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UniProtKB/Swiss-Prot entry P97675


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ENPP3_RAT
Primary accession number P97675
Secondary accession numbers P70641 P97676 Q4V8L6 Q63490
Integrated into Swiss-Prot on September 19, 2002
Sequence was last modified on September 19, 2002 (Sequence version 2)
Annotations were last modified on    September 2, 2008 (Entry version 70)
Name and origin of the protein
Protein name Ectonucleotide pyrophosphatase/phosphodiesterase family member 3
Synonyms E-NPP 3
Phosphodiesterase I/nucleotide pyrophosphatase 3
Phosphodiesterase I beta
PD-Ibeta
RB13-6 antigen
B10
CD203c antigen
Includes Alkaline phosphodiesterase I
     (EC 3.1.4.1)
Nucleotide pyrophosphatase
     (NPPase)
     (EC 3.6.1.9)
Gene name
Name: Enpp3
Synonyms: Pdnp3
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], PROTEIN SEQUENCE OF 331-339; 473-504; 544-558 AND 605-618, AND GLYCOSYLATION.
STRAIN=Sprague-Dawley;
TISSUE=Fetal brain;
DOI=10.1074/jbc.270.17.9849; PubMed=7730366 [NCBI, ExPASy, EBI, Israel, Japan]
Deissler H., Lottspeich F., Rajewsky M.F.;
"Affinity purification and cDNA cloning of rat neural differentiation and tumor cell surface antigen gp130RB13-6 reveals relationship to human and murine PC-1.";
J. Biol. Chem. 270:9849-9855(1995).
[2]
NUCLEOTIDE SEQUENCE [MRNA], PROTEIN SEQUENCE OF 494-503 AND 726-746, SUBCELLULAR LOCATION, AND TISSUE SPECIFICITY.
STRAIN=Sprague-Dawley;
TISSUE=Intestine;
DOI=10.1002/hep.510250434; PubMed=9096610 [NCBI, ExPASy, EBI, Israel, Japan]
Scott L.J., Delautier D., Meerson N.R., Trugnan G., Goding J.W., Maurice M.;
"Biochemical and molecular identification of distinct forms of alkaline phosphodiesterase I expressed on the apical and basolateral plasma membrane surfaces of rat hepatocytes.";
Hepatology 25:995-1002(1997).
[3]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=Sprague-Dawley;
TISSUE=Small intestine;
Sano K.;
"Molecular cloning of phosphodiesterase I cDNA from rat small intestine.";
Submitted (MAY-1994) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Placenta;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[5]
SUBCELLULAR LOCATION, AND GLYCOSYLATION.
PubMed=11069764 [NCBI, ExPASy, EBI, Israel, Japan]
Meerson N.R., Bello V., Delaunay J.-L., Slimane T.A., Delautier D., Lenoir C., Trugnan G., Maurice M.;
"Intracellular traffic of the ecto-nucleotide pyrophosphatase/phosphodiesterase NPP3 to the apical plasma membrane of MDCK and Caco-2 cells: apical targeting occurs in the absence of N-glycosylation.";
J. Cell Sci. 113:4193-4202(2000).
Comments
  • FUNCTION: Cleaves a variety of phosphodiester and phosphosulfate bonds including deoxynucleotides, nucleotide sugars, and NAD (By similarity).
  • CATALYTIC ACTIVITY: Hydrolytically removes 5'-nucleotides successively from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides.
  • CATALYTIC ACTIVITY: A dinucleotide + H2O = 2 mononucleotides.
  • COFACTOR: Binds 2 divalent metal cations per subunit (Probable).
  • ENZYME REGULATION: At low concentrations of ATP, a phosphorylated active site intermediate can be formed which inhibits further hydrolysis (By similarity).
  • SUBCELLULAR LOCATION: Membrane; Single-pass type II membrane protein (Potential). Secreted (By similarity). Note=Located to the apical surface in intestinal and kidney epithelial cells. Located to the cell surface of basophils, and to the apical plasma membrane of bile duct cells. Secreted in serum, and in lumen of epithelial cells (By similarity).
  • TISSUE SPECIFICITY: Highly expressed in intestinal epithelium. Also expressed in liver.
  • PTM: The N-terminal is blocked.
  • PTM: N-glycosylation is necessary for correct trafficking to the apical surface, but is not the apical targeting signal. No O-glycosylation.
  • PTM: It has been suggested that the active SMB domain may be permitted considerable disulfide bond heterogeneity or variability, thus two alternate disulfide patterns based on 3D structures are described with 1 disulfide bond conserved in both.
  • SIMILARITY: Belongs to the nucleotide pyrophosphatase/phosphodiesterase family.
  • SIMILARITY: Contains 2 SMB (somatomedin-B) domains.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
Z47987; CAA88029.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U78787; AAB61535.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U78788; AAB61536.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
