[1]
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NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Leukemic T-cell;
PubMed=3297675 [NCBI, ExPASy, EBI, Israel, Japan]
Haendler B.,
Hofer-Warbinek R.,
Hofer E.;
"Complementary DNA for human T-cell cyclophilin.";
EMBO J. 6:947-950(1987).
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[2]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1111/j.1432-1033.1990.tb15598.x; PubMed=2197089 [NCBI, ExPASy, EBI, Israel, Japan]
Haendler B.,
Hofer E.;
"Characterization of the human cyclophilin gene and of related processed pseudogenes.";
Eur. J. Biochem. 190:477-482(1990).
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[3]
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NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Ebert L.,
Schick M.,
Neubert P.,
Schatten R.,
Henze S.,
Korn B.;
"Cloning of human full open reading frames in Gateway(TM) system entry vector (pDONR201).";
Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
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[4]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA].
NIEHS SNPs program;
Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases.
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[5]
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NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Bone marrow, Brain, Cervix, Colon, Lung, Skeletal muscle, Skin, and Urinary bladder;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
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[6]
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PROTEIN SEQUENCE OF 2-30.
PubMed=7657784 [NCBI, ExPASy, EBI, Israel, Japan]
Meier U.,
Beier-Hellwig K.,
Klug J.,
Linder D.,
Beier H.M.;
"Identification of cyclophilin A from human decidual and placental tissue in the first trimester of pregnancy.";
Hum. Reprod. 10:1305-1310(1995).
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[7]
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PROTEIN SEQUENCE OF 2-19.
TISSUE=Platelet;
DOI=10.1038/nbt810; PubMed=12665801 [NCBI, ExPASy, EBI, Israel, Japan]
Gevaert K.,
Goethals M.,
Martens L.,
Van Damme J.,
Staes A.,
Thomas G.R.,
Vandekerckhove J.;
"Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides.";
Nat. Biotechnol. 21:566-569(2003).
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[8]
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PROTEIN SEQUENCE OF 2-31; 56-69; 77-118; 132-144 AND 155-165, AND MASS SPECTROMETRY.
TISSUE=Brain, Cajal-Retzius cell, and Fetal brain cortex;
Lubec G.,
Afjehi-Sadat L.,
Chen W.-Q.,
Sun Y.;
Submitted (DEC-2008) to UniProtKB.
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[9]
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PROTEIN SEQUENCE OF 2-28, CLEAVAGE OF INITIATOR METHIONINE, ACETYLATION AT VAL-2, AND MASS SPECTROMETRY.
TISSUE=Platelet;
Bienvenut W.V.,
Claeys D.;
Submitted (NOV-2005) to UniProtKB.
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[10]
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MUTAGENESIS OF TRP-121.
DOI=10.1021/bi00223a003; PubMed=2001362 [NCBI, ExPASy, EBI, Israel, Japan]
Liu J.,
Chen C.-M.,
Walsh C.T.;
"Human and Escherichia coli cyclophilins: sensitivity to inhibition by the immunosuppressant cyclosporin A correlates with a specific tryptophan residue.";
Biochemistry 30:2306-2310(1991).
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[11]
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INTERACTION WITH HIV-1 CAPSID PROTEIN.
DOI=10.1016/0092-8674(93)90637-6; PubMed=8513493 [NCBI, ExPASy, EBI, Israel, Japan]
Luban J.,
Bossolt K.L.,
Franke E.K.,
Kalpana G.V.,
Goff S.P.;
"Human immunodeficiency virus type 1 Gag protein binds to cyclophilins A and B.";
Cell 73:1067-1078(1993).
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[12]
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PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-157, AND MASS SPECTROMETRY.
TISSUE=Hepatocyte;
DOI=10.1002/pmic.200401217; PubMed=16097034 [NCBI, ExPASy, EBI, Israel, Japan]
Gevaert K.,
Staes A.,
Van Damme J.,
De Groot S.,
Hugelier K.,
Demol H.,
Martens L.,
Goethals M.,
Vandekerckhove J.;
"Global phosphoproteome analysis on human HepG2 hepatocytes using reversed-phase diagonal LC.";
Proteomics 5:3589-3599(2005).
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[13]
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ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-125, AND MASS SPECTROMETRY.
TISSUE=Epithelium;
DOI=10.1016/j.molcel.2006.06.026; PubMed=16916647 [NCBI, ExPASy, EBI, Israel, Japan]
Kim S.C.,
Sprung R.,
Chen Y.,
Xu Y.,
Ball H.,
Pei J.,
Cheng T.,
Kho Y.,
Xiao H.,
Xiao L.,
Grishin N.V.,
White M.,
Yang X.-J.,
Zhao Y.;
"Substrate and functional diversity of lysine acetylation revealed by a proteomics survey.";
Mol. Cell 23:607-618(2006).
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[14]
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UBIQUITINATION [LARGE SCALE ANALYSIS] AT LYS-28, AND MASS SPECTROMETRY.
DOI=10.1021/pr800468j; PubMed=18781797 [NCBI, ExPASy, EBI, Israel, Japan]
Meierhofer D.,
Wang X.,
Huang L.,
Kaiser P.;
"Quantitative analysis of global ubiquitination in HeLa cells by mass spectrometry.";
J. Proteome Res. 7:4566-4576(2008).
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[15]
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IDENTIFICATION [LARGE SCALE ANALYSIS], AND MASS SPECTROMETRY.
Colinge J.,
Superti-Furga G.,
Bennett K.L.;
Submitted (OCT-2008) to UniProtKB.
