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UniProtKB/Swiss-Prot entry P56975


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name NRG3_HUMAN
Primary accession number P56975
Secondary accession numbers A4D7U1 Q0PEH2 Q5VYH3
Integrated into Swiss-Prot on December 1, 2000
Sequence was last modified on December 1, 2000 (Sequence version 1)
Annotations were last modified on    June 16, 2009 (Entry version 74)
Name and origin of the protein
Protein name Pro-neuregulin-3, membrane-bound isoform [Precursor]
Synonym Pro-NRG3
Contains Neuregulin-3
     (NRG-3)
Gene name
Name: NRG3
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), AND FUNCTION.
TISSUE=Fetal brain;
DOI=10.1073/pnas.94.18.9562; PubMed=9275162 [NCBI, ExPASy, EBI, Israel, Japan]
Zhang D., Sliwkowski M.X., Mark M., Frantz G., Akita R., Sun Y., Hillan K., Crowley C., Brush J., Godowski P.J.;
"Neuregulin-3 (NRG3): a novel neural tissue-enriched protein that binds and activates ErbB4.";
Proc. Natl. Acad. Sci. U.S.A. 94:9562-9567(1997).
[2]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 3), DEVELOPMENTAL STAGE, SUBCELLULAR LOCATION, GLYCOSYLATION, AND FUNCTION.
TISSUE=Fetal brain;
DOI=10.1242/jcs.02799; PubMed=16478787 [NCBI, ExPASy, EBI, Israel, Japan]
Carteron C., Ferrer-Montiel A.V., Cabedo H.;
"Characterization of a neural-specific splicing form of the human neuregulin 3 gene involved in oligodendrocyte survival.";
J. Cell Sci. 119:898-909(2006).
[3]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 4).
Tiao J.Y., Busfield S.J.;
"Bi-directional signalling by NRG-3 cytoplasmic domain.";
Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1038/nature02462; PubMed=15164054 [NCBI, ExPASy, EBI, Israel, Japan]
Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J., Bird C.P., Ainscough R., Almeida J.P., Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., Durbin R.M., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.;
"The DNA sequence and comparative analysis of human chromosome 10.";
Nature 429:375-381(2004).
[5]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-116 AND SER-119, AND MASS SPECTROMETRY.
DOI=10.2116/analsci.24.161; PubMed=18187866 [NCBI, ExPASy, EBI, Israel, Japan]
Imami K., Sugiyama N., Kyono Y., Tomita M., Ishihama Y.;
"Automated phosphoproteome analysis for cultured cancer cells by two-dimensional nanoLC-MS using a calcined titania/C18 biphasic column.";
Anal. Sci. 24:161-166(2008).
Comments
  • FUNCTION: Direct ligand for the ERBB4 tyrosine kinase receptor. Binding results in ligand-stimulated tyrosine phosphorylation and activation of the receptor. Does not bind to the EGF receptor, ERBB2 or ERBB3 receptors. May be a survival factor for oligodendrocytes.
  • SUBCELLULAR LOCATION: Pro-neuregulin-3, membrane-bound isoform: Cell membrane; Single-pass type I membrane protein (By similarity). Note=Does not seem to be active (By similarity).
  • SUBCELLULAR LOCATION: Neuregulin-3: Secreted (By similarity).
  • SUBCELLULAR LOCATION: Isoform 3: Cell membrane; Single-pass type I membrane protein. Note=Isoform 3 is also proteolytically released as a soluble form.
  • ALTERNATIVE PRODUCTS: 4 named isoforms [FASTA] produced by alternative splicing.
    Name1
    Isoform IDP56975-1
    This is the isoform sequence displayed in this entry.
    Name2
    Isoform IDP56975-2
    Features which should be applied to build the isoform sequence: VSP_021830.
    Name3
    SynonymsFBNRG3
    Isoform IDP56975-3
    Features which should be applied to build the isoform sequence: VSP_021828, VSP_021829.
    Name4
    Isoform IDP56975-4
    Features which should be applied to build the isoform sequence: VSP_035752.
  • TISSUE SPECIFICITY: Highly expressed in most regions of the brain with the exception of corpus callosum. Expressed at lower level in testis. Not detected in heart, placenta, lung, liver, skeletal muscle, kidney, pancreas, spleen, thymus, prostate, ovary, small intestine, colon and peripheral blood leukocytes.
  • DEVELOPMENTAL STAGE: Isoform 3 is expressed in fetal brain but not in other fetal tissues.
  • DOMAIN: The cytoplasmic domain may be involved in the regulation of trafficking and proteolytic processing. Regulation of the proteolytic processing involves initial intracellular domain dimerization (By similarity).
  • DOMAIN: ERBB receptor binding is elicited entirely by the EGF-like domain (By similarity).
  • PTM: Proteolytic cleavage close to the plasma membrane on the external face leads to the release of the soluble growth factor form.
  • PTM: Extensive glycosylation precedes the proteolytic cleavage (By similarity). Isoform 3 is glycosylated.
  • SIMILARITY: Belongs to the neuregulin family.
  • SIMILARITY: Contains 1 EGF-like domain.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
DQ857894; ABG77979.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
DQ001411; AAY17216.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL354749; CAH70641.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL096706; CAH70641.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL136085; CAH70641.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL391478; CAH70641.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL513204; CAH70641.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL589782; CAH70641.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL136085; CAH71050.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL096706; CAH71050.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL354749; CAH71050.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL391478; CAH71050.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL513204; CAH71050.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL589782; CAH71050.