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UniProtKB/Swiss-Prot entry Q00987


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name MDM2_HUMAN
Primary accession number Q00987
Secondary accession numbers Q13226 Q13297 Q13298 Q13299 Q13300 Q13301 Q53XW0 Q71TW9 Q8WYJ1 Q8WYJ2 Q9UGI3 Q9UMT8
Integrated into Swiss-Prot on April 1, 1993
Sequence was last modified on April 1, 1993 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 117)
Name and origin of the protein
Protein name E3 ubiquitin-protein ligase Mdm2
Synonyms EC 6.3.2.-
p53-binding protein Mdm2
Oncoprotein Mdm2
Double minute 2 protein
Hdm2
Gene name
Name: MDM2
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM MDM2).
TISSUE=Colon;
DOI=10.1038/358080a0; PubMed=1614537 [NCBI, ExPASy, EBI, Israel, Japan]
Oliner J.D., Kinzler K.W., Meltzer P.S., George D.L., Vogelstein B.;
"Amplification of a gene encoding a p53-associated protein in human sarcomas.";
Nature 358:80-83(1992).
[2]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS MDM2-A; -B; -C; -D AND -E).
TISSUE=Ovarian carcinoma;
DOI=10.1038/nm0896-912; PubMed=8705862 [NCBI, ExPASy, EBI, Israel, Japan]
Sigalas I., Calvert A.H., Anderson J.J., Neal D.E., Lunec J.;
"Alternatively spliced mdm2 transcripts with loss of p53 binding domain sequences: transforming ability and frequent detection in human cancer.";
Nat. Med. 2:912-917(1996).
[3]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM MDM2-ALPHA).
DOI=10.1038/sj.onc.1203182; PubMed=10597303 [NCBI, ExPASy, EBI, Israel, Japan]
Veldhoen N., Metcalfe S., Milner J.;
"A novel exon within the mdm2 gene modulates translation initiation in vitro and disrupts the p53-binding domain of mdm2 protein.";
Oncogene 18:7026-7033(1999).
[4]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS MDM2-F AND -G), AND INTERACTION WITH TP53.
DOI=10.1002/ijc.1271; PubMed=11351297 [NCBI, ExPASy, EBI, Israel, Japan]
Tamborini E., Della Torre G., Lavarino C., Azzarelli A., Carpinelli P., Pierotti M.A., Pilotti S.;
"Analysis of the molecular species generated by MDM2 gene amplification in liposarcomas.";
Int. J. Cancer 92:790-796(2001).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM MDM2).
Kalnine N., Chen X., Rolfs A., Halleck A., Hines L., Eisenstein S., Koundinya M., Raphael J., Moreira D., Kelley T., LaBaer J., Lin Y., Phelan M., Farmer A.;
"Cloning of human full-length CDSs in BD Creator(TM) system donor vector.";
Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases.
[6]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Rieder M.J., Livingston R.J., Braun A.C., Montoya M.A., Chung M.-W., Miyamoto K.E., Nguyen C.P., Nguyen D.A., Poel C.L., Robertson P.D., Schackwitz W.S., Sherwood J.K., Witrak L.A., Nickerson D.A.;
"NIEHS-SNPs, environmental genome project, NIEHS ES15478, Department of Genome Sciences, Seattle, WA (URL: http://egp.gs.washington.edu).";
Submitted (JUL-2002) to the EMBL/GenBank/DDBJ databases.
[7]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-24.
DOI=10.1093/nar/23.14.2584; PubMed=7651818 [NCBI, ExPASy, EBI, Israel, Japan]
Zauberman A., Flusberg D., Haupt Y., Barak Y., Oren M.;
"A functional p53-responsive intronic promoter is contained within the human mdm2 gene.";
Nucleic Acids Res. 23:2584-2592(1995).
[8]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-9.
PubMed=9270029 [NCBI, ExPASy, EBI, Israel, Japan]
Landers J.E., Cassel S.L., George D.L.;
"Translational enhancement of mdm2 oncogene expression in human tumor cells containing a stabilized wild-type p53 protein.";
Cancer Res. 57:3562-3568(1997).
[9]
NUCLEOTIDE SEQUENCE [MRNA] OF 6-491 (ISOFORM MDM2-A1).
