PubMed=8095043 [NCBI, ExPASy, EBI, Israel, Japan]
Laborda J., Sausville E.A., Hoffman T., Notario V.;
"dlk, a putative mammalian homeotic gene differentially expressed in small cell lung carcinoma and neuroendocrine tumor cell line.";
J. Biol. Chem. 268:3817-3820(1993).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1016/0092-8674(93)90252-L; PubMed=8500166 [NCBI, ExPASy, EBI, Israel, Japan]
Smas C.M., Sul H.S.;
"Pref-1, a protein containing EGF-like repeats, inhibits adipocyte differentiation.";
Cell 73:725-734(1993).
[3]
NUCLEOTIDE SEQUENCE [MRNA], AND VARIANT LYS-347 DEL.
TISSUE=Adrenal gland, and Placenta;
PubMed=7711066 [NCBI, ExPASy, EBI, Israel, Japan]
Lee Y.L., Helman L., Hoffman T., Laborda J.;
"dlk, pG2 and Pref-1 mRNAs encode similar proteins belonging to the EGF-like superfamily. Identification of polymorphic variants of this RNA.";
Biochim. Biophys. Acta 1261:223-232(1995).
[4]
NUCLEOTIDE SEQUENCE [MRNA].
Maruyama K., Nishijima S., Kuromitsu S., Ichikawa A., Masuda E., Takemoto T., Kodama H., Kawashima H.;
Submitted (AUG-1993) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-8, AND ALTERNATIVE SPLICING.
DOI=10.1021/bi00197a029; PubMed=7519443 [NCBI, ExPASy, EBI, Israel, Japan]
Smas C.M., Green D., Sul H.S.;
"Structural characterization and alternate splicing of the gene encoding the preadipocyte EGF-like protein pref-1.";
Biochemistry 33:9257-9265(1994).
[6]
GLYCOSYLATION AT SER-94; ASN-100; ASN-165; ASN-174; SER-216; THR-224; THR-258; THR-267 AND THR-271, AND STRUCTURE OF CARBOHYDRATE.
PubMed=9118998 [NCBI, ExPASy, EBI, Israel, Japan]
Krogh T.N., Bachmann E., Teisner B., Skjoedt K., Hoejrup P.;
"Glycosylation analysis and protein structure determination of murine fetal antigen 1 (mFA1) -- the circulating gene product of the delta-like protein (dlk), preadipocyte factor 1 (Pref-1) and stromal-cell-derived protein 1 (SCP-1) cDNAs.";
Eur. J. Biochem. 244:334-342(1997).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
Z12171; CAA78162.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U15980; AAB60495.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L12721; AAA37175.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
S71340; -; NOT_ANNOTATED_CDS; Genomic_DNA.[EMBL / GenBank / DDBJ]
D16847; BAA04121.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A54785; A54785.
S53718; S53718.
UniGene Mm.157069
3D structure databases
HSSP P00740; 1EDM. [HSSP ENTRY / PDB]
ModBase Q09163.
Protein-protein interaction databases
DIP DIP:6010N; -.
IntAct Q09163; -.
PTM databases
GlycoSuiteDB Q09163; -.
Organism-specific databases
MGI MGI:94900; Dlk1.
Gene expression databases
ArrayExpress Q09163; -.
CleanEx MM_DLK1; -.
GermOnline ENSMUSG00000040856; Mus musculus.
Ontologies
GO
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
QuickGo view.
Family and domain databases
InterPro IPR006210; EGF.
IPR000152; EGF-type_Asp/Asn_hydroxyl_CS.
IPR001438; EGF_2.
IPR000742; EGF_3.
IPR001881; EGF_Ca_bd.
IPR006209; EGF_like.
IPR013032; EGF_like_reg_CS.
Graphical view of domain structure.
Pfam PF00008; EGF; 5.
Pfam graphical view of domain structure.
PRINTS PR00010; EGFBLOOD.
SMART SM00181; EGF; 5.
SM00179; EGF_CA; 1.
SMART graphical view of domain structure.
PROSITE PS00010; ASX_HYDROXYL; 1.
PS00022; EGF_1; 5.
PS01186; EGF_2; 6.
PS50026; EGF_3; 6.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q09163.
Genome annotation databases
Ensembl ENSMUSG00000040856; Mus musculus. [Contig view]
Phylogenomic databases
HOGENOM Q09163; -.
HOVERGEN Q09163; -.
Other
SOURCE Dlk1; Mus musculus.
ProtoNet Q09163.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Alternative splicing; EGF-like domain; Glycoprotein; Membrane; Repeat; Signal; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    23  23     By similarity. 