D30649; BAA06333.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC097326; AAH97326.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A57080; A57080.
RefSeq NP_062243.2; -.
UniGene Rn.44
3D structure databases
ModBase P97675.
Organism-specific databases
RGD 708511; Enpp3.
Gene expression databases
ArrayExpress P97675; -.
GermOnline ENSRNOG00000013791; Rattus norvegicus.
Family and domain databases
InterPro IPR017849; Alkaline_Pase-like_a/b/a.
IPR001604; Endonuclease.
IPR002591; Phosphodiest/P_Trfase.
IPR001212; Somatomedin_B.
Graphical view of domain structure.
Gene3D G3DSA:3.40.720.10; Alk_phosphtse; 1.
G3DSA:3.40.570.10; Endonuclease; 1.
Pfam PF01663; Phosphodiest; 1.
PF01033; Somatomedin_B; 2.
Pfam graphical view of domain structure.
PRINTS PR00022; SOMATOMEDINB.
SMART SM00477; NUC; 1.
SM00201; SO; 2.
SMART graphical view of domain structure.
PROSITE PS00524; SMB_1; 2.
PS50958; SMB_2; 2.
PROSITE graphical view of domain structure (profiles).
BLOCKS P97675.
Genome annotation databases
Ensembl ENSRNOG00000013791; Rattus norvegicus. [Contig view]
GeneID 54410; -.
KEGG rno:54410; -.
Phylogenomic databases
HOVERGEN P97675; -.
Other
ProtoNet P97675.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Direct protein sequencing; Glycoprotein; Hydrolase; Membrane; Metal-binding; Multifunctional enzyme; Polymorphism; Repeat; Secreted; Signal-anchor; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   875  875     Ectonucleotide pyrophosphatase/phosphodiesterase family member 3. PRO_0000188571
TOPO_DOM   1    11  11     Cytoplasmic (Potential). 
TRANSMEM   12    30  19     Signal-anchor for type II membrane protein (Potential). 
TOPO_DOM   31   875  845     Extracellular (Potential). 
DOMAIN   51    94  44     SMB 1. 
DOMAIN   95   139  45     SMB 2. 
REGION   141   510  370     Phosphodiesterase. 
REGION   605   875  271     Nuclease. 
MOTIF   79    81  3     Cell attachment site (Potential). 
ACT_SITE   206   206        AMP-threonine intermediate (By similarity). 
METAL   168   168        Divalent metal cation 2 (Probable). 
METAL   326   326        Divalent metal cation 1 (Probable). 
METAL   330   330        Divalent metal cation 1 (Probable). 
METAL   373   373        Divalent metal cation 2 (Probable). 
METAL   374   374        Divalent metal cation 2 (Probable). 
METAL   483   483        Divalent metal cation 1 (Probable). 
CARBOHYD   237   237        N-linked (GlcNAc...) (Potential). 
CARBOHYD   280   280        N-linked (GlcNAc...) (Potential). 
CARBOHYD   289   289        N-linked (GlcNAc...) (Potential). 
CARBOHYD   533   533        N-linked (GlcNAc...) (Potential). 
CARBOHYD   574   574        N-linked (GlcNAc...) (Potential). 
CARBOHYD   594   594        N-linked (GlcNAc...) (Potential). 
CARBOHYD   702   702        N-linked (GlcNAc...) (Potential). 
CARBOHYD   789   789        N-linked (GlcNAc...) (Potential). 
DISULFID   55    72        Alternate (By similarity). 
DISULFID   55    59        Alternate (By similarity). 
DISULFID   59    90        Alternate (By similarity). 
DISULFID   70    83        Alternate (By similarity). 
DISULFID   70    72        Alternate (By similarity). 
DISULFID   76    82        By similarity. 
DISULFID   83    90        Alternate (By similarity). 
DISULFID   99   116        Alternate (By similarity). 
DISULFID   99   104        Alternate (By similarity). 
DISULFID   104   134        Alternate (By similarity). 
DISULFID   114   127        Alternate (By similarity). 
DISULFID   114   116        Alternate (By similarity). 
DISULFID   120   126        By similarity. 
DISULFID   127   134        Alternate (By similarity). 
VARIANT   124   124  1     K -> E. 
VARIANT   201   201  1     M -> V. 
VARIANT   596   597  2     SG -> NR. 
CONFLICT   111   111        A -> T (in Ref. 3; BAA06333). 
CONFLICT   273   273        P -> L (in Ref. 1; CAA88029). 
CONFLICT   475   476        SS -> VP (in Ref. 3; BAA06333). 
CONFLICT   814   814        N -> KP (in Ref. 3; BAA06333). 
Sequence information
Length: 875 AA [This is the length of the unprocessed precursor] Molecular weight: 99072 Da [This is the MW of the unprocessed precursor] CRC64: 4205F263E8A933EA [This is a checksum on the sequence]
        10         20         30         40         50         60 
MDSRLALATE EPIKKDSLKR YKILCAVLLA LLVIVSLGLG LGLGLRKPEE HIGSCRKKCF 