DOI=10.1016/j.gene.2004.05.015; PubMed=15315825 [NCBI, ExPASy, EBI, Israel, Japan]
Liang H., Atkins H., Abdel-Fattah R., Jones S.N., Lunec J.;
"Genomic organisation of the human MDM2 oncogene and relationship to its alternatively spliced mRNAs.";
Gene 338:217-223(2004).
[10]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 301-481.
DOI=10.1016/S0027-5107(00)00112-3; PubMed=11087894 [NCBI, ExPASy, EBI, Israel, Japan]
Taubert H., Kappler M., Meye A., Bartel F., Schlott T., Lautenschlaeger C., Bache M., Schmidt H., Wuerl P.;
"A MboII polymorphism in exon 11 of the human MDM2 gene occuring in normal blood donors and in soft tissue sarcoma patients: an indication for an increased cancer susceptibility?";
Mutat. Res. 456:39-44(2000).
[11]
SUBCELLULAR LOCATION, AND INTERACTION WITH TP53.
PubMed=7689721 [NCBI, ExPASy, EBI, Israel, Japan]
Olson D.C., Marechal V., Momand J., Chen J., Romocki C., Levine A.J.;
"Identification and characterization of multiple mdm-2 proteins and mdm-2-p53 protein complexes.";
Oncogene 8:2353-2360(1993).
[12]
MUTAGENESIS OF CYS-464.
DOI=10.1016/S0014-5793(97)01480-4; PubMed=9450543 [NCBI, ExPASy, EBI, Israel, Japan]
Honda R., Tanaka H., Yasuda H.;
"Oncoprotein MDM2 is a ubiquitin ligase E3 for tumor suppressor p53.";
FEBS Lett. 420:25-27(1997).
[13]
MUTAGENESIS OF CYS-441 AND CYS-478.
DOI=10.1074/jbc.274.53.38189; PubMed=10608892 [NCBI, ExPASy, EBI, Israel, Japan]
Sharp D.A., Kratowicz S.A., Sank M.J., George D.L.;
"Stabilization of the MDM2 oncoprotein by interaction with the structurally related MDMX protein.";
J. Biol. Chem. 274:38189-38196(1999).
[14]
PHOSPHORYLATION BY ATM.
DOI=10.1073/pnas.96.26.14973; PubMed=10611322 [NCBI, ExPASy, EBI, Israel, Japan]
Khosravi R., Maya R., Gottlieb T., Oren M., Shiloh Y., Shkedy D.;
"Rapid ATM-dependent phosphorylation of MDM2 precedes p53 accumulation in response to DNA damage.";
Proc. Natl. Acad. Sci. U.S.A. 96:14973-14977(1999).
[15]
MUTAGENESIS.
DOI=10.1074/jbc.275.12.8945; PubMed=10722742 [NCBI, ExPASy, EBI, Israel, Japan]
Fang S., Jensen J.P., Ludwig R.L., Vousden K.H., Weissman A.M.;
"Mdm2 is a RING finger-dependent ubiquitin protein ligase for itself and p53.";
J. Biol. Chem. 275:8945-8951(2000).
[16]
NUCLEOLAR LOCALIZATION SIGNAL.
DOI=10.1038/35004057; PubMed=10707090 [NCBI, ExPASy, EBI, Israel, Japan]
Lohrum M.A.E., Ashcroft M., Kubbutat M.H.G., Vousden K.H.;
"Identification of a cryptic nucleolar-localization signal in MDM2.";
Nat. Cell Biol. 2:179-181(2000).
[17]
MUTAGENESIS OF CYS-449.
DOI=10.1038/sj.onc.1203464; PubMed=10723139 [NCBI, ExPASy, EBI, Israel, Japan]
Honda R., Yasuda H.;
"Activity of MDM2, a ubiquitin ligase, toward p53 or itself is dependent on the RING finger domain of the ligase.";
Oncogene 19:1473-1476(2000).
[18]
INTERACTION WITH HIV-1 TAT.
DOI=10.1038/ncb1023; PubMed=12883554 [NCBI, ExPASy, EBI, Israel, Japan]
Bres V., Kiernan R.E., Linares L.K., Chable-Bessia C., Plechakova O., Treand C., Emiliani S., Peloponese J.-M., Jeang K.-T., Coux O., Scheffner M., Benkirane M.;
"A non-proteolytic role for ubiquitin in Tat-mediated transactivation of the HIV-1 promoter.";
Nat. Cell Biol. 5:754-761(2003).
[19]
INTERACTION WITH WWOX AND TP53.
