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UniProtKB/Swiss-Prot entry Q05397


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name FAK1_HUMAN
Primary accession number Q05397
Secondary accession numbers Q14291 Q9UD85
Integrated into Swiss-Prot on February 1, 1994
Sequence was last modified on July 15, 1998 (Sequence version 2)
Annotations were last modified on    June 16, 2009 (Entry version 117)
Name and origin of the protein
Protein name Focal adhesion kinase 1
Synonyms FADK 1
EC 2.7.10.2
pp125FAK
Protein-tyrosine kinase 2
Gene name
Name: PTK2
Synonyms: FAK, FAK1
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
TISSUE=T-cell;
DOI=10.1089/dna.1993.12.823; PubMed=7692878 [NCBI, ExPASy, EBI, Israel, Japan]
Whitney G.S., Chan P.Y., Blake J., Cosand W.L., Neubauer M.G., Aruffo A., Kanner S.B.;
"Human T and B lymphocytes express a structurally conserved focal adhesion kinase, pp125FAK.";
DNA Cell Biol. 12:823-830(1993).
[2]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 2; 3 AND 4).
TISSUE=Brain;
DOI=10.1006/bbrc.1993.1022; PubMed=8422239 [NCBI, ExPASy, EBI, Israel, Japan]
Andre E., Becker-Andre M.;
"Expression of an N-terminally truncated form of human focal adhesion kinase in brain.";
Biochem. Biophys. Res. Commun. 190:140-147(1993).
[3]
PROTEIN SEQUENCE OF 2-19; 192-199; 222-236; 243-252; 350-364; 414-419; 468-476; 562-569; 674-690; 798-811; 832-838; 904-933; 963-981; 989-1000 AND 1003-1042, CLEAVAGE OF INITIATOR METHIONINE, ACETYLATION AT ALA-2, AND MASS SPECTROMETRY.
TISSUE=Osteosarcoma;
Bienvenut W.V., Glen H., Brunton V.G., Frame M.C.;
Submitted (JUL-2007) to UniProtKB.
[4]
NUCLEOTIDE SEQUENCE [MRNA] OF 552-602, AND TISSUE SPECIFICITY.
TISSUE=Melanocyte;
PubMed=8247543 [NCBI, ExPASy, EBI, Israel, Japan]
Lee S.-T., Strunk K.M., Spritz R.A.;
"A survey of protein tyrosine kinase mRNAs expressed in normal human melanocytes.";
Oncogene 8:3403-3410(1993).
[5]
INTERACTION WITH TGFB1I1.
DOI=10.1074/jbc.273.2.1003; PubMed=9422762 [NCBI, ExPASy, EBI, Israel, Japan]
Matsuya M., Sasaki H., Aoto H., Mitaka T., Nagura K., Ohba T., Ishino M., Takahashi S., Suzuki R., Sasaki T.;
"Cell adhesion kinase beta forms a complex with a new member, Hic-5, of proteins localized at focal adhesions.";
J. Biol. Chem. 273:1003-1014(1998).
[6]
INTERACTION WITH TGFB1I1, AND MUTAGENESIS OF VAL-928 AND LEU-1034.
DOI=10.1074/jbc.273.41.26516; PubMed=9756887 [NCBI, ExPASy, EBI, Israel, Japan]
Fujita H., Kamiguchi K., Cho D., Shibanuma M., Morimoto C., Tachibana K.;
"Interaction of Hic-5, A senescence-related protein, with focal adhesion kinase.";
J. Biol. Chem. 273:26516-26521(1998).
[7]
PHOSPHORYLATION AT TYR-397; TYR-407; TYR-577; TYR-861 AND TYR-925.
DOI=10.1042/BJ20020410; PubMed=12387730 [NCBI, ExPASy, EBI, Israel, Japan]
Relou I.A.M., Bax L.A.B., Van Rijn H.J.M., Akkerman J.-W.N.;
"Site-specific phosphorylation of platelet focal adhesion kinase by low-density lipoprotein.";
Biochem. J. 369:407-416(2003).
[8]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-576, AND MASS SPECTROMETRY.
TISSUE=Epithelium;
DOI=10.1074/mcp.M500089-MCP200; PubMed=15951569 [NCBI, ExPASy, EBI, Israel, Japan]
Zhang Y., Wolf-Yadlin A., Ross P.L., Pappin D.J., Rush J., Lauffenburger D.A., White F.M.;
"Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules.";
Mol. Cell. Proteomics 4:1240-1250(2005).
[9]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-397 AND SER-840, AND MASS SPECTROMETRY.
TISSUE=Epithelium;
DOI=10.1016/j.cell.2006.09.026; PubMed=17081983 [NCBI, ExPASy, EBI, Israel, Japan]
Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M.;
"Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.";
Cell 127:635-648(2006).
[10]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-397; TYR-570; TYR-576; TYR-577 AND TYR-861, AND MASS SPECTROMETRY.
DOI=10.1016/j.cell.2007.11.025; PubMed=18083107 [NCBI, ExPASy, EBI, Israel, Japan]
