ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry P61602


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name NCALD_BOVIN
Primary accession number P61602
Secondary accession numbers A1L533 P29554 Q0IIL3 Q9H0W2
Integrated into Swiss-Prot on May 24, 2004
Sequence was last modified on January 23, 2007 (Sequence version 2)
Annotations were last modified on    July 22, 2008 (Entry version 46)
Name and origin of the protein
Protein name Neurocalcin-delta
Synonyms None
Gene name
Name: NCALD
From
Bos taurus (Bovine) [TaxID: 9913] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], AND PROTEIN SEQUENCE OF 107-112 AND 121-126.
TISSUE=Brain;
DOI=10.1016/S0006-291X(05)80968-4; PubMed=1599450 [NCBI, ExPASy, EBI, Israel, Japan]
Okazaki K., Watanabe M., Ando Y., Hagiwara M., Terasawa M., Hidaka H.;
"Full sequence of neurocalcin, a novel calcium-binding protein abundant in central nervous system.";
Biochem. Biophys. Res. Commun. 185:147-153(1992).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Brain;
DOI=10.1016/0168-0102(93)90074-Z; PubMed=8387172 [NCBI, ExPASy, EBI, Israel, Japan]
Hidaka H., Okazaki K.;
"Neurocalcin family: a novel calcium-binding protein abundant in bovine central nervous system.";
Neurosci. Res. 16:73-77(1993).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
DOI=10.1186/1471-2164-6-166; PubMed=16305752 [NCBI, ExPASy, EBI, Israel, Japan]
Harhay G.P., Sonstegard T.S., Keele J.W., Heaton M.P., Clawson M.L., Snelling W.M., Wiedmann R.T., Van Tassell C.P., Smith T.P.L.;
"Characterization of 954 bovine full-CDS cDNA sequences.";
BMC Genomics 6:166-166(2005).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=Hereford;
TISSUE=Thalamus;
NIH - Mammalian Gene Collection (MGC) project;
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[5]
CALCIUM-BINDING DATA.
PubMed=7852401 [NCBI, ExPASy, EBI, Israel, Japan]
Ladant D.;
"Calcium and membrane binding properties of bovine neurocalcin delta expressed in Escherichia coli.";
J. Biol. Chem. 270:3179-3185(1995).
[6]
CRYSTALLIZATION.
DOI=10.1002/(SICI)1097-0134(199606)25:2<261::AID-PROT11>3.0.CO;2-H; PubMed=8811741 [NCBI, ExPASy, EBI, Israel, Japan]
Kumar V.D., Hidaka H., Okazaki K., Vijay-Kumar S.;
"Crystallization and preliminary X-ray crystallographic studies of recombinant bovine neurocalcin delta.";
Proteins 25:261-264(1996).
[7]
X-RAY CRYSTALLOGRAPHY (2.4 ANGSTROMS).
DOI=10.1038/4956; PubMed=9886296 [NCBI, ExPASy, EBI, Israel, Japan]
Vijay-Kumar S., Kumar V.D.;
"Crystal structure of recombinant bovine neurocalcin.";
Nat. Struct. Biol. 6:80-88(1999).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
D10884; BAA01706.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BT029820; ABM06083.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC122588; AAI22589.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR JH0616; JH0616.
RefSeq NP_776823.1; -.
UniGene Bt.65801
3D structure databases
PDB
1BJF; X-ray; 2.40 A; A/B=1-193.[ExPASy / RCSB / EBI]
PDBsum 1BJF; -.
ModBase P61602.
Protein-protein interaction databases
IntAct P61602; -.
Ontologies
GO
GO:0003779; Molecular function: actin binding (inferred from sequence or structural similarity from UniProtKB).
GO:0005509; Molecular function: calcium ion binding (non-traceable author statement from UniProtKB).
GO:0030276; Molecular function: clathrin binding (inferred from sequence or structural similarity from UniProtKB).
GO:0015631; Molecular function: tubulin binding (inferred from sequence or structural similarity from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR011992; EF-Hand_type.
IPR002048; EF_hand_Ca_bd.
IPR001125; Recoverin.
Graphical view of domain structure.
Gene3D G3DSA:1.10.238.10; EF-Hand_type; 1.
Pfam PF00036; efhand; 3.
Pfam graphical view of domain structure.
PRINTS PR00450; RECOVERIN.
ProDom PD000012; EF-hand; 1.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00054; EFh; 3.
SMART graphical view of domain structure.
PROSITE PS00018; EF_HAND_1; 3.
PS50222; EF_HAND_2; 4.
PROSITE graphical view of domain structure (profiles).
BLOCKS P61602.
Genome annotation databases
Ensembl ENSBTAG00000004259; Bos taurus. [Contig view]
GeneID 281940; -.
KEGG bta:281940; -.
Phylogenomic databases
HOVERGEN P61602; -.
Other
ProtoNet P61602.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Calcium; Direct protein sequencing; Lipoprotein; Myristate; Repeat.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed. 
CHAIN   2   193  192     Neurocalcin-delta. PRO_0000073781
DOMAIN   23    58  36     EF-hand 1. 
DOMAIN   60    95  36     EF-hand 2. 
DOMAIN   96   131  36     EF-hand 3. 
DOMAIN   144   179  36     EF-hand 4. 
CA_BIND   73    84  12     1 (Potential). 
CA_BIND   109   120  12     2 (Potential). 
CA_BIND   157   168  12     3 (Potential). 
LIPID   2     2        N-myristoyl glycine. 
HELIX   10    19  10      
HELIX   24    37  14      
STRAND   41    44  4      
HELIX   45    52  8      
TURN   53    55  3      
STRAND   56    59  4      
HELIX   62    72  11      
STRAND   77    81  5      
HELIX   82    92  11      
HELIX   97   108  12      
HELIX   118   129  12      
TURN   135   137  3      
HELIX   140   142  3      
HELIX   145   155  11      
STRAND   161   164  4      
HELIX   166   175  10      
HELIX   178   181  4      
Sequence information
Length: 193 AA [This is the length of the unprocessed precursor] Molecular weight: 22245 Da [This is the MW of the unprocessed precursor] CRC64: 20DD8B6FF47C4CBF [This is a checksum on the sequence]
        10         20         30         40         50         60 
MGKQNSKLRP EVMQDLLEST DFTEHEIQEW YKGFLRDCPS GHLSMEEFKK IYGNFFPYGD 

        70         80         90        100        110        120 
ASKFAEHVFR TFDANGDGTI DFREFIIALS VTSRGKLEQK LKWAFSMYDL DGNGYISKAE 

       130        140        150        160        170        180 
MLEIVQAIYK MVSSVMKMPE DESTPEKRTE KIFRQMDTNR DGKLSLEEFI RGAKSDPSIV 

       190 
RLLQCDPSSA GQF 

P61602 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
 Hosted by ch flag SIB Switzerland Mirror sites: Australia  Brazil  Canada  China  Korea
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!