[1]
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NUCLEOTIDE SEQUENCE [MRNA].
PubMed=2988935 [NCBI, ExPASy, EBI, Israel, Japan]
Wiborg O.,
Pedersen M.S.,
Wind A.,
Berglund L.E.,
Marcker K.A.,
Vuust J.;
"The human ubiquitin multigene family: some genes contain multiple directly repeated ubiquitin coding sequences.";
EMBO J. 4:755-759(1985).
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[2]
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NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1016/0006-291X(87)90970-3; PubMed=2820408 [NCBI, ExPASy, EBI, Israel, Japan]
Einspanier R.,
Sharma H.S.,
Scheit K.H.;
"Cloning and sequence analysis of a cDNA encoding poly-ubiquitin in human ovarian granulosa cells.";
Biochem. Biophys. Res. Commun. 147:581-587(1987).
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[3]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA] (UBB).
TISSUE=Lymphocyte;
DOI=10.1093/nar/15.2.443; PubMed=3029682 [NCBI, ExPASy, EBI, Israel, Japan]
Baker R.T.,
Board P.G.;
"The human ubiquitin gene family: structure of a gene and pseudogenes from the Ub B subfamily.";
Nucleic Acids Res. 15:443-463(1987).
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[4]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (UBA52).
DOI=10.1093/nar/19.5.1035; PubMed=1850507 [NCBI, ExPASy, EBI, Israel, Japan]
Baker R.T.,
Board P.G.;
"The human ubiquitin-52 amino acid fusion protein gene shares several structural features with mammalian ribosomal protein genes.";
Nucleic Acids Res. 19:1035-1040(1991).
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[5]
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NUCLEOTIDE SEQUENCE [MRNA] (UBA52).
Wang H.,
Zhang Y.,
Okamoto T.;
"Human ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52) in salivary epithelial cells.";
Submitted (FEB-2001) to the EMBL/GenBank/DDBJ databases.
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[6]
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NUCLEOTIDE SEQUENCE [MRNA] (RPS27A).
DOI=10.1002/eji.1830211113; PubMed=1657614 [NCBI, ExPASy, EBI, Israel, Japan]
Pancre V.,
Pierce R.J.,
Fournier F.,
Mehtali M.,
Delanoye A.,
Capron A.,
Auriault C.;
"Effect of ubiquitin on platelet functions: possible identity with platelet activity suppressive lymphokine (PASL).";
Eur. J. Immunol. 21:2735-2741(1991).
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[7]
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NUCLEOTIDE SEQUENCE [MRNA] (RPS27A).
PubMed=1370760 [NCBI, ExPASy, EBI, Israel, Japan]
Adams S.M.,
Sharp M.G.,
Walker R.A.,
Brammar W.J.,
Varley J.M.;
"Differential expression of translation-associated genes in benign and malignant human breast tumours.";
Br. J. Cancer 65:65-71(1992).
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[8]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA] (UBC).
DOI=10.1016/0378-1119(96)00145-X; PubMed=8917096 [NCBI, ExPASy, EBI, Israel, Japan]
Nenoi M.,
Mita K.,
Ichimura S.,
Cartwright I.L.,
Takahashi E.,
Yamauchi M.,
Tsuji H.;
"Heterogeneous structure of the polyubiquitin gene UbC of HeLa S3 cells.";
Gene 175:179-185(1996).
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[9]
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NUCLEOTIDE SEQUENCE [MRNA] (UBC).
PubMed=9644242 [NCBI, ExPASy, EBI, Israel, Japan]
Kim N.S.,
Yamaguchi T.,
Sekine S.,
Saeki M.,
Iwamuro S.,
Kato S.;
"Cloning of human polyubiquitin cDNAs and a ubiquitin-binding assay involving its in vitro translation product.";
J. Biochem. 124:35-39(1998).
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[10]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA] (UBC).
PubMed=9504932 [NCBI, ExPASy, EBI, Israel, Japan]
Nenoi M.,
Mita K.,
Ichimura S.,
Kawano A.;
"Higher frequency of concerted evolutionary events in rodents than in man at the polyubiquitin gene VNTR locus.";
Genetics 148:867-876(1998).
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[11]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA] (UBB AND UBC).
DOI=10.1007/s00239-003-2532-4; PubMed=14745543 [NCBI, ExPASy, EBI, Israel, Japan]
Tachikui H.,
Saitou N.,
Nakajima T.,
Hayasaka I.,
Ishida T.,
Inoue I.;
"Lineage-specific homogenization of the polyubiquitin gene among human and great apes.";
J. Mol. Evol. 57:737-744(2003).
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[12]
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NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] (UBA52).