Rikova K., Guo A., Zeng Q., Possemato A., Yu J., Haack H., Nardone J., Lee K., Reeves C., Li Y., Hu Y., Tan Z., Stokes M., Sullivan L., Mitchell J., Wetzel R., Macneill J., Ren J.M., Yuan J., Bakalarski C.E., Villen J., Kornhauser J.M., Smith B., Li D., Zhou X., Gygi S.P., Gu T.-L., Polakiewicz R.D., Rush J., Comb M.J.;
"Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer.";
Cell 131:1190-1203(2007).
[11]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-397; TYR-576; SER-722; SER-840; SER-843 AND SER-910, AND MASS SPECTROMETRY.
DOI=10.1074/mcp.T600062-MCP200; PubMed=17192257 [NCBI, ExPASy, EBI, Israel, Japan]
Wissing J., Jaensch L., Nimtz M., Dieterich G., Hornberger R., Keri G., Wehland J., Daub H.;
"Proteomics analysis of protein kinases by target class-selective prefractionation and tandem mass spectrometry.";
Mol. Cell. Proteomics 6:537-547(2007).
[12]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-13; SER-29; SER-568; TYR-570; SER-722; SER-840; SER-887 AND SER-910, AND MASS SPECTROMETRY.
DOI=10.1016/j.molcel.2008.07.007; PubMed=18691976 [NCBI, ExPASy, EBI, Israel, Japan]
Daub H., Olsen J.V., Bairlein M., Gnad F., Oppermann F.S., Korner R., Greff Z., Keri G., Stemmann O., Mann M.;
"Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle.";
Mol. Cell 31:438-448(2008).
[13]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-910, AND MASS SPECTROMETRY.
DOI=10.1073/pnas.0805139105; PubMed=18669648 [NCBI, ExPASy, EBI, Israel, Japan]
Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P.;
"A quantitative atlas of mitotic phosphorylation.";
Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008).
[14]
IDENTIFICATION [LARGE SCALE ANALYSIS], AND MASS SPECTROMETRY.
Colinge J., Superti-Furga G., Bennett K.L.;
Submitted (OCT-2008) to UniProtKB.
[15]
VARIANTS [LARGE SCALE ANALYSIS] PRO-292; GLN-292; ALA-793; GLU-1030 AND GLU-1044.
DOI=10.1038/nature05610; PubMed=17344846 [NCBI, ExPASy, EBI, Israel, Japan]
Greenman C., Stephens P., Smith R., Dalgliesh G.L., Hunter C., Bignell G., Davies H., Teague J., Butler A., Stevens C., Edkins S., O'Meara S., Vastrik I., Schmidt E.E., Avis T., Barthorpe S., Bhamra G., Buck G., Choudhury B., Clements J., Cole J., Dicks E., Forbes S., Gray K., Halliday K., Harrison R., Hills K., Hinton J., Jenkinson A., Jones D., Menzies A., Mironenko T., Perry J., Raine K., Richardson D., Shepherd R., Small A., Tofts C., Varian J., Webb T., West S., Widaa S., Yates A., Cahill D.P., Louis D.N., Goldstraw P., Nicholson A.G., Brasseur F., Looijenga L., Weber B.L., Chiew Y.-E., DeFazio A., Greaves M.F., Green A.R., Campbell P., Birney E., Easton D.F., Chenevix-Trench G., Tan M.-H., Khoo S.K., Teh B.T., Yuen S.T., Leung S.Y., Wooster R., Futreal P.A., Stratton M.R.;
"Patterns of somatic mutation in human cancer genomes.";
Nature 446:153-158(2007).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
L13616; AAA58469.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L05186; AAA35819.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00012885; -.
IPI00216217; -.
IPI00216218; -.
IPI00789953; -.
PIR I53012; I53012.
PC1225; PC1225.
RefSeq NP_005598.3; -.
NP_722560.1; -.
UniGene Hs.395482
3D structure databases
PDB
1K04; X-ray; 1.95 A; A=891-1052.[ExPASy / RCSB / EBI]
1K05; X-ray; 2.90 A; A/B/C=891-1052.[ExPASy / RCSB / EBI]
1MP8; X-ray; 1.60 A; A=411-686.[ExPASy / RCSB / EBI]
1OW6; X-ray; 2.35 A; A/B/C=892-1052.[ExPASy / RCSB / EBI]
1OW7; X-ray; 2.60 A; A/B/C=892-1052.[ExPASy / RCSB / EBI]
1OW8; X-ray; 2.85 A; A/B/C=892-1052.[ExPASy / RCSB / EBI]
2ETM; X-ray; 2.30 A; A/B=411-689.[ExPASy / RCSB / EBI]
2IJM; X-ray; 2.19 A; A/B=411-689.[ExPASy / RCSB / EBI]
2RA7; X-ray; 1.99 A; A=921-1048.[ExPASy / RCSB / EBI]
3B71; X-ray; 2.82 A; A/B/C=891-1052.[ExPASy / RCSB / EBI]
3BZ3; X-ray; 2.20 A; A=414-689.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1K04; -.