DOI=10.1074/jbc.M505590200; PubMed=16219768 [NCBI, ExPASy, EBI, Israel, Japan]
Chang N.-S., Doherty J., Ensign A., Schultz L., Hsu L.-J., Hong Q.;
"WOX1 is essential for tumor necrosis factor-, UV light-, staurosporine-, and p53-mediated cell death, and its tyrosine 33-phosphorylated form binds and stabilizes serine 46-phosphorylated p53.";
J. Biol. Chem. 280:43100-43108(2005).
[20]
FUNCTION, INTERACTION WITH MTBP, AND MUTAGENESIS OF CYS-464.
DOI=10.1128/MCB.25.2.545-553.2005; PubMed=15632057 [NCBI, ExPASy, EBI, Israel, Japan]
Brady M., Vlatkovic N., Boyd M.T.;
"Regulation of p53 and MDM2 activity by MTBP.";
Mol. Cell. Biol. 25:545-553(2005).
[21]
UBIQUITINATION, INTERACTION WITH PYHIN1, AND MUTAGENESIS OF CYS-464.
DOI=10.1128/MCB.26.5.1979-1996.2006; PubMed=16479015 [NCBI, ExPASy, EBI, Israel, Japan]
Ding Y., Lee J.-F., Lu H., Lee M.-H., Yan D.-H.;
"Interferon-inducible protein IFIXalpha1 functions as a negative regulator of HDM2.";
Mol. Cell. Biol. 26:1979-1996(2006).
[22]
INTERACTION WITH CDKN2AIP.
DOI=10.1196/annals.1395.033; PubMed=17460193 [NCBI, ExPASy, EBI, Israel, Japan]
Kamrul H.M., Wadhwa R., Kaul S.C.;
"CARF binds to three members (ARF, p53, and HDM2) of the p53 tumor-suppressor pathway.";
Ann. N. Y. Acad. Sci. 1100:312-315(2007).
[23]
INTERACTION WITH TBRG1.
DOI=10.1074/jbc.M609612200; PubMed=17110379 [NCBI, ExPASy, EBI, Israel, Japan]
Tompkins V.S., Hagen J., Frazier A.A., Lushnikova T., Fitzgerald M.P., di Tommaso A.D., Ladeveze V., Domann F.E., Eischen C.M., Quelle D.E.;
"A novel nuclear interactor of ARF and MDM2 (NIAM) that maintains chromosomal stability.";
J. Biol. Chem. 282:1322-1333(2007).
[24]
X-RAY CRYSTALLOGRAPHY (2.6 ANGSTROMS) OF 25-109 IN COMPLEX WITH P53.
DOI=10.1126/science.274.5289.948; PubMed=8875929 [NCBI, ExPASy, EBI, Israel, Japan]
Kussie P.H., Gorina S., Marechal V., Elenbaas B., Moreau J., Levine A.J., Pavletich N.P.;
"Structure of the MDM2 oncoprotein bound to the p53 tumor suppressor transactivation domain.";
Science 274:948-953(1996).
[25]
X-RAY CRYSTALLOGRAPHY (1.65 ANGSTROMS) OF 224-232 IN COMPLEX WITH USP7, AND INTERACTION WITH USP7.
DOI=10.1371/journal.pbio.0040027; PubMed=16402859 [NCBI, ExPASy, EBI, Israel, Japan]
Hu M., Gu L., Li M., Jeffrey P.D., Gu W., Shi Y.;
"Structural basis of competitive recognition of p53 and MDM2 by HAUSP/USP7: implications for the regulation of the p53-MDM2 pathway.";
PLoS Biol. 4:228-239(2006).
[26]
X-RAY CRYSTALLOGRAPHY (1.6 ANGSTROMS) OF 145-150 IN COMPLEX WITH USP7, AND INTERACTION WITH USP7.
DOI=10.1038/nsmb1067; PubMed=16474402 [NCBI, ExPASy, EBI, Israel, Japan]
Sheng Y., Saridakis V., Sarkari F., Duan S., Wu T., Arrowsmith C.H., Frappier L.;
"Molecular recognition of p53 and MDM2 by USP7/HAUSP.";
Nat. Struct. Mol. Biol. 13:285-291(2006).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M92424; AAA60568.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Z12020; CAA78055.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U33199; AAA75514.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U33200; AAA75515.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U33201; AAA75516.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U33202; AAA75517.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U33203; AAA75518.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF092844; AAL40179.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF092845; AAL40180.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BT007258; AAP35922.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF527840; AAM78554.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U28935; AAA82237.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U39736; AAA82061.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF201370; AAF42995.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ251943; CAB64448.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S24354; S24354.