DOI=10.1038/nature02399; PubMed=15057824 [NCBI, ExPASy, EBI, Israel, Japan]
Grimwood J.,
Gordon L.A.,
Olsen A.S.,
Terry A.,
Schmutz J.,
Lamerdin J.E.,
Hellsten U.,
Goodstein D.,
Couronne O.,
Tran-Gyamfi M.,
Aerts A.,
Altherr M.,
Ashworth L.,
Bajorek E.,
Black S.,
Branscomb E.,
Caenepeel S.,
Carrano A.V.,
Caoile C., ![]()
Chan Y.M.,
Christensen M.,
Cleland C.A.,
Copeland A.,
Dalin E.,
Dehal P.,
Denys M.,
Detter J.C.,
Escobar J.,
Flowers D.,
Fotopulos D.,
Garcia C.,
Georgescu A.M.,
Glavina T.,
Gomez M.,
Gonzales E.,
Groza M.,
Hammon N.,
Hawkins T.,
Haydu L.,
Ho I.,
Huang W.,
Israni S.,
Jett J.,
Kadner K.,
Kimball H.,
Kobayashi A.,
Larionov V.,
Leem S.-H.,
Lopez F.,
Lou Y.,
Lowry S.,
Malfatti S.,
Martinez D.,
McCready P.M.,
Medina C.,
Morgan J.,
Nelson K.,
Nolan M.,
Ovcharenko I.,
Pitluck S.,
Pollard M.,
Popkie A.P.,
Predki P.,
Quan G.,
Ramirez L.,
Rash S.,
Retterer J.,
Rodriguez A.,
Rogers S.,
Salamov A.,
Salazar A.,
She X.,
Smith D.,
Slezak T.,
Solovyev V.,
Thayer N.,
Tice H.,
Tsai M.,
Ustaszewska A.,
Vo N.,
Wagner M.,
Wheeler J.,
Wu K.,
Xie G.,
Yang J.,
Dubchak I.,
Furey T.S.,
DeJong P.,
Dickson M.,
Gordon D.,
Eichler E.E.,
Pennacchio L.A.,
Richardson P.,
Stubbs L.,
Rokhsar D.S.,
Myers R.M.,
Rubin E.M.,
Lucas S.M.;
"The DNA sequence and biology of human chromosome 19.";
Nature 428:529-535(2004).
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[13]
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NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (RPS27A; UBB AND UBC).
TISSUE=Brain, Liver, Lung, and Placenta;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
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[14]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-34.
DOI=10.1101/gr.214202; PubMed=11875025 [NCBI, ExPASy, EBI, Israel, Japan]
Yoshihama M.,
Uechi T.,
Asakawa S.,
Kawasaki K.,
Kato S.,
Higa S.,
Maeda N.,
Minoshima S.,
Tanaka T.,
Shimizu N.,
Kenmochi N.;
"The human ribosomal protein genes: sequencing and comparative analysis of 73 genes.";
Genome Res. 12:379-390(2002).
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[15]
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PROTEIN SEQUENCE OF 1-27; 30-42 AND 55-72, AND MASS SPECTROMETRY.
TISSUE=Fetal brain cortex;
Lubec G.,
Chen W.-Q.,
Sun Y.;
Submitted (DEC-2008) to UniProtKB.
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[16]
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NUCLEOTIDE SEQUENCE [MRNA] OF 5-76 (RPS27A).
PubMed=2581967 [NCBI, ExPASy, EBI, Israel, Japan]
Lund P.K.,
Moats-Staats B.M.,
Simmons J.G.,
Hoyt E.,
D'Ercole A.J.,
Martin F.,
van Wyk J.J.;
"Nucleotide sequence analysis of a cDNA encoding human ubiquitin reveals that ubiquitin is synthesized as a precursor.";
J. Biol. Chem. 260:7609-7613(1985).
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[17]
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PROTEIN SEQUENCE OF 1-74.
DOI=10.1038/255423a0; PubMed=124018 [NCBI, ExPASy, EBI, Israel, Japan]
Schlesinger D.H.,
Goldstein G.;
"Hybrid troponin reconstituted from vertebrate and arthropod subunits.";
Nature 255:423-424(1975).
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[18]
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PROTEIN SEQUENCE OF 1-27 AND 43-54, UBIQUITINATION AT LYS-6; LYS-11 AND LYS-48, AND MASS SPECTROMETRY.
DOI=10.1074/jbc.M512786200; PubMed=16443603 [NCBI, ExPASy, EBI, Israel, Japan]
Cripps D.,
Thomas S.N.,
Jeng Y.,
Yang F.,
Davies P.,
Yang A.J.;
"Alzheimer disease-specific conformation of hyperphosphorylated paired helical filament-tau is polyubiquitinated through Lys-48, Lys-11, and Lys-6 ubiquitin conjugation.";
J. Biol. Chem. 281:10825-10838(2006).
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[19]
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UBIQUITINATION AT LYS-27.
DOI=10.1074/jbc.M402916200; PubMed=15466860 [NCBI, ExPASy, EBI, Israel, Japan]
Okumura F.,
Hatakeyama S.,
Matsumoto M.,
Kamura T.,
Nakayama K.;
"Functional regulation of FEZ1 by the U-box-type ubiquitin ligase E4B contributes to neuritogenesis.";
J. Biol. Chem. 279:53533-53543(2004).
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[20]
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PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-65, AND MASS SPECTROMETRY.