1K05; -.
1MP8; -.
1OW6; -.
1OW7; -.
1OW8; -.
2ETM; -.
2IJM; -.
2RA7; -.
3B71; -.
3BZ3; -.
SMR Q05397; 33-383.
ModBase Q05397.
Protein-protein interaction databases
IntAct Q05397; 13.
PTM databases
PhosphoSite Q05397; -.
Enzyme and pathway databases
BRENDA 2.7.10.2; 247.
Pathway_Interaction_DB angiopoietinreceptor_pathway; Angiopoietin receptor Tie2-mediated signaling.
caspase_pathway; Caspase cascade in apoptosis.
epha2_fwdpathway; EPHA2 forward signaling.
ephbfwdpathway; EPHB forward signaling.
fcer1pathway; Fc-epsilon receptor I signaling in mast cells.
igf1_pathway; IGF1 pathway.
avb3_integrin_pathway; Integrins in angiogenesis.
lysophospholipid_pathway; LPA receptor mediated events.
a4b1_paxindep_pathway; Paxillin-independent events mediated by a4b1 and a4b7.
met_pathway; Signaling events activated by Hepatocyte Growth Factor Receptor (c-Met).
vegfr1_2_pathway; Signaling events mediated by VEGFR1 and VEGFR2.
ret_pathway; Signaling events regulated by Ret tyrosine kinase.
syndecan_4_pathway; Syndecan-4-mediated signaling events.
Reactome REACT_578; Apoptosis.
Organism-specific databases
GeneCards GC08M141737; -.
H-InvDB HIX0020601; -.
HGNC HGNC:9611; PTK2.
GenAtlas PTK2.
HPA CAB004036; -.
HPA001842; -.
MIM 600758; gene. [NCBI / EBI]
PharmGKB PA33955; -.
Gene expression databases
ArrayExpress Q05397; -.
Bgee Q05397; -.
CleanEx HS_PTK2; -.
GermOnline ENSG00000169398; Homo sapiens.
Ontologies
GO
GO:0005856; Cellular component: cytoskeleton (traceable author statement from ProtInc).
GO:0005829; Cellular component: cytosol (inferred from experiment from Reactome).
GO:0005925; Cellular component: focal adhesion (inferred from direct assay from HPA).
GO:0005524; Molecular function: ATP binding (inferred from electronic annotation from UniProtKB-KW).
GO:0004715; Molecular function: non-membrane spanning protein tyrosine kinase activity (inferred from electronic annotation from EC).
GO:0042169; Molecular function: SH2 domain binding (inferred from physical interaction from UniProtKB).
GO:0004871; Molecular function: signal transducer activity (inferred from electronic annotation from InterPro).
GO:0007229; Biological process: integrin-mediated signaling pathway (traceable author statement from ProtInc).
GO:0006468; Biological process: protein amino acid phosphorylation (inferred by curator from ProtInc).
GO:0007172; Biological process: signal complex assembly (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR019749; Band_41_domain.
IPR019748; FERM_central.
IPR019747; FERM_CS.
IPR000299; FERM_domain.
IPR005189; Focal_adhesion_target_reg.
IPR000719; Prot_kinase_core.
IPR017441; Protein_kinase_ATP_BS.
IPR001245; Tyr_pkinase.
IPR008266; Tyr_pkinase_AS.
Graphical view of domain structure.
Pfam PF00373; FERM_M; 1.
PF03623; Focal_AT; 1.
PF07714; Pkinase_Tyr; 1.
Pfam graphical view of domain structure.
PRINTS PR00109; TYRKINASE.
ProDom PD000001; Prot_kinase; 1.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00295; B41; 1.
SM00219; TyrKc; 1.
SMART graphical view of domain structure.
PROSITE PS00660; FERM_1; FALSE_NEG.
PS00661; FERM_2; 1.
PS50057; FERM_3; 1.
PS00107; PROTEIN_KINASE_ATP; 1.
PS50011; PROTEIN_KINASE_DOM; 1.
PS00109; PROTEIN_KINASE_TYR; 1.
PROSITE graphical view of domain structure (profiles).
Proteomic databases
PRIDE Q05397; -.
Genome annotation databases
Ensembl ENSG00000169398; Homo sapiens. [Contig view]
GeneID 5747; -.
KEGG hsa:5747; -.
Phylogenomic databases
HOVERGEN Q05397; -.
Other
NextBio 22380; -.
PMAP-CutDB Q05397; -.
SOURCE PTK2; Homo sapiens.
ProtoNet Q05397.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Acetylation; Alternative splicing; ATP-binding; Cell junction; Cell membrane; Direct protein sequencing; Kinase; Membrane; Nucleotide-binding; Phosphoprotein; Polymorphism; Transferase; Tyrosine-protein kinase.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom    To Length Description FTId
