ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry P68206

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name YJBJ_ECOLI
Primary accession number P68206
Secondary accession numbers P32691 Q2M6Q9
Integrated into Swiss-Prot on October 25, 2004
Sequence was last modified on October 25, 2004 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 42)
Name and origin of the protein
Protein name UPF0337 protein yjbJ
Synonyms None
Gene name
Name: yjbJ
OrderedLocusNames: b4045, JW4005
From
Escherichia coli (strain K12) [TaxID: 83333] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
Protein existence 1: Evidence at protein level;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / MG1655 / ATCC 47076;
DOI=10.1093/nar/21.23.5408; PubMed=8265357 [NCBI, ExPASy, EBI, Israel, Japan]
Blattner F.R., Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L.;
"Analysis of the Escherichia coli genome. IV. DNA sequence of the region from 89.2 to 92.8 minutes.";
Nucleic Acids Res. 21:5408-5417(1993).
[2]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / MG1655 / ATCC 47076;
DOI=10.1126/science.277.5331.1453; PubMed=9278503 [NCBI, ExPASy, EBI, Israel, Japan]
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.;
"The complete genome sequence of Escherichia coli K-12.";
Science 277:1453-1474(1997).
[3]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
DOI=10.1038/msb4100049; PubMed=16738553 [NCBI, ExPASy, EBI, Israel, Japan]
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.";
Mol. Syst. Biol. 2:E1-E5(2006).
[4]
 PROTEIN SEQUENCE OF 1-12.
STRAIN=K12 / EMG2;
PubMed=9298646 [NCBI, ExPASy, EBI, Israel, Japan]
Link A.J., Robison K., Church G.M.;
"Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12.";
Electrophoresis 18:1259-1313(1997).
[5]
 PROTEIN SEQUENCE OF 1-10.
STRAIN=K12;
DOI=10.1111/j.1574-6968.1998.tb13343.x; PubMed=9868784 [NCBI, ExPASy, EBI, Israel, Japan]
Wasinger V.C., Humphery-Smith I.;
"Small genes/gene-products in Escherichia coli K-12.";
FEMS Microbiol. Lett. 169:375-382(1998).
[6]
 STRUCTURE BY NMR.
DOI=10.1002/prot.10120.abs; PubMed=12001238 [NCBI, ExPASy, EBI, Israel, Japan]
Pineda-Lucena A., Liao J., Wu B., Yee A., Cort J.R., Kennedy M.A., Edwards A.M., Arrowsmith C.H.;
"NMR structure of the hypothetical protein encoded by the YjbJ gene from Escherichia coli.";
Proteins 47:572-574(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U00006; AAC43139.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U00096; AAC77015.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP009048; BAE78047.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR D65212; D65212.
RefSeq AP_004546.1; -.
NP_418469.1; -.
3D structure databases
PDB
1RYK; NMR; -; A=1-69.[ExPASy / RCSB / EBI]
PDBsum 1RYK; -.
ModBase P68206.
Protein-protein interaction databases
IntAct P68206; -.
Enzyme and pathway databases
BioCyc EcoCyc:EG11928-MON; -.
Organism-specific databases
EchoBASE EB1872; -.
EcoGene EG11928; yjbJ.
Ontologies
GO
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
QuickGo view.
Family and domain databases
InterPro IPR008462; CsbD.
Graphical view of domain structure.
Pfam PF05532; CsbD; 1.
Pfam graphical view of domain structure.
BLOCKS P68206.
Genome annotation databases
GeneID 948553; -.
GenomeReviews U00096_GR; b4045.
AP009048_GR; JW4005.
KEGG ecj:JW4005; -.
eco:b4045; -.
Phylogenomic databases
HOGENOM P68206; -.
Genome annotation databases
CMR P68206; b4045.
Other
ProtoNet P68206.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Complete proteome; Direct protein sequencing.
Features
SEVIEWER logo Feature table viewer
KeyFrom  To Length Description FTId
CHAIN   1   69  69     UPF0337 protein yjbJ. PRO_0000209999
STRAND   6    8  3      
HELIX   9   20  12      
HELIX   26   32  7      
HELIX   36   46  11      
HELIX   51   65  15      
Sequence information
Length: 69 AA [This is the length of the unprocessed precursor] Molecular weight: 8325 Da [This is the MW of the unprocessed precursor] CRC64: 9A7B50816959F031 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MNKDEAGGNW KQFKGKVKEQ WGKLTDDDMT IIEGKRDQLV GKIQERYGYQ KDQAEKEVVD 


WETRNEYRW
P68206 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA) 		Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Hosted by ch flag SIB Switzerland Mirror sites: Australia Brazil Canada China Korea
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!