TISSUE=Epithelium;
DOI=10.1016/j.cell.2006.09.026; PubMed=17081983 [NCBI, ExPASy, EBI, Israel, Japan]
Olsen J.V.,
Blagoev B.,
Gnad F.,
Macek B.,
Kumar C.,
Mortensen P.,
Mann M.;
"Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.";
Cell 127:635-648(2006).
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[21]
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FUNCTION, UBIQUITINATION AT LYS-11; LYS-29; LYS-48 AND LYS-63, AND MASS SPECTROMETRY.
DOI=10.1016/j.molcel.2006.02.018; PubMed=16543144 [NCBI, ExPASy, EBI, Israel, Japan]
Huang F.,
Kirkpatrick D.,
Jiang X.,
Gygi S.P.,
Sorkin A.;
"Differential regulation of EGF receptor internalization and degradation by multiubiquitination within the kinase domain.";
Mol. Cell 21:737-748(2006).
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[22]
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UBIQUITINATION [LARGE SCALE ANALYSIS] AT LYS-48, AND MASS SPECTROMETRY.
DOI=10.1021/bi061994u; PubMed=17323924 [NCBI, ExPASy, EBI, Israel, Japan]
Wang X.,
Chen C.-F.,
Baker P.R.,
Chen P.-L.,
Kaiser P.,
Huang L.;
"Mass spectrometric characterization of the affinity-purified human 26S proteasome complex.";
Biochemistry 46:3553-3565(2007).
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[23]
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UBIQUITINATION [LARGE SCALE ANALYSIS] AT LYS-48, AND MASS SPECTROMETRY.
TISSUE=Lung adenocarcinoma;
DOI=10.1021/pr060438j; PubMed=17203973 [NCBI, ExPASy, EBI, Israel, Japan]
Vasilescu J.,
Zweitzig D.R.,
Denis N.J.,
Smith J.C.,
Ethier M.,
Haines D.S.,
Figeys D.;
"The proteomic reactor facilitates the analysis of affinity-purified proteins by mass spectrometry: application for identifying ubiquitinated proteins in human cells.";
J. Proteome Res. 6:298-305(2007).
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[24]
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IDENTIFICATION [LARGE SCALE ANALYSIS], AND MASS SPECTROMETRY.
Colinge J.,
Superti-Furga G.,
Bennett K.L.;
Submitted (OCT-2008) to UniProtKB.
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[25]
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X-RAY CRYSTALLOGRAPHY (1.8 ANGSTROMS).
DOI=10.1016/0022-2836(87)90679-6; PubMed=3041007 [NCBI, ExPASy, EBI, Israel, Japan]
Vijay-Kumar S.,
Bugg C.E.,
Cook W.J.;
"Structure of ubiquitin refined at 1.8-A resolution.";
J. Mol. Biol. 194:531-544(1987).
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[26]
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X-RAY CRYSTALLOGRAPHY (1.8 ANGSTROMS).
PubMed=8166633 [NCBI, ExPASy, EBI, Israel, Japan]
Ramage R.,
Green J.,
Muir T.W.,
Ogunjobi O.M.,
Love S.,
Shaw K.;
"Synthetic, structural and biological studies of the ubiquitin system: the total chemical synthesis of ubiquitin.";
Biochem. J. 299:151-158(1994).
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[27]
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X-RAY CRYSTALLOGRAPHY (1.8 ANGSTROMS).
DOI=10.1006/jmbi.1994.1169; PubMed=8107144 [NCBI, ExPASy, EBI, Israel, Japan]
Cook W.J.,
Jeffrey L.C.,
Kasperek E.,
Pickart C.M.;
"Structure of tetraubiquitin shows how multiubiquitin chains can be formed.";
J. Mol. Biol. 236:601-609(1994).
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[28]
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X-RAY CRYSTALLOGRAPHY (2.7 ANGSTROMS).
DOI=10.1107/S090744490001800X; PubMed=11173499 [NCBI, ExPASy, EBI, Israel, Japan]
Phillips C.L.,
Thrower J.,
Pickart C.M.,
Hill C.P.;
"Structure of a new crystal form of tetraubiquitin.";
Acta Crystallogr. D 57:341-344(2001).
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[29]
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X-RAY CRYSTALLOGRAPHY (2.3 ANGSTROMS) OF 1-75 IN COMPLEX WITH USP7.
DOI=10.1016/S0092-8674(02)01199-6; PubMed=12507430 [NCBI, ExPASy, EBI, Israel, Japan]
Hu M.,
Li P.,
Li M.,
Li W.,
Yao T.,
Wu J.-W.,
Gu W.,
Cohen R.E.,
Shi Y.;
"Crystal structure of a UBP-family deubiquitinating enzyme in isolation and in complex with ubiquitin aldehyde.";
Cell 111:1041-1054(2002).
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