RefSeq NP_002383.2; -.
NP_006869.3; -.
NP_006870.3; -.
NP_006872.3; -.
NP_006873.3; -.
UniGene Hs.567303
3D structure databases
PDB
1RV1; X-ray; 2.30 A; A/B/C=25-109.[ExPASy / RCSB / EBI]
1T4E; X-ray; 2.60 A; A/B=17-111.[ExPASy / RCSB / EBI]
1T4F; X-ray; 1.90 A; M=17-125.[ExPASy / RCSB / EBI]
1YCR; X-ray; 2.60 A; A=17-125.[ExPASy / RCSB / EBI]
1Z1M; NMR; -; A=1-118.[ExPASy / RCSB / EBI]
2AXI; X-ray; 1.40 A; A=17-125.[ExPASy / RCSB / EBI]
2C6A; NMR; -; A=290-335.[ExPASy / RCSB / EBI]
2C6B; NMR; -; A=290-335.[ExPASy / RCSB / EBI]
2F1Y; X-ray; 1.70 A; A=-.[ExPASy / RCSB / EBI]
2FOP; X-ray; 2.10 A; B=145-150.[ExPASy / RCSB / EBI]
2GV2; X-ray; 1.80 A; A=17-125.[ExPASy / RCSB / EBI]
2HDP; NMR; -; A/B=429-491.[ExPASy / RCSB / EBI]
2VJE; X-ray; 2.20 A; A/C=428-491.[ExPASy / RCSB / EBI]
2VJF; X-ray; 2.30 A; A/C=428-491.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1RV1; -.
1T4E; -.
1T4F; -.
1YCR; -.
1Z1M; -.
2AXI; -.
2C6A; -.
2C6B; -.
2F1Y; -.
2FOP; -.
2GV2; -.
2HDP; -.
2VJE; -.
2VJF; -.
DisProt DP00334; -.
ModBase Q00987.
Protein-protein interaction databases
DIP DIP:24224N; -.
IntAct Q00987; -.
PTM databases
PhosphoSite Q00987; -.
Enzyme and pathway databases
Reactome REACT_1538; Cell Cycle Checkpoints.
Polymorphism databases
NIEHS-SNPs MDM2.
Organism-specific databases
H-InvDB HIX0036698; -.
HGNC HGNC:6973; MDM2.
GenAtlas MDM2.
HPA CAB000086; -.
CAB016303; -.
MIM 164785; gene. [NCBI / EBI]
PharmGKB PA30718; -.
GeneCards Q00987.
Gene expression databases
ArrayExpress Q00987; -.
GermOnline ENSG00000135679; Homo sapiens.
Ontologies
GO
GO:0005829; Cellular component: cytosol (inferred from experiment from Reactome).
GO:0005626; Cellular component: insoluble fraction (inferred from direct assay from UniProtKB).
GO:0005730; Cellular component: nucleolus (inferred from direct assay from UniProtKB).
GO:0005654; Cellular component: nucleoplasm (inferred from direct assay from UniProtKB).
GO:0019899; Molecular function: enzyme binding (inferred from physical interaction from UniProtKB).
GO:0042802; Molecular function: identical protein binding (inferred from physical interaction from IntAct).
GO:0017163; Molecular function: negative regulator of basal transcription activity (inferred from direct assay from UniProtKB).
GO:0004842; Molecular function: ubiquitin-protein ligase activity (inferred from direct assay from UniProtKB).
GO:0008270; Molecular function: zinc ion binding (inferred from direct assay from UniProtKB).
GO:0008285; Biological process: negative regulation of cell proliferation (traceable author statement from ProtInc).
GO:0000122; Biological process: negative regulation of transcription from RNA polymerase II promoter (inferred from direct assay from UniProtKB).
GO:0006461; Biological process: protein complex assembly (inferred from direct assay from UniProtKB).
GO:0016567; Biological process: protein ubiquitination (inferred from direct assay from UniProtKB).
GO:0042176; Biological process: regulation of protein catabolic process (inferred from direct assay from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR016495; p53_neg-reg_MDM_2/4.
IPR003121; SWIB_MDM2.
IPR001876; Znf_RanBP2.