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[16]
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X-RAY CRYSTALLOGRAPHY (2.6 ANGSTROMS), AND STRUCTURE BY NMR.
DOI=10.1038/353276a0; PubMed=1896075 [NCBI, ExPASy, EBI, Israel, Japan]
Kallen J.,
Spitzfaden C.,
Zurini M.G.M.,
Wider G.,
Widmer H.,
Wuethrich K.,
Walkinshaw M.D.;
"Structure of human cyclophilin and its binding site for cyclosporin A determined by X-ray crystallography and NMR spectroscopy.";
Nature 353:276-279(1991).
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[17]
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X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS).
DOI=10.1073/pnas.88.21.9483; PubMed=1946361 [NCBI, ExPASy, EBI, Israel, Japan]
Ke H.,
Zydowsky L.D.,
Liu J.,
Walsh C.T.;
"Crystal structure of recombinant human T-cell cyclophilin A at 2.5-A resolution.";
Proc. Natl. Acad. Sci. U.S.A. 88:9483-9487(1991).
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[18]
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X-RAY CRYSTALLOGRAPHY (2.8 ANGSTROMS) OF COMPLEX WITH CYCLOPHILIN.
DOI=10.1038/361091a0; PubMed=8421501 [NCBI, ExPASy, EBI, Israel, Japan]
Pfuegl G.,
Kallen J.,
Schirmer T.,
Jansonius J.N.,
Zurini M.G.M.,
Walkinshaw M.D.;
"X-ray structure of a decameric cyclophilin-cyclosporin crystal complex.";
Nature 361:91-94(1993).
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[19]
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X-RAY CRYSTALLOGRAPHY (2.1 ANGSTROMS).
DOI=10.1006/jmbi.1993.1664; PubMed=8263916 [NCBI, ExPASy, EBI, Israel, Japan]
Mikol V.,
Kallen J.,
Pfluegl G.,
Walkinshaw M.D.;
"X-ray structure of a monomeric cyclophilin A-cyclosporin A crystal complex at 2.1-A resolution.";
J. Mol. Biol. 234:1119-1130(1993).
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[20]
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X-RAY CRYSTALLOGRAPHY (2.4 ANGSTROMS).
DOI=10.1021/bi9602775; PubMed=8652511 [NCBI, ExPASy, EBI, Israel, Japan]
Zhao Y.,
Ke H.;
"Crystal structure implies that cyclophilin predominantly catalyzes the trans to cis isomerization.";
Biochemistry 35:7356-7361(1996).
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[21]
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X-RAY CRYSTALLOGRAPHY (1.58 ANGSTROMS).
PubMed=9385632 [NCBI, ExPASy, EBI, Israel, Japan]
Vajdos F.F.,
Yoo S.,
Houseweart M.,
Sundquist W.I.,
Hill C.P.;
"Crystal structure of cyclophilin A complexed with a binding site peptide from the HIV-1 capsid protein.";
Protein Sci. 6:2297-2307(1997).
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[22]
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X-RAY CRYSTALLOGRAPHY (1.8 ANGSTROMS).
DOI=10.1006/jmbi.1998.2108; PubMed=9769216 [NCBI, ExPASy, EBI, Israel, Japan]
Kallen J.,
Mikol V.,
Taylor P.,
Walkinshaw M.D.;
"X-ray structures and analysis of 11 cyclosporin derivatives complexed with cyclophilin A.";
J. Mol. Biol. 283:435-449(1998).
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[23]
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X-RAY CRYSTALLOGRAPHY (2.8 ANGSTROMS) IN COMPLEX WITH CALCINEURIN B.
DOI=10.1073/pnas.192206699; PubMed=12218175 [NCBI, ExPASy, EBI, Israel, Japan]
Huai Q.,
Kim H.Y.,
Liu Y.,
Zhao Y.,
Mondragon A.,
Liu J.O.,
Ke H.;
"Crystal structure of calcineurin-cyclophilin-cyclosporin shows common but distinct recognition of immunophilin-drug complexes.";
Proc. Natl. Acad. Sci. U.S.A. 99:12037-12042(2002).
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[24]
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X-RAY CRYSTALLOGRAPHY (3.1 ANGSTROMS) IN COMPLEX WITH CALCINEURIN B.
DOI=10.1073/pnas.212504399; PubMed=12357034 [NCBI, ExPASy, EBI, Israel, Japan]
Jin L.,
Harrison S.C.;
"Crystal structure of human calcineurin complexed with cyclosporin A and human cyclophilin.";
Proc. Natl. Acad. Sci. U.S.A. 99:13522-13526(2002).
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[25]
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STRUCTURE BY NMR OF COMPLEX WITH CYCLOPHILIN.
DOI=10.1038/361088a0; PubMed=8421500 [NCBI, ExPASy, EBI, Israel, Japan]
Theriault Y.,
Logan T.M.,
Meadows R.,
Yu L.,
Olejniczak E.T.,
Holzman T.F.,
Simmer R.L.,
Fesik S.W.;
"Solution structure of the cyclosporin A/cyclophilin complex by NMR.";
Nature 361:88-91(1993).
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[26]
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STRUCTURE BY NMR.
DOI=10.1006/jmbi.1997.1220; PubMed=9299338 [NCBI, ExPASy, EBI, Israel, Japan]
Ottiger M.,
Zerbe O.,
Guentert P.,
Wuethrich K.;
"The NMR solution conformation of unligated human cyclophilin A.";
J. Mol. Biol. 272:64-81(1997).
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