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL513204; CAH73645.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL096706; CAH73645.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL136085; CAH73645.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL354749; CAH73645.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL391478; CAH73645.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL589782; CAH73645.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL391478; CAI15622.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL096706; CAI15622.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL136085; CAI15622.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL354749; CAI15622.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL513204; CAI15622.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL589782; CAI15622.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL589782; CAI17213.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL096706; CAI17213.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL136085; CAI17213.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL354749; CAI17213.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL391478; CAI17213.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL513204; CAI17213.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL096706; CAI22410.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL136085; CAI22410.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL354749; CAI22410.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL391478; CAI22410.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL513204; CAI22410.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL589782; CAI22410.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00012044; -.
IPI00749451; -.
IPI00807378; -.
IPI00914901; -.
UniGene Hs.125119
3D structure databases
HSSP P01133; 1JL9. [HSSP ENTRY / PDB]
ModBase P56975.
PTM databases
PhosphoSite P56975; -.
Organism-specific databases
GeneCards GC10P083625; -.
HGNC HGNC:7999; NRG3.
GenAtlas NRG3.
MIM 605533; gene. [NCBI / EBI]
PharmGKB PA31778; -.
Gene expression databases
ArrayExpress P56975; -.
Bgee P56975; -.
CleanEx HS_NRG3; -.
GermOnline ENSG00000185737; Homo sapiens.
Ontologies
GO
GO:0005576; Cellular component: extracellular region (non-traceable author statement from UniProtKB).
GO:0005887; Cellular component: integral to plasma membrane (non-traceable author statement from UniProtKB).
GO:0008083; Molecular function: growth factor activity (non-traceable author statement from UniProtKB).
GO:0030971; Molecular function: receptor tyrosine kinase binding (non-traceable author statement from UniProtKB).
GO:0030297; Molecular function: transmembrane receptor protein tyrosine kinase activator activity (non-traceable author statement from UniProtKB).
GO:0009790; Biological process: embryonic development (inferred from electronic annotation from InterPro).
GO:0001558; Biological process: regulation of cell growth (non-traceable author statement from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR006209; EGF.
IPR006210; EGF-like.
IPR013032; EGF-like_reg_CS.
IPR000742; EGF_3.
IPR002154; Neuregulin_1_C.
Graphical view of domain structure.
Pfam PF00008; EGF; 1.
PF02158; Neuregulin; 1.
Pfam graphical view of domain structure.
SMART SM00181; EGF; 1.
SMART graphical view of domain structure.
PROSITE PS00022; EGF_1; 1.
PS01186; EGF_2; 1.
PS50026; EGF_3; 1.
PROSITE graphical view of domain structure (profiles).
Proteomic databases
PRIDE P56975; -.
Genome annotation databases
Ensembl ENSG00000185737; Homo sapiens. [Contig view]
KEGG hsa:10718; -.
Phylogenomic databases
HOGENOM P56975; -.
HOVERGEN P56975; -.
Other
SOURCE NRG3; Homo sapiens.
ProtoNet P56975.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Alternative splicing; Cell membrane; Disulfide bond; EGF-like domain; Glycoprotein; Growth factor; Membrane; Phosphoprotein; Polymorphism; Secreted; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   720  720     Pro-neuregulin-3, membrane-bound isoform. PRO_0000019481
CHAIN   1   359  359     Neuregulin-3. PRO_0000019482
TOPO_DOM   1   360  360     Extracellular (Potential). 
TRANSMEM   361   381  21     Internal signal sequence (Potential). 
TOPO_DOM   382   720  339     Cytoplasmic (Potential). 
DOMAIN   286   329  44     EGF-like. 
COMPBIAS   5     8  4     Poly-Ala. 
COMPBIAS   13    21  9     Poly-Ala. 
COMPBIAS   26    34  9     Poly-Ala. 
COMPBIAS   105   285  181     Ser/Thr-rich. 
COMPBIAS   127   135  9     Poly-Thr. 
COMPBIAS   252   260  9     Poly-Ser. 
COMPBIAS   262   265  4     Poly-Thr. 
MOD_RES   116   116        Phosphoserine. 
MOD_RES   119   119        Phosphoserine. 
DISULFID   290   304        By similarity. 
DISULFID   298   317        By similarity. 
DISULFID   319   328        By similarity. 
VAR_SEQ   1   221        Missing (in isoform 3). VSP_021828
VAR_SEQ   222   275        PSWPTAAYATSSYLHDSTPSWTLSPFQDAASSSSSSSSSA TTTTPETSTSPKFH -> MECGIPPTLVCVGRGGGLHTINIIIWYYFPSAWRTCFNIS SSVGLLLTNSYKFY (in isoform 3). VSP_021829
VAR_SEQ   471   477        Missing (in isoform 2). VSP_021830
VAR_SEQ   529   552        Missing (in isoform 4). VSP_035752
VARIANT   472   472  1     S -> R (in dbSNP:rs2295934 [NCBI]). VAR_047386 
VARIANT   552   552  1     K -> N (in dbSNP:rs17101193 [NCBI]). VAR_047387 
VARIANT   576   576  1     N -> K (in dbSNP:rs17101193 [NCBI]). VAR_057655 
Sequence information
Length: 720 AA [This is the length of the unprocessed precursor] Molecular weight: 77901 Da [This is the MW of the unprocessed precursor] CRC64: A4D6F10DDB95A693 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSEGAAAASP PGAASAAAAS AEEGTAAAAA AAAAGGGPDG GGEGAAEPPR ELRCSDCIVW 