IPR001841; Znf_RING.
Graphical view of domain structure.
Gene3D G3DSA:1.10.245.10; SWIB_MDM2; 1.
Pfam PF02201; SWIB; 1.
PF00641; zf-RanBP; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF006748; p53_MDM_2/4; 1.
SMART SM00184; RING; 1.
SMART graphical view of domain structure.
PROSITE PS01358; ZF_RANBP2_1; 1.
PS50199; ZF_RANBP2_2; 1.
PS00518; ZF_RING_1; FALSE_NEG.
PS50089; ZF_RING_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q00987.
Genome annotation databases
Ensembl ENSG00000135679; Homo sapiens. [Contig view]
GeneID 4193; -.
KEGG hsa:4193; -.
Phylogenomic databases
HOVERGEN Q00987; -.
Other
LinkHub Q00987; -.
SOURCE MDM2; Homo sapiens.
ProtoNet Q00987.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Alternative splicing; Cytoplasm; Host-virus interaction; Ligase; Metal-binding; Nucleus; Phosphoprotein; Proto-oncogene; Ubl conjugation; Ubl conjugation pathway; Zinc; Zinc-finger.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   491  491     E3 ubiquitin-protein ligase Mdm2. PRO_0000157332
DOMAIN   27   107  81     SWIB. 
ZN_FING   299   328  30     RanBP2-type. 
ZN_FING   438   479  42     RING-type. 
REGION   150   230  81     Interaction with PYHIN1. 
REGION   170   306  137     Interaction with MTBP (By similarity). 
REGION   210   304  95     ARF-binding. 
REGION   223   232  10     Interaction with USP7. 
REGION   242   331  90     Region II. 
MOTIF   179   185  7     Nuclear localization signal (Potential). 
MOTIF   190   202  13     Nuclear export signal. 
MOTIF   466   473  8     Nucleolar localization signal (Potential). 
COMPBIAS   210   215  6     Poly-Ser. 
COMPBIAS   243   301  59     Asp/Glu-rich (acidic). 
VAR_SEQ   1    61        Missing (in isoform Mdm2-alpha). VSP_003207
VAR_SEQ   28   300        Missing (in isoform Mdm2-B). VSP_003209
VAR_SEQ   28   222        Missing (in isoform Mdm2-A and isoform Mdm2-A1). VSP_003208
VAR_SEQ   30   388        Missing (in isoform Mdm2-D). VSP_003210
VAR_SEQ   53   222        Missing (in isoform Mdm2-C). VSP_003211
VAR_SEQ   53    97        Missing (in isoform Mdm2-F). VSP_022578
VAR_SEQ   76   102        YCSNDLLGDLFGVPSFSVKEHRKIYTM -> NDCANLFPLVDLSIRELYISNYITLGI (in isoform Mdm2-E). VSP_003212
VAR_SEQ   103   491        Missing (in isoform Mdm2-E). VSP_003213
VAR_SEQ   115   169        Missing (in isoform Mdm2-G). VSP_022579
VAR_SEQ   275   300        Missing (in isoform Mdm2-A1). VSP_003214
MUTAGEN   305   305        C->S: No loss of ubiquitin ligase E3 activity. 
MUTAGEN   374   374        C->T: No loss of ubiquitin ligase E3 activity. 
MUTAGEN   438   438        C->L: No loss of ubiquitin ligase E3 activity. 
MUTAGEN   441   441        C->G: Fails to interact with MDM4. 
MUTAGEN   449   449        C->A: Loss of ubiquitin ligase E3 activity. 
MUTAGEN   449   449        C->S: No substantial decrease of ubiquitin ligase E3 activity. 
MUTAGEN   452   452        H->A: Loss of ubiquitin ligase E3 activity. 
MUTAGEN   455   455        T->A: Significant decrease of ubiquitin ligase E3 activity. 
MUTAGEN   457   457        H->S: Loss of ubiquitin ligase E3 activity. 
MUTAGEN   461   461        C->S: Loss of ubiquitin ligase E3 activity. 
MUTAGEN   464   464        C->A: Loss of ubiquitin ligase E3 activity, enhances protein stability. 
MUTAGEN   475   475        C->G: Loss of ubiquitin ligase E3 activity. 
MUTAGEN   478   478        C->R: Fails to interact with MDM4. 
MUTAGEN   478   478        C->S: Loss of ubiquitin ligase E3 activity. 
CONFLICT   17 &