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UniProtKB/Swiss-Prot entry P70496


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PLD1_RAT
Primary accession number P70496
Secondary accession numbers O08959 O35856 O54765 P70497 Q9QWJ6
Integrated into Swiss-Prot on November 1, 1997
Sequence was last modified on October 18, 2001 (Sequence version 3)
Annotations were last modified on    November 4, 2008 (Entry version 71)
Name and origin of the protein
Protein name Phospholipase D1
Synonyms PLD 1
rPLD1
EC 3.1.4.4
Choline phosphatase 1
Phosphatidylcholine-hydrolyzing phospholipase D1
Gene name
Name: Pld1
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS PLD1A AND PLD1B).
PubMed=9533024 [NCBI, ExPASy, EBI, Israel, Japan]
Nakashima S., Matsuda Y., Akao Y., Yoshimura S., Sakai H., Hayakawa K., Andoh M., Nozawa Y.;
"Molecular cloning and chromosome mapping of rat phospholipase D genes, Pld1a, Pld1b and Pld2.";
Cytogenet. Cell Genet. 79:109-113(1997).
[2]
NUCLEOTIDE SEQUENCE [MRNA] OF 467-673 (ISOFORMS PLD1A AND PLD1B).
TISSUE=Glial cell;
DOI=10.1006/bbrc.1996.1201; PubMed=8753790 [NCBI, ExPASy, EBI, Israel, Japan]
Yoshimura S., Nakashima S., Ohguchi K., Sakai H., Shinoda J., Sakai N., Nozawa Y.;
"Differential mRNA expression of phospholipase D (PLD) isozymes during cAMP-induced differentiation in C6 glioma cells.";
Biochem. Biophys. Res. Commun. 225:494-499(1996).
[3]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM PLD1B).
DOI=10.1074/jbc.272.46.29263; PubMed=9361006 [NCBI, ExPASy, EBI, Israel, Japan]
Park S.K., Provost J.J., Bae C.D., Ho W.T., Exton J.H.;
"Cloning and characterization of phospholipase D from rat brain.";
J. Biol. Chem. 272:29263-29271(1997).
[4]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS PLD1A AND PLD1B).
PubMed=9445394 [NCBI, ExPASy, EBI, Israel, Japan]
Katayama K., Kodaki T., Nagamachi Y., Yamashita S.;
"Cloning, differential regulation and tissue distribution of alternatively spliced isoforms of ADP-ribosylation-factor-dependent phospholipase D from rat liver.";
Biochem. J. 329:647-652(1998).
[5]
NUCLEOTIDE SEQUENCE [MRNA] OF 1-511.
Lassegue B., Alexander R.W., Griendling K.;
"Molecular cloning of a cDNA homologous to a phospholipase D1 segment.";
Submitted (FEB-1997) to the EMBL/GenBank/DDBJ databases.
[6]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM PLD1C).
TISSUE=Lung;
Park S.K., Exton J.H.;
"Phospholipase D not having transphosphatidylation reaction.";
Submitted (AUG-1997) to the EMBL/GenBank/DDBJ databases.
[7]
PALMITOYLATION AT CYS-240 AND CYS-241, MUTAGENESIS OF CYS-240 AND CYS-241, AND PHOSPHORYLATION.
DOI=10.1074/jbc.M009425200; PubMed=11121416 [NCBI, ExPASy, EBI, Israel, Japan]
Xie Z., Ho W.T., Exton J.H.;
"Requirements and effects of palmitoylation of rat PLD1.";
J. Biol. Chem. 276:9383-9391(2001).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AB003170; BAA24076.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB003171; BAA24077.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U69550; AAB86910.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB000778; BAA24576.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB000779; BAA24577.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U88986; AAB91329.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF017251; AAD01609.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR T13725; T13725.
T13732; T13732.
T13943; T13943.
T46635; T46635.
RefSeq NP_112254.1; -.
UniGene Rn.11130
3D structure databases
ModBase P70496.
PTM databases
PhosphoSite P70496; -.
Organism-specific databases
RGD 3349; Pld1.
Gene expression databases
ArrayExpress P70496; -.
GermOnline ENSRNOG00000028156; Rattus norvegicus.
Ontologies
GO