        70         80         90        100        110        120 
NRQQTWLCVV PLFIGFIGLG LSLMLLKWIV VGSVKEYVPT DLVDSKGMGQ DPFFLSKPSS 

       130        140        150        160        170        180 
FPKAMETTTT TTSTTSPATP SAGGAASSRT PNRISTRLTT ITRAPTRFPG HRVPIRASPR 

       190        200        210        220        230        240 
STTARNTAAP ATVPSTTAPF FSSSTLGSRP PVPGTPSTQA MPSWPTAAYA TSSYLHDSTP 

       250        260        270        280        290        300 
SWTLSPFQDA ASSSSSSSSS ATTTTPETST SPKFHTTTYS TERSEHFKPC RDKDLAYCLN 

       310        320        330        340        350        360 
DGECFVIETL TGSHKHCRCK EGYQGVRCDQ FLPKTDSILS DPTDHLGIEF MESEEVYQRQ 

       370        380        390        400        410        420 
VLSISCIIFG IVIVGMFCAA FYFKSKKQAK QIQEQLKVPQ NGKSYSLKAS STMAKSENLV 

       430        440        450        460        470        480 
KSHVQLQNYS KVERHPVTAL EKMMESSFVG PQSFPEVPSP DRGSQSVKHH RSLSSCCSPG 

       490        500        510        520        530        540 
QRSGMLHRNA FRRTPPSPRS RLGGIVGPAY QQLEESRIPD QDTIPCQGIE VRKTISHLPI 

       550        560        570        580        590        600 
QLWCVERPLD LKYSSSGLKT QRNTSINMQL PSRETNPYFN SLEQKDLVGY SSTRASSVPI 

       610        620        630        640        650        660 
IPSVGLEETC LQMPGISEVK SIKWCKNSYS ADVVNVSIPV SDCLIAEQQE VKILLETVQE 

       670        680        690        700        710        720 
QIRILTDARR SEDYELASVE TEDSASENTA FLPLSPTAKS EREAQFVLRN EIQRDSALTK 

P56975 in FASTA format

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