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UniProtKB/Swiss-Prot entry Q02567


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PEM1_PHACH
Primary accession number Q02567
Secondary accession number Q01788
Integrated into Swiss-Prot on February 21, 2001
Sequence was last modified on November 1, 1996 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 80)
Name and origin of the protein
Protein name Peroxidase manganese-dependent 1 [Precursor]
Synonyms EC 1.11.1.13
Peroxidase manganese-dependent I
Manganese peroxidase isozyme 1
MnP-1
MnP1
Gene name
Name: MNP1
From
Phanerochaete chrysosporium (White-rot fungus) (Sporotrichum pruinosum) [TaxID: 5306] 
Taxonomy Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Corticiales; Corticiaceae; Phanerochaete.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=ATCC 201542 / OGC101;
DOI=10.1016/0378-1119(90)90144-G; PubMed=2227420 [NCBI, ExPASy, EBI, Israel, Japan]
Godfrey B.J., Mayfield M.B., Brown J.A., Gold M.H.;
"Characterization of a gene encoding a manganese peroxidase from Phanerochaete chrysosporium.";
Gene 93:119-124(1990).
[2]
NUCLEOTIDE SEQUENCE [MRNA], AND PROTEIN SEQUENCE OF 22-41.
STRAIN=ATCC 201542 / OGC101;
PubMed=2925681 [NCBI, ExPASy, EBI, Israel, Japan]
Pribnow D., Mayfield M.B., Nipper V.J., Brown J.A., Gold M.H.;
"Characterization of a cDNA encoding a manganese peroxidase, from the lignin-degrading basidiomycete Phanerochaete chrysosporium.";
J. Biol. Chem. 264:5036-5040(1989).
[3]
METAL-BINDING.
DOI=10.1021/bi960679c; PubMed=8688436 [NCBI, ExPASy, EBI, Israel, Japan]
Kishi K., Kusters-van Someren M., Mayfield M.B., Sun J., Loehr T.M., Gold M.H.;
"Characterization of manganese(II) binding site mutants of manganese peroxidase.";
Biochemistry 35:8986-8994(1996).
[4]
X-RAY CRYSTALLOGRAPHY (2.06 ANGSTROMS).
PubMed=7806497 [NCBI, ExPASy, EBI, Israel, Japan]
Sundaramoorthy M., Kishi K., Gold M.H., Poulos T.L.;
"The crystal structure of manganese peroxidase from Phanerochaete chrysosporium at 2.06-A resolution.";
J. Biol. Chem. 269:32759-32767(1994).
[5]
X-RAY CRYSTALLOGRAPHY (2.0 ANGSTROMS) OF MUTANTS.
DOI=10.1074/jbc.272.28.17574; PubMed=9211904 [NCBI, ExPASy, EBI, Israel, Japan]
Sundaramoorthy M., Kishi K., Gold M.H., Poulos T.L.;
"Crystal structures of substrate binding site mutants of manganese peroxidase.";
J. Biol. Chem. 272:17574-17580(1997).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M60672; AAA33744.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M77513; AAA33743.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
J04624; AAA33742.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR JN0092; A33271.
3D structure databases
PDB
1MN1; X-ray; 2.00 A; A=22-378.[ExPASy / RCSB / EBI]
1MN2; X-ray; 2.00 A; A=22-378.[ExPASy / RCSB / EBI]
1MNP; X-ray; 2.00 A; A=22-378.[ExPASy / RCSB / EBI]
1YYD; X-ray; 1.45 A; A=22-378.[ExPASy / RCSB / EBI]
1YYG; X-ray; 1.60 A; A=22-378.[ExPASy / RCSB / EBI]
1YZP; X-ray; 1.60 A; A=22-378.[ExPASy / RCSB / EBI]
1YZR; X-ray; 1.60 A; A=22-378.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1MN1; -.
1MN2; -.
1MNP; -.
1YYD; -.
1YYG; -.
1YZP; -.
1YZR; -.
ModBase Q02567.
Protein family/group databases
PeroxiBase 3866; PcMnP01_OGC101.
Ontologies
GO
GO:0005576; Cellular component: extracellular region (inferred from electronic annotation from UniProtKB-KW).
GO:0005509; Molecular function: calcium ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0020037; Molecular function: heme binding (inferred from electronic annotation from InterPro).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0030145; Molecular function: manganese ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0016689; Molecular function: manganese peroxidase activity (inferred from electronic annotation from EC).
GO:0042744; Biological process: hydrogen peroxide catabolic process (inferred from electronic annotation from UniProtKB-KW).