GO:0005789; Cellular component: endoplasmic reticulum membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0000139; Cellular component: Golgi membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0031902; Cellular component: late endosome membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0004630; Molecular function: phospholipase D activity (inferred from electronic annotation from EC).
GO:0016042; Biological process: lipid catabolic process (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR001849; PH.
IPR011993; PH_type.
IPR015679; Phospholipase_D.
IPR001736; PLD.
IPR016555; PLipase_D_euk.
IPR001683; PX.
Graphical view of domain structure.
Gene3D G3DSA:2.30.29.30; PH_type; 1.
G3DSA:3.30.1520.10; PX; 1.
PANTHER PTHR18896; Phospholipase_D; 1.
Pfam PF00169; PH; 1.
PF00614; PLDc; 2.
PF00787; PX; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF009376; Phospholipase_D_euk; 1.
SMART SM00233; PH; 1.
SM00155; PLDc; 2.
SM00312; PX; 1.
SMART graphical view of domain structure.
PROSITE PS50003; PH_DOMAIN; 1.
PS50035; PLD; 2.
PS50195; PX; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P70496.
ProtoNet P70496.
Genome annotation databases
Ensembl ENSRNOG00000028156; Rattus norvegicus. [Contig view]
GeneID 25096; -.
KEGG rno:25096; -.
Phylogenomic databases
HOVERGEN P70496; -.
Other
NextBio 605397; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Alternative splicing; Cytoplasm; Endoplasmic reticulum; Endosome; Golgi apparatus; Hydrolase; Lipid degradation; Lipoprotein; Membrane; Palmitate; Phosphoprotein; Repeat.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   1074  1074     Phospholipase D1. PRO_0000218804
DOMAIN   81    212  132     PX. 
DOMAIN   219    328  110     PH. 
DOMAIN   459    486  28     PLD phosphodiesterase 1. 
DOMAIN   891    918  28     PLD phosphodiesterase 2. 
REGION   463    928  466     Catalytic. 
MOD_RES   629    629        Phosphoserine (By similarity). 
LIPID   240    240        S-palmitoyl cysteine (Probable). 
LIPID   241    241        S-palmitoyl cysteine (Probable). 
VAR_SEQ   585    623        SYFNHYRSHQNLIHGIKPHLKLFRPSSESEQGLTRHSAD -> N (in isoform PLD1B). VSP_005024
VAR_SEQ   586    590        YFNHY -> ESRLR (in isoform PLD1C). VSP_005025
VAR_SEQ   591   1074        Missing (in isoform PLD1C). VSP_005026
MUTAGEN   240    240        C->A: Abolishes palmitoylation and weakens membrane association; when associated with A-241. 
MUTAGEN   241    241        C->A: Abolishes palmitoylation and weakens membrane association; when associated with A-240. 
CONFLICT   4      4        R -> K (in Ref. 4; BAA24576). 
CONFLICT   22     22        S -> R (in Ref. 3 and 6). 
CONFLICT   283    283        R -> K (in Ref. 1; BAA24076/BAA24077). 
CONFLICT   542    542        N -> D (in Ref. 1, 2 and 4). 
CONFLICT   600    600        I -> L (in Ref. 4; BAA24576). 
CONFLICT   709    709        P -> A (in Ref. 1; BAA24076/BAA24077). 
CONFLICT   735    736        PG -> EV (in Ref. 1; BAA24076/BAA24077). 
CONFLICT   739    740        HA -> QP (in Ref. 1; BAA24076/BAA24077). 
CONFLICT   773    773        S -> T (in Ref. 1). 
CONFLICT   775    775        H -> R (in Ref. 1). 
CONFLICT   786    786        S -> T (in Ref. 1; BAA24076/BAA24077). 
CONFLICT   800    800        A -> C (in Ref. 1; BAA24076/BAA24077). 
CONFLICT   809    809        H -> T (in Ref. 1; BAA24076/BAA24077). 
CONFLICT   830    830        D -> N (in Ref. 1; BAA24076/BAA24077). 
CONFLICT   934    935        TE -> RQ (in Ref. 3; AAB86910). 
CONFLICT   951    954        FAQG -> SLSTV (in Ref. 1). 
Sequence information
Length: 1074 AA [This is the length of the unprocessed precursor] Molecular weight: 123814 Da [This is the MW of the unprocessed precursor] CRC64: 286943A447A881DB [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSLRSEARVN TSTLQKIAAD MSNLIENLDT RELHFEGEEV EYDASPGDPT AQEACIPFSS 