        70         80         90        100        110        120 
DSSHRGLEGC RCDSGCTDRG DCCWDFEDTC VKSTQIWTCN SFRCGETRLE AALCSCADDC 

       130        140        150        160        170        180 
LQRKDCCTDY KAVCQGEVPW VTEACASSQE PQCPEGFDQP PVILFSMDGF RAEYLQTWST 

       190        200        210        220        230        240 
LLPNINKLKT CGLHSKYMRA MYPTKTFPNH YTIVTGLYPE SHGIIDNNMY DVYLNKNFSL 

       250        260        270        280        290        300 
SSVEKSNPAW WSGQPIWLTA MYQGLKAASY YWPGSDVAVN GSFPNIYRNY SNSVPYESRI 

       310        320        330        340        350        360 
ATLLQWLDLP KAERPSFYTI YVEEPDSAGH KSGPVSAGVI KALQLVDDAF GMLMEGLKQR 

       370        380        390        400        410        420 
NLHNCVNIIV LADHGMDQTS CDRVEYMTDY FPEINFYMYQ GPAPRIRTRN IPQDFFTFNS 

       430        440        450        460        470        480 
EEIVRDLSCR KSDQHFKPYL TPDLPKRLHY AKNVRIDKVH LMVDRQWLAY RNKGSSNCEG 

       490        500        510        520        530        540 
GTHGYNNEFK SMEAIFLAHG PSFKEKTVIE PFENIEVYNL LCDLLHIQPA PNNGSHGSLN 

       550        560        570        580        590        600 
HLLKAPFYQP SHAEELSKSA GCGFTTPLPK DSLNCSCLAL QTSGQEEQVN QRLNLSGGEV 

       610        620        630        640        650        660 
SATEKTNLPF GRPRVIQKNK DHCLLYHREY VSGFGKAMKM PMWSSYTVPK PGDTSSLPPT 

       670        680        690        700        710        720 
VPDCLRADVR VDPSESQKCS FYLADQNIDH GFLYPPAIKG NNESQYDALI TSNLVPMYKE 

       730        740        750        760        770        780 
FKKMWDYFHK VLLIKYAIER NGVNVVSGPI FDYNYDGHFD APDEITNYVA GTDVPVPTHY 

       790        800        810        820        830        840 
FVVLTSCKNK THTPDSCPGW LDVLPFVVPH RPTNVESCPE NKAEDLWVEE RFKAHIARVR 

       850        860        870 
DVELLTGLDF YQEKTQPVSE ILQLKTYLPT FETII 

P97675 in FASTA format

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