CHAIN   24   385  362     Delta-like protein. PRO_0000007520
CHAIN   24   305  282     Fetal antigen 1. PRO_0000007521
TOPO_DOM   24   305  282     Extracellular (Potential). 
TRANSMEM   306   329  24     Potential. 
TOPO_DOM   330   385  56     Cytoplasmic (Potential). 
DOMAIN   24    55  32     EGF-like 1. 
DOMAIN   53    86  34     EGF-like 2. 
DOMAIN   88   125  38     EGF-like 3. 
DOMAIN   127   168  42     EGF-like 4. 
DOMAIN   172   208  37     EGF-like 5. 
DOMAIN   210   247  38     EGF-like 6. 
CARBOHYD   94    94        O-linked (GalNAc...) [GlycoSuiteDB]. CAR_000160
CARBOHYD   100   100        N-linked (GlcNAc...) [GlycoSuiteDB]. CAR_000183
CARBOHYD   165   165        N-linked (GlcNAc...); partial; atypical. 
CARBOHYD   174   174        N-linked (GlcNAc...); atypical. 
CARBOHYD   216   216        O-linked (GalNAc...) [GlycoSuiteDB]. CAR_000161
CARBOHYD   224   224        O-linked (GalNAc...) [GlycoSuiteDB]. CAR_000162
CARBOHYD   258   258        O-linked (GalNAc...). 
CARBOHYD   267   267        O-linked (GalNAc...); partial. 
CARBOHYD   271   271        O-linked (GalNAc...). 
CARBOHYD   295   295        N-linked (GlcNAc...) (Potential). 
DISULFID   26    37        By similarity. 
DISULFID   30    43        By similarity. 
DISULFID   45    54        By similarity. 
DISULFID   57    68        By similarity. 
DISULFID   63    74        By similarity. 
DISULFID   76    85        By similarity. 
DISULFID   92   103        By similarity. 
DISULFID   97   113        By similarity. 
DISULFID   115   124        By similarity. 
DISULFID   131   144        By similarity. 
DISULFID   138   156        By similarity. 
DISULFID   158   167        By similarity. 
DISULFID   176   187        By similarity. 
DISULFID   181   196        By similarity. 
DISULFID   198   207        By similarity. 
DISULFID   214   225        By similarity. 
DISULFID   219   235        By similarity. 
DISULFID   237   246        By similarity. 
VAR_SEQ   211   305        Missing (in isoform D2). VSP_001379
VAR_SEQ   211   303        Missing (in isoform D). VSP_001378
VAR_SEQ   231   305        Missing (in isoform C2). VSP_001382
VAR_SEQ   231   303        Missing (in isoform C). VSP_001381
VAR_SEQ   231   281        Missing (in isoform B). VSP_001380
VARIANT   347   347  1     Missing. 
CONFLICT   250   250        R -> P (in Ref. 2; AAA37175). 
CONFLICT   320   385        VLGTVAIVFLNKCETWVSNLRYNHTFRKKKNLLLQYNSGE ELAVNIIFPEKIDMTTFNKEAGDEEI -> CWAPWPSSFSTSAKPGCPTCATTTCFARRRTSCCSITAAR SWRSISSSPRRLT (in Ref. 2; AAA37175). 
CONFLICT   344   345        TF -> ML (in Ref. 4; BAA04121). 
Sequence information
Length: 385 AA [This is the length of the unprocessed precursor] Molecular weight: 41320 Da [This is the MW of the unprocessed precursor] CRC64: E79864FEA5AF4FF1 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MIATGALLRV LLLLLAFGHS TYGAECDPPC DPQYGFCEAD NVCRCHVGWE GPLCDKCVTA 

        70         80         90        100        110        120 
PGCVNGVCKE PWQCICKDGW DGKFCEIDVR ACTSTPCANN GTCVDLEKGQ YECSCTPGFS 

       130        140        150        160        170        180 
GKDCQHKAGP CVINGSPCQH GGACVDDEGQ ASHASCLCPP GFSGNFCEIV AATNSCTPNP 

       190        200        210        220        230        240 
CENDGVCTDI GGDFRCRCPA GFVDKTCSRP VSNCASGPCQ NGGTCLQHTQ VSFECLCKPP 

       250        260        270        280        290        300 
FMGPTCAKKR GASPVQVTHL PSGYGLTYRL TPGVHELPVQ QPEQHILKVS MKELNKSTPL 

       310        320        330        340        350        360 
LTEGQAICFT ILGVLTSLVV LGTVAIVFLN KCETWVSNLR YNHTFRKKKN LLLQYNSGEE 

       370        380 
LAVNIIFPEK IDMTTFNKEA GDEEI 

Q09163 in FASTA format

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