INIT_MET   1      1        Removed. 
CHAIN   2   1052  1051     Focal adhesion kinase 1. PRO_0000088077
DOMAIN   35    355  321     FERM. 
DOMAIN   422    680  259     Protein kinase. 
NP_BIND   428    436  9     ATP (By similarity). 
REGION   707   1052  346     Interaction with TGFB1I1. 
REGION   912   1052  141     Interaction with RGNEF (By similarity). 
COMPBIAS   712    733  22     Pro-rich. 
COMPBIAS   863    913  51     Pro-rich. 
ACT_SITE   546    546        Proton acceptor (By similarity). 
BINDING   454    454        ATP (By similarity). 
MOD_RES   2      2        N-acetylalanine. 
MOD_RES   13     13        Phosphothreonine. 
MOD_RES   29     29        Phosphoserine. 
MOD_RES   397    397        Phosphotyrosine. 
MOD_RES   407    407        Phosphotyrosine. 
MOD_RES   568    568        Phosphoserine. 
MOD_RES   570    570        Phosphotyrosine. 
MOD_RES   576    576        Phosphotyrosine; by autocatalysis. 
MOD_RES   577    577        Phosphotyrosine; by autocatalysis. 
MOD_RES   722    722        Phosphoserine. 
MOD_RES   840    840        Phosphoserine. 
MOD_RES   843    843        Phosphoserine. 
MOD_RES   861    861        Phosphotyrosine. 
MOD_RES   887    887        Phosphoserine. 
MOD_RES   910    910        Phosphoserine. 
MOD_RES   925    925        Phosphotyrosine. 
VAR_SEQ   1    181        Missing (in isoform 2, isoform 3 and isoform 4). VSP_004967
VAR_SEQ   182    189        EMRGNALE -> MSDYWVVG (in isoform 2, isoform 3 and isoform 4). VSP_004968
VAR_SEQ   472    472        A -> ACHYTSLHWNWCRYISDPNVDACPDPRNAE (in isoform 2, isoform 3 and isoform 4). VSP_004969
VAR_SEQ   579    583        ASKGK -> GKKSG (in isoform 4). VSP_004971
VAR_SEQ   584   1052        Missing (in isoform 4). VSP_004972
VAR_SEQ   677    706        STILEEEKAQQEERMRMESRRQATVSWDSG -> FQNPAQMLPASGRLPNQPCPERENYSFATF (in isoform 3). VSP_004973
VAR_SEQ   707   1052        Missing (in isoform 3). VSP_004974
VAR_SEQ   834    854        Missing (in isoform 2). VSP_004970
VARIANT   292    292  1     H -> P. VAR_041682 
VARIANT   292    292  1     H -> Q. VAR_041683 
VARIANT   793    793  1     V -> A (in a glioblastoma multiforme sample; somatic mutation). VAR_041684 
VARIANT   1030   1030  1     D -> E. VAR_041685 [3D]
VARIANT   1044   1044  1     K -> E (in a metastatic melanoma sample; somatic mutation). VAR_041686 [3D]
MUTAGEN   928    928        V->G: Loss of interaction with TGFB1I1. 
MUTAGEN   1034   1034        L->S: Loss of interaction with TGFB1I1. 
CONFLICT   778    778        P -> S (in Ref. 2; AAA35819). 
HELIX   419    421  3      
STRAND   422    430  9      
STRAND   432    441  10      
STRAND   449    455  7      
TURN   457    460  4      
HELIX   462    476  15      
STRAND   486    490  5      
STRAND   492    494  3      
STRAND   496    500  5      
HELIX   507    513  7      
TURN   514    517  4      
HELIX   520    539  20      
HELIX   549    551  3      
STRAND   552    556  5      
STRAND   559    562  4      
HELIX   586    588  3      
HELIX   591    596  6      
HELIX   601    616  16      
TURN   622    625  4      
HELIX   628    630  3      
HELIX   631    636  6      
HELIX   649    658  10      
HELIX   663    665  3      
HELIX   669    685  17      
STRAND   915    917  3      
HELIX   923    942  20      
HELIX   947    949  3      
HELIX   950    971  22      
HELIX   972    974  3      
HELIX   977    979  3      
HELIX   980   1006  27      
TURN   1007   1009  3      
STRAND   1010   1012  3      
HELIX   1013   1045  33      
Sequence information
Length: 1052 AA [This is the length of the unprocessed precursor] Molecular weight: 119233 Da [This is the MW of the unprocessed precursor] CRC64: D8A4C15138AB0243 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAAAYLDPNL NHTPNSSTKT HLGTGMERSP GAMERVLKVF HYFESNSEPT TWASIIRHGD 

