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UniProtKB/Swiss-Prot entry P68661


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name YBCO_ECOLI
Primary accession number P68661
Secondary accession numbers Q2MBN2 Q37872 Q47271
Integrated into Swiss-Prot on December 7, 2004
Sequence was last modified on December 7, 2004 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 26)
Name and origin of the protein
Protein name 82 prophage-derived uncharacterized protein ybcO
Synonyms None
Gene name
Name: ybcO
OrderedLocusNames: b0549, JW0537
From
Escherichia coli (strain K12) [TaxID: 83333] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=K12 / MG1655 / ATCC 47076;
DOI=10.1006/jmbi.1996.0185; PubMed=8648624 [NCBI, ExPASy, EBI, Israel, Japan]
Mahdi A.A., Sharples G.J., Mandal T.N., Lloyd R.G.;
"Holliday junction resolvases encoded by homologous rusA genes in Escherichia coli K-12 and phage 82.";
J. Mol. Biol. 257:561-573(1996).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / MG1655 / ATCC 47076;
Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M., Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D., Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.;
"Sequence of minutes 4-25 of Escherichia coli.";
Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / MG1655 / ATCC 47076;
DOI=10.1126/science.277.5331.1453; PubMed=9278503 [NCBI, ExPASy, EBI, Israel, Japan]
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.;
"The complete genome sequence of Escherichia coli K-12.";
Science 277:1453-1474(1997).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
DOI=10.1038/msb4100049; PubMed=16738553 [NCBI, ExPASy, EBI, Israel, Japan]
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.";
Mol. Syst. Biol. 2:E1-E5(2006).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X92587; CAA63320.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U82598; AAB40745.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U00096; AAC73650.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP009048; BAE76324.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR C64787; C64787.
RefSeq AP_001194.1; -.
NP_415081.1; -.
3D structure databases
ModBase P68661.
Protein-protein interaction databases
IntAct P68661; -.
Enzyme and pathway databases
BioCyc EcoCyc:G6305-MON; -.
Organism-specific databases
EchoBASE EB3396; -.
EcoGene EG13631; ybcO.
Ontologies
GO
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
QuickGo view.
Family and domain databases
InterPro IPR010774; DUF1364.
Graphical view of domain structure.
Pfam PF07102; DUF1364; 1.
Pfam graphical view of domain structure.
BLOCKS P68661.
Genome annotation databases
GeneID 945147; -.
GenomeReviews U00096_GR; b0549.
AP009048_GR; JW0537.
KEGG ecj:JW0537; -.
eco:b0549; -.
Phylogenomic databases
HOGENOM P68661; -.
Genome annotation databases
CMR P68661; b0549.
Other
ProtoNet P68661.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   96  96     82 prophage-derived uncharacterized protein ybcO. PRO_0000168654
Sequence information
Length: 96 AA [This is the length of the unprocessed precursor] Molecular weight: 10348 Da [This is the MW of the unprocessed precursor] CRC64: AB066A8AE7B273C7 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MADLRKAARG RECQVRIPGV CNGNPETSVL AHIRLTGLCG TGTKPPDLIA TIACSACHDE 

        70         80         90 
IDRRTHFVDA GYAKECALEG MARTQVIWLK EGVIKA 

P68661 in FASTA format

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