        70         80         90        100        110        120 
IYNTQGFKEP NIQIYLSGCP VKAQVLEVER FTSTSRMPSV NLYTIELTHG EFTWQVKRKF 

       130        140        150        160        170        180 
KHFQEFHREL LKYKAFIRIP IPTKRHTFRR QNVKEEPREM PSLPRSSENA IQEEQFFGRR 

       190        200        210        220        230        240 
KQLEDYLTKI LKMPMYRNYH ATTEFLDVSQ LSFIHDLGPK GLEGMIMKRS GGHRIPGVNC 

       250        260        270        280        290        300 
CGHGRACYRW SKRWLIVKDS FLLYMKPDSG AIAFVLLVDK EFRIKVGKKE TETKYGLRID 

       310        320        330        340        350        360 
NLSRTLILKC NSYRHARWWG GAIEEFIQKH GTDFLKDHRF GSYAAVHENI LAKWYVNAKG 

       370        380        390        400        410        420 
YFEDIANAME GATEEIFITD WWLSPEIFLK RPVVEGNRWR LDCILKRKAQ QGVRIFIMLY 

       430        440        450        460        470        480 
KEVELALGIN SEYTKRTLMR LHPNIKVMRH PDHVSSSVYL WAHHEKLVII DQSVAFVGGI 

       490        500        510        520        530        540 
DLAYGRWDDN EHRLTDVGSV KRVTSGQSLG SLTAASVESM ESLSLKDKHQ SHKNEPVLKS 

       550        560        570        580        590        600 
VNDTDMKLKG IGKSRKFSKF SLYRQLHRRN LHNSDSISSV DSASSYFNHY RSHQNLIHGI 

       610        620        630        640        650        660 
KPHLKLFRPS SESEQGLTRH SADTGSIRSV QTGVGELHGE TRFWHGKDYC NFVFKDWVQL 

       670        680        690        700        710        720 
DKPFADFIDR YSTPRMPWHD IGSVVHGKAA RDVARHFIQR WNFTKIMKPK YRSLSYPFLL 

       730        740        750        760        770        780 
PKSQATAHEL RYQVPGAVHA KAQLLRSAAD WSAGIKHHEE SIHAAYTHVI ENSKHYIYIE 

       790        800        810        820        830        840 
NQFFISCADD KVVFNKVGNA IAQRILKAHR EGQRYRVYIV IPLLPGFEGD ISTGGGNALQ 

       850        860        870        880        890        900 
AIMHFNYRTM CRGESSILEQ LKPELGNKWI NYISFCGLRT HAELEGNLVT ELIYVHSKLL 

       910        920        930        940        950        960 
IADDNTVIIG SANINDRSML GKRDSEMAVI VQDTETVPSV MDGKEYQAGR FAQGLRLECF 

       970        980        990       1000       1010       1020 
RLVLGYLSDP SEDIQDPVSD KFFKEIWVST AARNATIYDK VFRCLPNDEV HNLIQLRDFI 

      1030       1040       1050       1060       1070 
NKPILAKEDR LRAEEELRKI RGFLVQFPFY FLSEENLLPS VGTKEAIVPM EVWT 

P70496 in FASTA format

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View entry in raw text format (no links)
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