GO:0046274; Biological process: lignin catabolic process (inferred from electronic annotation from UniProtKB-KW).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR002016; Haem_peroxidase_pln/fun/bac.
IPR001621; Ligninase.
Graphical view of domain structure.
Pfam PF00141; peroxidase; 1.
Pfam graphical view of domain structure.
PRINTS PR00462; LIGNINASE.
PR00458; PEROXIDASE.
PROSITE PS00435; PEROXIDASE_1; 1.
PS00436; PEROXIDASE_2; 1.
PS50873; PEROXIDASE_4; 1.
PROSITE graphical view of domain structure (profiles).
ProtoNet Q02567.
Other
LinkHub Q02567; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Calcium; Direct protein sequencing; Glycoprotein; Heme; Hydrogen peroxide; Iron; Lignin degradation; Manganese; Metal-binding; Oxidoreductase; Peroxidase; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
SIGNAL   1    21  21      
CHAIN   22   378  357     Peroxidase manganese-dependent 1. PRO_0000023778
ACT_SITE   67    67        Proton acceptor. 
METAL   56    56        Manganese. 
METAL   60    60        Manganese. 
METAL   68    68        Calcium 1. 
METAL   83    83        Calcium 1; via carbonyl oxygen. 
METAL   85    85        Calcium 1. 
METAL   87    87        Calcium 1. 
METAL   194   194        Iron (heme axial ligand). 
METAL   195   195        Calcium 2. 
METAL   200   200        Manganese. 
METAL   212   212        Calcium 2. 
METAL   214   214        Calcium 2. 
METAL   217   217        Calcium 2; via carbonyl oxygen. 
METAL   219   219        Calcium 2. 
SITE   63    63  1     Transition state stabilizer. 
CARBOHYD   97    97        N-linked (GlcNAc...) (Potential). 
CARBOHYD   152   152        N-linked (GlcNAc...). 
CARBOHYD   238   238        N-linked (GlcNAc...) (Potential). 
DISULFID   24    36         
DISULFID   35   310         
DISULFID   54   138         
DISULFID   274   340         
DISULFID   362   369         
CONFLICT   75    75        S -> L (in Ref. 2; AAA33742). 
HELIX   33    37  5      
HELIX   38    48  11      
TURN   49    52  4      
STRAND   53    55  3      
HELIX   56    70  15      
TURN   74    76  3      
HELIX   78    80  3      
STRAND   83    85  3      
HELIX   87    90  4      
TURN   92    94  3      
HELIX   95    97  3      
HELIX   99   101  3      
TURN   102   104  3      
HELIX   105   117  13      
HELIX   123   136  14      
HELIX   169   180  12      
HELIX   184   190  7      
HELIX   191   196  6      
STRAND   198   203  6      
STRAND   209   213  5      
HELIX   221   226  6      
HELIX   261   268  8      
TURN   270   272  3      
HELIX   273   278  6      
TURN   279   281  3      
HELIX   283   297  15      
TURN   298   301  4      
HELIX   304   306  3      
STRAND   307   309  3      
HELIX   311   313  3      
HELIX   333   335  3      
Sequence information
Length: 378 AA [This is the length of the unprocessed precursor] Molecular weight: 39557 Da [This is the MW of the unprocessed precursor] CRC64: 17A9A8F642441F27 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAFKSLIAFV ALAAAVRAAP TAVCPDGTRV SHAACCAFIP LAQDLQETIF QNECGEDAHE 

        70         80         90        100        110        120 
VIRLTFHDAI AISRSQGPKA GGGADGSMLL FPTVEPNFSA NNGIDDSVNN LIPFMQKHNT 

       130        140        150        160        170        180 
ISAADLVQFA GAVALSNCPG APRLEFLAGR PNKTIAAVDG LIPEPQDSVT KILQRFEDAG 

       190        200        210        220        230        240 
GFTPFEVVSL LASHSVARAD KVDQTIDAAP FDSTPFTFDT QVFLEVLLKG VGFPGSANNT 

       250        260        270        280        290        300 
GEVASPLPLG SGSDTGEMRL QSDFALAHDP RTACIWQGFV NEQAFMAASF RAAMSKLAVL 

       310        320        330        340        350        360 
GHNRNSLIDC SDVVPVPKPA TGQPAMFPAS TGPQDLELSC PSERFPTLTT QPGASQSLIA 

       370 
HCPDGSMSCP GVQFNGPA 

Q02567 in FASTA format

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