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UniProtKB/Swiss-Prot entry P70404


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name IDH3G_MOUSE
Primary accession number P70404
Secondary accession numbers None
Integrated into Swiss-Prot on November 1, 1997
Sequence was last modified on February 1, 1997 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 71)
Name and origin of the protein
Protein name Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial [Precursor]
Synonyms EC 1.1.1.41
Isocitric dehydrogenase
NAD(+)-specific ICDH
Gene name
Name: Idh3g
From
Mus musculus (Mouse) [TaxID: 10090] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1006/geno.1997.4822; PubMed=9286695 [NCBI, ExPASy, EBI, Israel, Japan]
Brenner V., Nyakatura G., Rosenthal A., Platzer M.;
"Genomic organization of two novel genes on human Xq28: compact head to head arrangement of IDH gamma and TRAP delta is conserved in rat and mouse.";
Genomics 44:8-14(1997).
[2]
NUCLEOTIDE SEQUENCE.
Platzer M., Brenner V., Reichwald K., Wiehe T., Oksche A., Rosenthal A.;
"Comparative sequence analysis of the mouse L1cam locus and the corresponding region of human Xq28.";
Submitted (MAR-1999) to the EMBL/GenBank/DDBJ databases.
[3]
PROTEIN SEQUENCE OF 102-108; 116-129; 150-190 AND 227-237, AND MASS SPECTROMETRY.
STRAIN=C57BL/6;
TISSUE=Brain;
Lubec G., Kang S.U.;
Submitted (APR-2007) to UniProtKB.
[4]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-363, AND MASS SPECTROMETRY.
TISSUE=Brain;
DOI=10.1074/jbc.M411220200; PubMed=15572359 [NCBI, ExPASy, EBI, Israel, Japan]
Collins M.O., Yu L., Coba M.P., Husi H., Campuzano I., Blackstock W.P., Choudhary J.S., Grant S.G.;
"Proteomic analysis of in vivo phosphorylated synaptic proteins.";
J. Biol. Chem. 280:5972-5982(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U68564; AAC53340.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF133093; -; NOT_ANNOTATED_CDS; Genomic_DNA.[EMBL / GenBank / DDBJ]
RefSeq NP_032349.1; -.
UniGene Mm.14825
3D structure databases
HSSP P00351; 1OSJ. [HSSP ENTRY / PDB]
ModBase P70404.
Protein-protein interaction databases
IntAct P70404; -.
PTM databases
PhosphoSite P70404; -.
Organism-specific databases
MGI MGI:1099463; Idh3g.
Gene expression databases
ArrayExpress P70404; -.
CleanEx MM_IDH3G; -.
GermOnline ENSMUSG00000002010; Mus musculus.
Ontologies
GO
GO:0005739; Cellular component: mitochondrion (inferred from sequence or structural similarity from UniProtKB).
GO:0004449; Molecular function: isocitrate dehydrogenase (NAD+) activity (inferred from sequence or structural similarity from UniProtKB).
GO:0006102; Biological process: isocitrate metabolic process (inferred from sequence or structural similarity from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR004434; IsoCit_DHase_NAD_mit.
IPR001804; IsoCit_IM_DHase.
Graphical view of domain structure.
Gene3D G3DSA:3.40.718.10; IDH_IMDH; 1.
PANTHER PTHR11835; IDH_IMDH_dimeric; 1.
Pfam PF00180; Iso_dh; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR00175; mito_nad_idh; 1.
PROSITE PS00470; IDH_IMDH; 1.
BLOCKS P70404.
Genome annotation databases
Ensembl ENSMUSG00000002010; Mus musculus. [Contig view]
GeneID 15929; -.
KEGG mmu:15929; -.
Phylogenomic databases
HOGENOM P70404; -.
HOVERGEN P70404; -.
Other
SOURCE Idh3g; Mus musculus.
ProtoNet P70404.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
ATP-binding; Direct protein sequencing; Magnesium; Manganese; Metal-binding; Mitochondrion; NAD; Nucleotide-binding; Oxidoreductase; Phosphoprotein; Transit peptide; Tricarboxylic acid cycle.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
TRANSIT   1    39  39     Mitochondrion (By similarity). 
CHAIN   40   393  354     Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial. PRO_0000014451
NP_BIND   56    84  29     NAD (Potential). 
NP_BIND   309   316  8     ATP (Potential). 
METAL   254   254        Magnesium or manganese (By similarity). 
BINDING   136   136        Substrate (By similarity). 
BINDING   167   167        Substrate (By similarity). 
BINDING   254   254        Substrate (By similarity). 
SITE   174   174  1     Critical for catalysis (By similarity). 
SITE   221   221  1     Critical for catalysis (By similarity). 
MOD_RES   363   363        Phosphothreonine. 
Sequence information
Length: 393 AA [This is the length of the unprocessed precursor] Molecular weight: 42785 Da [This is the MW of the unprocessed precursor] CRC64: 4023560C44C1F4D3 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MALKVAIAAG GAAKAMLKPT LLCRPWEVLA AHVAPRRSIS SQQTIPPSAK YGGRHTVTMI 

        70         80         90        100        110        120 
PGDGIGPELM LHVKSVFRHA CVPVDFEEVH VSSNADEEDI RNAIMAIRRN RVALKGNIET 

       130        140        150        160        170        180 
NHNLPPSHKS RNNILRTSLD LYANVIHCKS LPGVVTRHKD IDILIVRENT EGEYSSLEHE 

       190        200        210        220        230        240 
SVAGVVESLK IITKAKSLRI AEYAFKLAQE SGRKKVTAVH KANIMKLGDG LFLQCCREVA 

       250        260        270        280        290        300 
AHYPQITFDS MIVDNTTMQL VSRPQQFDVM VMPNLYGNIV NNVCAGLVGG PGLVAGANYG 

       310        320        330        340        350        360 
HVYAVFETAT RNTGKSIANK NIANPTATLL ASCMMLDHLK LHSYATSIRK AVLASMDNEN 

       370        380        390 
MHTPDIGGQG TTSQAIQDII RHIRIINGRA VEA 

P70404 in FASTA format

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