        70         80         90        100        110        120 
ATDVRGIIQK IVDSHKVKHV ACYGFRLSHL RSEEVHWLHV DMGVSSVREK YELAHPPEEW 

       130        140        150        160        170        180 
KYELRIRYLP KGFLNQFTED KPTLNFFYQQ VKSDYMLEIA DQVDQEIALK LGCLEIRRSY 

       190        200        210        220        230        240 
WEMRGNALEK KSNYEVLEKD VGLKRFFPKS LLDSVKAKTL RKLIQQTFRQ FANLNREESI 

       250        260        270        280        290        300 
LKFFEILSPV YRFDKECFKC ALGSSWIISV ELAIGPEEGI SYLTDKGCNP THLADFTQVQ 

       310        320        330        340        350        360 
TIQYSNSEDK DRKGMLQLKI AGAPEPLTVT APSLTIAENM ADLIDGYCRL VNGTSQSFII 

       370        380        390        400        410        420 
RPQKEGERAL PSIPKLANSE KQGMRTHAVS VSETDDYAEI IDEEDTYTMP STRDYEIQRE 

       430        440        450        460        470        480 
RIELGRCIGE GQFGDVHQGI YMSPENPALA VAIKTCKNCT SDSVREKFLQ EALTMRQFDH 

       490        500        510        520        530        540 
PHIVKLIGVI TENPVWIIME LCTLGELRSF LQVRKYSLDL ASLILYAYQL STALAYLESK 

       550        560        570        580        590        600 
RFVHRDIAAR NVLVSSNDCV KLGDFGLSRY MEDSTYYKAS KGKLPIKWMA PESINFRRFT 

       610        620        630        640        650        660 
SASDVWMFGV CMWEILMHGV KPFQGVKNND VIGRIENGER LPMPPNCPPT LYSLMTKCWA 

       670        680        690        700        710        720 
YDPSRRPRFT ELKAQLSTIL EEEKAQQEER MRMESRRQAT VSWDSGGSDE APPKPSRPGY 

       730        740        750        760        770        780 
PSPRSSEGFY PSPQHMVQTN HYQVSGYPGS HGITAMAGSI YPGQASLLDQ TDSWNHRPQE 

       790        800        810        820        830        840 
IAMWQPNVED STVLDLRGIG QVLPTHLMEE RLIRQQQEME EDQRWLEKEE RFLKPDVRLS 

       850        860        870        880        890        900 
RGSIDREDGS LQGPIGNQHI YQPVGKPDPA APPKKPPRPG APGHLGSLAS LSSPADSYNE 

       910        920        930        940        950        960 
GVKLQPQEIS PPPTANLDRS NDKVYENVTG LVKAVIEMSS KIQPAPPEEY VPMVKEVGLA 

       970        980        990       1000       1010       1020 
LRTLLATVDE TIPLLPASTH REIEMAQKLL NSDLGELINK MKLAQQYVMT SLQQEYKKQM 

      1030       1040       1050 
LTAAHALAVD AKNLLDVIDQ ARLKMLGQTR PH 

Q05397 in FASTA format

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